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Genes within 1Mb (chr1:43170522:T:TCACA):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000065978 YBX1 488104 sc-eQTL 9.11e-01 0.0172 0.153 0.051 pDC L2
ENSG00000066135 KDM4A -479627 sc-eQTL 3.29e-01 -0.216 0.221 0.051 pDC L2
ENSG00000066322 ELOVL1 -197552 sc-eQTL 7.62e-01 0.0689 0.227 0.051 pDC L2
ENSG00000117385 P3H1 403438 sc-eQTL 4.39e-01 -0.191 0.247 0.051 pDC L2
ENSG00000117394 SLC2A1 211654 sc-eQTL 9.76e-01 0.00484 0.158 0.051 pDC L2
ENSG00000117395 EBNA1BP2 -100414 sc-eQTL 3.77e-01 -0.201 0.227 0.051 pDC L2
ENSG00000117408 IPO13 -776428 sc-eQTL 1.02e-01 -0.373 0.227 0.051 pDC L2
ENSG00000117410 ATP6V0B -803965 sc-eQTL 4.46e-01 -0.121 0.158 0.051 pDC L2
ENSG00000126091 ST3GAL3 -535302 sc-eQTL 8.48e-01 -0.0415 0.216 0.051 pDC L2
ENSG00000127125 PPCS 714405 sc-eQTL 4.63e-01 0.162 0.22 0.051 pDC L2
ENSG00000132768 DPH2 -799478 sc-eQTL 6.27e-01 -0.106 0.218 0.051 pDC L2
ENSG00000159214 CCDC24 -820837 sc-eQTL 3.02e-01 0.201 0.194 0.051 pDC L2
ENSG00000159479 MED8 -219286 sc-eQTL 5.48e-01 0.12 0.2 0.051 pDC L2
ENSG00000164008 C1orf50 403273 sc-eQTL 1.32e-01 -0.352 0.232 0.051 pDC L2
ENSG00000164010 ERMAP 353400 sc-eQTL 7.96e-01 -0.0568 0.22 0.051 pDC L2
ENSG00000164011 ZNF691 323949 sc-eQTL 4.53e-01 0.139 0.185 0.051 pDC L2
ENSG00000171960 PPIH 512099 sc-eQTL 1.46e-01 0.32 0.219 0.051 pDC L2
ENSG00000177868 SVBP 353125 sc-eQTL 7.26e-02 -0.407 0.225 0.051 pDC L2
ENSG00000178922 HYI -283467 sc-eQTL 1.42e-01 0.262 0.177 0.051 pDC L2
ENSG00000186409 CCDC30 707301 sc-eQTL 4.48e-01 0.147 0.193 0.051 pDC L2
ENSG00000198198 SZT2 -219360 sc-eQTL 7.52e-02 0.396 0.221 0.051 pDC L2
ENSG00000198815 FOXJ3 834645 sc-eQTL 5.17e-01 0.164 0.252 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066056 TIE1 -130460 pQTL 0.0433 0.183 0.0903 0.0 0.0 0.0278
ENSG00000164010 ERMAP 353400 eQTL 3.96e-02 -0.115 0.0558 0.00128 0.0 0.028
ENSG00000198815 FOXJ3 834645 pQTL 0.00101 0.156 0.0474 0.00422 0.00347 0.0278
ENSG00000227533 SLC2A1-AS1 211473 eQTL 0.0375 0.25 0.12 0.0 0.0 0.028

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina