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Genes within 1Mb (chr1:41654173:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000010803 SCMH1 412019 sc-eQTL 7.17e-01 0.0625 0.172 0.944 B L1
ENSG00000066136 NFYC 962525 sc-eQTL 3.24e-01 0.142 0.144 0.944 B L1
ENSG00000127124 HIVEP3 -381752 sc-eQTL 5.43e-01 0.0902 0.148 0.944 B L1
ENSG00000127125 PPCS -801944 sc-eQTL 6.64e-01 -0.0659 0.152 0.944 B L1
ENSG00000171793 CTPS1 674485 sc-eQTL 1.38e-02 0.315 0.127 0.944 B L1
ENSG00000179862 CITED4 791810 sc-eQTL 3.50e-01 -0.133 0.142 0.944 B L1
ENSG00000186409 CCDC30 -809048 sc-eQTL 3.54e-01 0.163 0.176 0.944 B L1
ENSG00000198815 FOXJ3 -681704 sc-eQTL 2.01e-01 0.17 0.133 0.944 B L1
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 7.88e-01 0.0484 0.18 0.944 B L1
ENSG00000010803 SCMH1 412019 sc-eQTL 7.14e-01 -0.0558 0.152 0.944 CD4T L1
ENSG00000066136 NFYC 962525 sc-eQTL 9.55e-01 -0.0089 0.158 0.944 CD4T L1
ENSG00000127124 HIVEP3 -381752 sc-eQTL 2.24e-01 -0.209 0.172 0.944 CD4T L1
ENSG00000127125 PPCS -801944 sc-eQTL 7.67e-01 -0.0349 0.118 0.944 CD4T L1
ENSG00000171793 CTPS1 674485 sc-eQTL 3.11e-01 0.096 0.0946 0.944 CD4T L1
ENSG00000179862 CITED4 791810 sc-eQTL 4.57e-01 -0.0747 0.1 0.944 CD4T L1
ENSG00000186409 CCDC30 -809048 sc-eQTL 4.41e-01 0.137 0.178 0.944 CD4T L1
ENSG00000198815 FOXJ3 -681704 sc-eQTL 4.22e-01 0.103 0.128 0.944 CD4T L1
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 9.30e-01 0.0155 0.175 0.944 CD4T L1
ENSG00000010803 SCMH1 412019 sc-eQTL 1.67e-01 0.211 0.152 0.944 CD8T L1
ENSG00000066136 NFYC 962525 sc-eQTL 9.48e-01 0.0122 0.186 0.944 CD8T L1
ENSG00000127124 HIVEP3 -381752 sc-eQTL 5.32e-01 -0.0665 0.106 0.944 CD8T L1
ENSG00000127125 PPCS -801944 sc-eQTL 7.73e-01 -0.0454 0.157 0.944 CD8T L1
ENSG00000171793 CTPS1 674485 sc-eQTL 4.96e-01 -0.0768 0.113 0.944 CD8T L1
ENSG00000179862 CITED4 791810 sc-eQTL 9.20e-01 0.0094 0.093 0.944 CD8T L1
ENSG00000186409 CCDC30 -809048 sc-eQTL 9.81e-01 -0.0042 0.177 0.944 CD8T L1
ENSG00000198815 FOXJ3 -681704 sc-eQTL 5.59e-01 0.0774 0.132 0.944 CD8T L1
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 9.28e-01 -0.0193 0.212 0.944 CD8T L1
ENSG00000010803 SCMH1 412019 sc-eQTL 7.27e-01 -0.0619 0.177 0.948 DC L1
ENSG00000066136 NFYC 962525 sc-eQTL 3.14e-02 0.392 0.181 0.948 DC L1
ENSG00000117016 RIMS3 988491 sc-eQTL 6.36e-01 -0.0701 0.148 0.948 DC L1
ENSG00000127124 HIVEP3 -381752 sc-eQTL 1.94e-01 0.246 0.189 0.948 DC L1
ENSG00000127125 PPCS -801944 sc-eQTL 4.08e-01 0.143 0.173 0.948 DC L1
ENSG00000171793 CTPS1 674485 sc-eQTL 8.43e-01 -0.0305 0.153 0.948 DC L1
ENSG00000179862 CITED4 791810 sc-eQTL 8.23e-01 0.0355 0.158 0.948 DC L1
ENSG00000186409 CCDC30 -809048 sc-eQTL 3.27e-01 0.161 0.164 0.948 DC L1
ENSG00000198815 FOXJ3 -681704 sc-eQTL 5.93e-01 -0.107 0.201 0.948 DC L1
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 9.98e-01 -0.000521 0.198 0.948 DC L1
ENSG00000010803 SCMH1 412019 sc-eQTL 9.81e-01 -0.00415 0.17 0.944 Mono L1
ENSG00000066136 NFYC 962525 sc-eQTL 4.85e-01 0.111 0.158 0.944 Mono L1
ENSG00000127124 HIVEP3 -381752 sc-eQTL 6.84e-01 0.0467 0.115 0.944 Mono L1
ENSG00000127125 PPCS -801944 sc-eQTL 1.61e-01 0.17 0.121 0.944 Mono L1
ENSG00000171793 CTPS1 674485 sc-eQTL 7.15e-01 0.0704 0.192 0.944 Mono L1
ENSG00000179862 CITED4 791810 sc-eQTL 2.05e-01 0.165 0.13 0.944 Mono L1
ENSG00000198815 FOXJ3 -681704 sc-eQTL 3.43e-01 0.145 0.153 0.944 Mono L1
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 5.17e-01 -0.118 0.182 0.944 Mono L1
ENSG00000010803 SCMH1 412019 sc-eQTL 5.42e-01 -0.104 0.17 0.944 NK L1
ENSG00000066136 NFYC 962525 sc-eQTL 8.65e-01 -0.028 0.165 0.944 NK L1
ENSG00000127124 HIVEP3 -381752 sc-eQTL 9.13e-02 -0.28 0.165 0.944 NK L1
ENSG00000127125 PPCS -801944 sc-eQTL 2.38e-01 0.18 0.152 0.944 NK L1
ENSG00000171793 CTPS1 674485 sc-eQTL 2.38e-01 -0.147 0.124 0.944 NK L1
ENSG00000179862 CITED4 791810 sc-eQTL 8.73e-01 0.0247 0.154 0.944 NK L1
ENSG00000186409 CCDC30 -809048 sc-eQTL 2.36e-02 -0.432 0.19 0.944 NK L1
ENSG00000198815 FOXJ3 -681704 sc-eQTL 1.84e-01 0.173 0.13 0.944 NK L1
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 7.07e-01 -0.0802 0.213 0.944 NK L1
ENSG00000010803 SCMH1 412019 sc-eQTL 9.03e-01 0.021 0.173 0.944 Other_T L1
ENSG00000066136 NFYC 962525 sc-eQTL 8.72e-01 -0.0275 0.171 0.944 Other_T L1
ENSG00000127124 HIVEP3 -381752 sc-eQTL 6.97e-03 -0.393 0.144 0.944 Other_T L1
ENSG00000127125 PPCS -801944 sc-eQTL 6.80e-02 -0.308 0.168 0.944 Other_T L1
ENSG00000171793 CTPS1 674485 sc-eQTL 6.77e-01 -0.0584 0.14 0.944 Other_T L1
ENSG00000179862 CITED4 791810 sc-eQTL 1.59e-01 -0.225 0.159 0.944 Other_T L1
ENSG00000198815 FOXJ3 -681704 sc-eQTL 4.48e-01 0.132 0.174 0.944 Other_T L1
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 4.72e-01 0.158 0.22 0.944 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000010803 SCMH1 412019 sc-eQTL 2.30e-01 -0.25 0.207 0.944 B_Activated L2
ENSG00000066136 NFYC 962525 sc-eQTL 3.06e-01 0.236 0.23 0.944 B_Activated L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 7.28e-01 0.0771 0.221 0.944 B_Activated L2
ENSG00000127125 PPCS -801944 sc-eQTL 5.07e-01 -0.139 0.209 0.944 B_Activated L2
ENSG00000171793 CTPS1 674485 sc-eQTL 9.02e-01 0.0256 0.208 0.944 B_Activated L2
ENSG00000179862 CITED4 791810 sc-eQTL 3.86e-02 -0.352 0.169 0.944 B_Activated L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 1.83e-01 -0.23 0.172 0.944 B_Activated L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 2.70e-01 -0.246 0.222 0.944 B_Activated L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 2.62e-01 0.217 0.193 0.944 B_Activated L2
ENSG00000010803 SCMH1 412019 sc-eQTL 6.86e-01 -0.0801 0.198 0.944 B_Intermediate L2
ENSG00000066136 NFYC 962525 sc-eQTL 6.20e-01 -0.0914 0.184 0.944 B_Intermediate L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 2.21e-01 0.222 0.18 0.944 B_Intermediate L2
ENSG00000127125 PPCS -801944 sc-eQTL 6.10e-01 0.0943 0.184 0.944 B_Intermediate L2
ENSG00000171793 CTPS1 674485 sc-eQTL 1.56e-01 0.253 0.177 0.944 B_Intermediate L2
ENSG00000179862 CITED4 791810 sc-eQTL 1.81e-01 -0.242 0.18 0.944 B_Intermediate L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 4.38e-01 -0.158 0.203 0.944 B_Intermediate L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 6.59e-02 -0.33 0.178 0.944 B_Intermediate L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 3.34e-02 0.411 0.192 0.944 B_Intermediate L2
ENSG00000010803 SCMH1 412019 sc-eQTL 1.56e-01 0.285 0.2 0.944 B_Memory L2
ENSG00000066136 NFYC 962525 sc-eQTL 4.99e-01 -0.131 0.194 0.944 B_Memory L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 6.12e-01 -0.101 0.198 0.944 B_Memory L2
ENSG00000127125 PPCS -801944 sc-eQTL 7.55e-01 0.0637 0.204 0.944 B_Memory L2
ENSG00000171793 CTPS1 674485 sc-eQTL 2.26e-01 0.228 0.188 0.944 B_Memory L2
ENSG00000179862 CITED4 791810 sc-eQTL 8.76e-01 0.0282 0.18 0.944 B_Memory L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 7.08e-01 -0.0682 0.182 0.944 B_Memory L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 5.36e-01 0.12 0.194 0.944 B_Memory L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 4.46e-01 0.149 0.196 0.944 B_Memory L2
ENSG00000010803 SCMH1 412019 sc-eQTL 5.22e-01 0.118 0.185 0.944 B_Naive1 L2
ENSG00000066136 NFYC 962525 sc-eQTL 9.97e-01 0.000765 0.175 0.944 B_Naive1 L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 2.58e-02 0.41 0.183 0.944 B_Naive1 L2
ENSG00000127125 PPCS -801944 sc-eQTL 6.89e-01 -0.0672 0.168 0.944 B_Naive1 L2
ENSG00000171793 CTPS1 674485 sc-eQTL 3.76e-02 0.311 0.149 0.944 B_Naive1 L2
ENSG00000179862 CITED4 791810 sc-eQTL 6.90e-01 -0.0595 0.149 0.944 B_Naive1 L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 3.08e-01 0.19 0.186 0.944 B_Naive1 L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 1.30e-01 0.238 0.157 0.944 B_Naive1 L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 3.92e-02 -0.394 0.19 0.944 B_Naive1 L2
ENSG00000010803 SCMH1 412019 sc-eQTL 4.67e-02 -0.396 0.198 0.944 B_Naive2 L2
ENSG00000066136 NFYC 962525 sc-eQTL 4.70e-01 0.144 0.198 0.944 B_Naive2 L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 7.45e-01 -0.0618 0.19 0.944 B_Naive2 L2
ENSG00000127125 PPCS -801944 sc-eQTL 6.39e-01 -0.0951 0.203 0.944 B_Naive2 L2
ENSG00000171793 CTPS1 674485 sc-eQTL 4.17e-01 0.149 0.183 0.944 B_Naive2 L2
ENSG00000179862 CITED4 791810 sc-eQTL 1.67e-01 -0.233 0.168 0.944 B_Naive2 L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 3.33e-01 0.188 0.194 0.944 B_Naive2 L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 2.37e-01 0.213 0.18 0.944 B_Naive2 L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 5.19e-01 0.127 0.196 0.944 B_Naive2 L2
ENSG00000010803 SCMH1 412019 sc-eQTL 5.55e-01 0.12 0.203 0.945 CD4_CTL L2
ENSG00000066136 NFYC 962525 sc-eQTL 6.15e-01 0.103 0.205 0.945 CD4_CTL L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 9.01e-01 0.0205 0.165 0.945 CD4_CTL L2
ENSG00000127125 PPCS -801944 sc-eQTL 8.20e-01 -0.0432 0.189 0.945 CD4_CTL L2
ENSG00000171793 CTPS1 674485 sc-eQTL 7.66e-01 -0.056 0.188 0.945 CD4_CTL L2
ENSG00000179862 CITED4 791810 sc-eQTL 5.93e-01 0.0863 0.161 0.945 CD4_CTL L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 6.95e-01 -0.0649 0.165 0.945 CD4_CTL L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 9.73e-01 -0.00675 0.2 0.945 CD4_CTL L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 8.21e-01 -0.0436 0.192 0.945 CD4_CTL L2
ENSG00000010803 SCMH1 412019 sc-eQTL 5.46e-01 -0.0991 0.164 0.944 CD4_Naive L2
ENSG00000066136 NFYC 962525 sc-eQTL 4.54e-01 0.138 0.183 0.944 CD4_Naive L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 2.86e-01 -0.212 0.199 0.944 CD4_Naive L2
ENSG00000127125 PPCS -801944 sc-eQTL 4.21e-01 -0.107 0.133 0.944 CD4_Naive L2
ENSG00000171793 CTPS1 674485 sc-eQTL 3.56e-01 0.0971 0.105 0.944 CD4_Naive L2
ENSG00000179862 CITED4 791810 sc-eQTL 7.96e-01 -0.0293 0.113 0.944 CD4_Naive L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 9.45e-01 0.0128 0.184 0.944 CD4_Naive L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 5.83e-01 0.0714 0.13 0.944 CD4_Naive L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 7.76e-01 0.0544 0.191 0.944 CD4_Naive L2
ENSG00000010803 SCMH1 412019 sc-eQTL 1.11e-01 -0.295 0.185 0.944 CD4_TCM L2
ENSG00000066136 NFYC 962525 sc-eQTL 5.41e-01 -0.112 0.183 0.944 CD4_TCM L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 2.55e-01 -0.203 0.178 0.944 CD4_TCM L2
ENSG00000127125 PPCS -801944 sc-eQTL 7.13e-01 0.0539 0.147 0.944 CD4_TCM L2
ENSG00000171793 CTPS1 674485 sc-eQTL 1.95e-01 0.168 0.129 0.944 CD4_TCM L2
ENSG00000179862 CITED4 791810 sc-eQTL 9.83e-01 -0.00237 0.11 0.944 CD4_TCM L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 8.76e-01 0.0317 0.203 0.944 CD4_TCM L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 7.13e-01 0.0527 0.143 0.944 CD4_TCM L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 8.59e-01 0.0348 0.195 0.944 CD4_TCM L2
ENSG00000010803 SCMH1 412019 sc-eQTL 3.89e-01 0.17 0.197 0.944 CD4_TEM L2
ENSG00000066136 NFYC 962525 sc-eQTL 7.43e-01 0.0702 0.214 0.944 CD4_TEM L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 4.83e-02 -0.413 0.208 0.944 CD4_TEM L2
ENSG00000127125 PPCS -801944 sc-eQTL 5.76e-01 0.103 0.184 0.944 CD4_TEM L2
ENSG00000171793 CTPS1 674485 sc-eQTL 4.26e-01 0.139 0.174 0.944 CD4_TEM L2
ENSG00000179862 CITED4 791810 sc-eQTL 6.91e-02 -0.27 0.148 0.944 CD4_TEM L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 1.87e-01 0.258 0.195 0.944 CD4_TEM L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 5.47e-01 0.105 0.175 0.944 CD4_TEM L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 1.55e-01 0.282 0.198 0.944 CD4_TEM L2
ENSG00000010803 SCMH1 412019 sc-eQTL 9.92e-01 -0.00188 0.186 0.944 CD8_CTL L2
ENSG00000066136 NFYC 962525 sc-eQTL 9.86e-01 0.00352 0.196 0.944 CD8_CTL L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 1.45e-01 -0.254 0.174 0.944 CD8_CTL L2
ENSG00000127125 PPCS -801944 sc-eQTL 5.67e-01 0.0889 0.155 0.944 CD8_CTL L2
ENSG00000171793 CTPS1 674485 sc-eQTL 7.88e-01 -0.0345 0.128 0.944 CD8_CTL L2
ENSG00000179862 CITED4 791810 sc-eQTL 1.11e-01 -0.256 0.16 0.944 CD8_CTL L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 8.90e-01 0.0277 0.199 0.944 CD8_CTL L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 4.08e-02 0.371 0.18 0.944 CD8_CTL L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 7.86e-01 -0.0532 0.195 0.944 CD8_CTL L2
ENSG00000010803 SCMH1 412019 sc-eQTL 3.95e-01 0.151 0.178 0.944 CD8_Naive L2
ENSG00000066136 NFYC 962525 sc-eQTL 4.89e-01 0.132 0.19 0.944 CD8_Naive L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 2.94e-01 0.192 0.183 0.944 CD8_Naive L2
ENSG00000127125 PPCS -801944 sc-eQTL 9.78e-01 -0.00504 0.185 0.944 CD8_Naive L2
ENSG00000171793 CTPS1 674485 sc-eQTL 3.00e-01 -0.157 0.151 0.944 CD8_Naive L2
ENSG00000179862 CITED4 791810 sc-eQTL 9.46e-01 0.00919 0.136 0.944 CD8_Naive L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 3.64e-01 -0.185 0.203 0.944 CD8_Naive L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 5.47e-01 0.0951 0.158 0.944 CD8_Naive L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 1.77e-01 -0.284 0.209 0.944 CD8_Naive L2
ENSG00000010803 SCMH1 412019 sc-eQTL 7.85e-01 0.06 0.22 0.949 CD8_TCM L2
ENSG00000066136 NFYC 962525 sc-eQTL 6.05e-01 -0.114 0.22 0.949 CD8_TCM L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 5.16e-01 -0.134 0.207 0.949 CD8_TCM L2
ENSG00000127125 PPCS -801944 sc-eQTL 3.52e-01 0.192 0.206 0.949 CD8_TCM L2
ENSG00000171793 CTPS1 674485 sc-eQTL 5.57e-02 0.363 0.189 0.949 CD8_TCM L2
ENSG00000179862 CITED4 791810 sc-eQTL 8.62e-01 -0.0283 0.162 0.949 CD8_TCM L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 5.53e-01 0.12 0.202 0.949 CD8_TCM L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 2.08e-01 -0.244 0.193 0.949 CD8_TCM L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 2.64e-01 -0.223 0.199 0.949 CD8_TCM L2
ENSG00000010803 SCMH1 412019 sc-eQTL 4.40e-01 0.155 0.201 0.941 CD8_TEM L2
ENSG00000066136 NFYC 962525 sc-eQTL 6.95e-01 -0.0803 0.205 0.941 CD8_TEM L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 6.93e-01 -0.0774 0.195 0.941 CD8_TEM L2
ENSG00000127125 PPCS -801944 sc-eQTL 1.02e-01 -0.312 0.19 0.941 CD8_TEM L2
ENSG00000171793 CTPS1 674485 sc-eQTL 1.53e-01 -0.259 0.181 0.941 CD8_TEM L2
ENSG00000179862 CITED4 791810 sc-eQTL 9.97e-01 0.000807 0.185 0.941 CD8_TEM L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 6.29e-01 0.0827 0.171 0.941 CD8_TEM L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 7.12e-01 0.0705 0.191 0.941 CD8_TEM L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 5.47e-01 -0.116 0.192 0.941 CD8_TEM L2
ENSG00000010803 SCMH1 412019 sc-eQTL 7.64e-01 -0.0553 0.184 0.944 MAIT L2
ENSG00000066136 NFYC 962525 sc-eQTL 3.89e-01 -0.177 0.206 0.944 MAIT L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 1.89e-01 -0.253 0.192 0.944 MAIT L2
ENSG00000127125 PPCS -801944 sc-eQTL 1.38e-01 -0.266 0.179 0.944 MAIT L2
ENSG00000171793 CTPS1 674485 sc-eQTL 9.95e-01 0.0011 0.178 0.944 MAIT L2
ENSG00000179862 CITED4 791810 sc-eQTL 6.51e-02 -0.297 0.16 0.944 MAIT L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 1.01e-01 0.304 0.184 0.944 MAIT L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 7.22e-01 0.0716 0.201 0.944 MAIT L2
ENSG00000010803 SCMH1 412019 sc-eQTL 6.18e-02 0.372 0.198 0.947 NK_CD56bright L2
ENSG00000066136 NFYC 962525 sc-eQTL 7.10e-01 0.0812 0.218 0.947 NK_CD56bright L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 7.52e-01 -0.0632 0.2 0.947 NK_CD56bright L2
ENSG00000127125 PPCS -801944 sc-eQTL 2.15e-02 0.476 0.205 0.947 NK_CD56bright L2
ENSG00000171793 CTPS1 674485 sc-eQTL 8.89e-01 0.0254 0.182 0.947 NK_CD56bright L2
ENSG00000179862 CITED4 791810 sc-eQTL 4.15e-01 -0.155 0.19 0.947 NK_CD56bright L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 2.72e-01 -0.207 0.188 0.947 NK_CD56bright L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 1.25e-01 -0.292 0.19 0.947 NK_CD56bright L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 4.48e-01 0.152 0.2 0.947 NK_CD56bright L2
ENSG00000010803 SCMH1 412019 sc-eQTL 2.30e-01 -0.222 0.184 0.944 NK_CD56dim L2
ENSG00000066136 NFYC 962525 sc-eQTL 6.12e-01 -0.0889 0.175 0.944 NK_CD56dim L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 1.32e-01 -0.272 0.18 0.944 NK_CD56dim L2
ENSG00000127125 PPCS -801944 sc-eQTL 5.28e-01 0.114 0.181 0.944 NK_CD56dim L2
ENSG00000171793 CTPS1 674485 sc-eQTL 6.19e-02 -0.243 0.13 0.944 NK_CD56dim L2
ENSG00000179862 CITED4 791810 sc-eQTL 7.05e-01 0.0622 0.164 0.944 NK_CD56dim L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 3.91e-01 -0.167 0.194 0.944 NK_CD56dim L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 3.07e-01 0.151 0.148 0.944 NK_CD56dim L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 2.53e-01 0.248 0.216 0.944 NK_CD56dim L2
ENSG00000010803 SCMH1 412019 sc-eQTL 6.46e-01 -0.0914 0.199 0.945 NK_HLA L2
ENSG00000066136 NFYC 962525 sc-eQTL 4.31e-01 0.166 0.21 0.945 NK_HLA L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 9.76e-01 0.00614 0.205 0.945 NK_HLA L2
ENSG00000127125 PPCS -801944 sc-eQTL 3.36e-01 0.19 0.197 0.945 NK_HLA L2
ENSG00000171793 CTPS1 674485 sc-eQTL 7.19e-01 -0.0656 0.182 0.945 NK_HLA L2
ENSG00000179862 CITED4 791810 sc-eQTL 4.26e-01 -0.149 0.187 0.945 NK_HLA L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 2.66e-01 -0.201 0.181 0.945 NK_HLA L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 2.65e-01 0.218 0.195 0.945 NK_HLA L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 9.06e-01 -0.0239 0.203 0.945 NK_HLA L2
ENSG00000010803 SCMH1 412019 sc-eQTL 1.82e-01 0.261 0.195 0.944 NK_cytokine L2
ENSG00000066136 NFYC 962525 sc-eQTL 5.56e-01 0.114 0.194 0.944 NK_cytokine L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 2.38e-01 -0.235 0.199 0.944 NK_cytokine L2
ENSG00000127125 PPCS -801944 sc-eQTL 6.53e-01 -0.079 0.175 0.944 NK_cytokine L2
ENSG00000171793 CTPS1 674485 sc-eQTL 5.85e-01 -0.0822 0.15 0.944 NK_cytokine L2
ENSG00000179862 CITED4 791810 sc-eQTL 6.68e-01 -0.0749 0.174 0.944 NK_cytokine L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 1.42e-01 -0.298 0.202 0.944 NK_cytokine L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 9.02e-01 -0.0216 0.175 0.944 NK_cytokine L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 3.88e-01 -0.169 0.195 0.944 NK_cytokine L2
ENSG00000010803 SCMH1 412019 sc-eQTL 4.32e-01 0.235 0.298 0.948 PB L2
ENSG00000066136 NFYC 962525 sc-eQTL 5.35e-01 -0.159 0.256 0.948 PB L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 5.17e-01 -0.171 0.263 0.948 PB L2
ENSG00000127125 PPCS -801944 sc-eQTL 5.42e-01 -0.162 0.265 0.948 PB L2
ENSG00000171793 CTPS1 674485 sc-eQTL 3.08e-02 -0.557 0.255 0.948 PB L2
ENSG00000179862 CITED4 791810 sc-eQTL 3.01e-01 0.238 0.229 0.948 PB L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 2.40e-01 -0.258 0.218 0.948 PB L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 8.98e-01 0.0372 0.29 0.948 PB L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 7.39e-01 -0.0807 0.241 0.948 PB L2
ENSG00000010803 SCMH1 412019 sc-eQTL 2.81e-01 -0.21 0.194 0.946 Pro_T L2
ENSG00000066136 NFYC 962525 sc-eQTL 3.69e-01 0.167 0.186 0.946 Pro_T L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 9.83e-02 -0.274 0.165 0.946 Pro_T L2
ENSG00000127125 PPCS -801944 sc-eQTL 2.29e-01 0.25 0.207 0.946 Pro_T L2
ENSG00000171793 CTPS1 674485 sc-eQTL 7.31e-02 -0.326 0.181 0.946 Pro_T L2
ENSG00000179862 CITED4 791810 sc-eQTL 5.15e-01 -0.112 0.171 0.946 Pro_T L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 4.39e-01 -0.153 0.198 0.946 Pro_T L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 5.22e-01 -0.122 0.19 0.946 Pro_T L2
ENSG00000010803 SCMH1 412019 sc-eQTL 8.28e-01 0.0416 0.191 0.944 Treg L2
ENSG00000066136 NFYC 962525 sc-eQTL 9.85e-01 -0.00367 0.202 0.944 Treg L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 1.43e-01 0.283 0.192 0.944 Treg L2
ENSG00000127125 PPCS -801944 sc-eQTL 3.38e-01 -0.194 0.202 0.944 Treg L2
ENSG00000171793 CTPS1 674485 sc-eQTL 5.87e-01 0.104 0.192 0.944 Treg L2
ENSG00000179862 CITED4 791810 sc-eQTL 5.01e-01 -0.0821 0.122 0.944 Treg L2
ENSG00000186409 CCDC30 -809048 sc-eQTL 6.95e-01 0.0699 0.178 0.944 Treg L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 1.33e-01 -0.255 0.169 0.944 Treg L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 3.82e-01 -0.18 0.205 0.944 Treg L2
ENSG00000010803 SCMH1 412019 sc-eQTL 7.57e-01 0.0575 0.186 0.944 cMono_IL1B L2
ENSG00000066136 NFYC 962525 sc-eQTL 9.61e-01 0.00842 0.174 0.944 cMono_IL1B L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 8.58e-01 -0.0221 0.124 0.944 cMono_IL1B L2
ENSG00000127125 PPCS -801944 sc-eQTL 2.27e-01 0.159 0.131 0.944 cMono_IL1B L2
ENSG00000171793 CTPS1 674485 sc-eQTL 5.41e-01 0.122 0.199 0.944 cMono_IL1B L2
ENSG00000179862 CITED4 791810 sc-eQTL 7.49e-01 0.0461 0.144 0.944 cMono_IL1B L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 9.04e-01 -0.0218 0.181 0.944 cMono_IL1B L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 7.85e-01 -0.0554 0.203 0.944 cMono_IL1B L2
ENSG00000010803 SCMH1 412019 sc-eQTL 7.20e-02 -0.345 0.191 0.944 cMono_S100A L2
ENSG00000066136 NFYC 962525 sc-eQTL 5.65e-01 0.106 0.184 0.944 cMono_S100A L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 1.36e-03 0.431 0.133 0.944 cMono_S100A L2
ENSG00000127125 PPCS -801944 sc-eQTL 7.13e-01 -0.0631 0.171 0.944 cMono_S100A L2
ENSG00000171793 CTPS1 674485 sc-eQTL 9.58e-01 -0.0105 0.198 0.944 cMono_S100A L2
ENSG00000179862 CITED4 791810 sc-eQTL 2.93e-01 0.151 0.143 0.944 cMono_S100A L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 1.12e-01 0.299 0.187 0.944 cMono_S100A L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 5.16e-01 -0.126 0.193 0.944 cMono_S100A L2
ENSG00000010803 SCMH1 412019 sc-eQTL 5.80e-01 0.131 0.236 0.945 gdT L2
ENSG00000066136 NFYC 962525 sc-eQTL 9.33e-01 0.022 0.261 0.945 gdT L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 3.33e-02 -0.491 0.228 0.945 gdT L2
ENSG00000127125 PPCS -801944 sc-eQTL 7.93e-01 -0.064 0.243 0.945 gdT L2
ENSG00000171793 CTPS1 674485 sc-eQTL 6.11e-01 -0.113 0.222 0.945 gdT L2
ENSG00000179862 CITED4 791810 sc-eQTL 9.49e-01 -0.0146 0.227 0.945 gdT L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 6.29e-01 0.111 0.229 0.945 gdT L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 5.69e-01 0.133 0.234 0.945 gdT L2
ENSG00000010803 SCMH1 412019 sc-eQTL 6.51e-01 -0.0946 0.209 0.944 intMono L2
ENSG00000066136 NFYC 962525 sc-eQTL 5.07e-01 -0.145 0.218 0.944 intMono L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 7.62e-01 0.0505 0.166 0.944 intMono L2
ENSG00000127125 PPCS -801944 sc-eQTL 4.10e-01 0.156 0.189 0.944 intMono L2
ENSG00000171793 CTPS1 674485 sc-eQTL 7.93e-01 -0.0564 0.215 0.944 intMono L2
ENSG00000179862 CITED4 791810 sc-eQTL 4.84e-02 0.349 0.176 0.944 intMono L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 8.31e-01 0.0466 0.218 0.944 intMono L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 5.98e-01 0.109 0.206 0.944 intMono L2
ENSG00000010803 SCMH1 412019 sc-eQTL 8.81e-01 0.028 0.186 0.941 ncMono L2
ENSG00000066136 NFYC 962525 sc-eQTL 5.33e-01 -0.122 0.196 0.941 ncMono L2
ENSG00000127124 HIVEP3 -381752 sc-eQTL 4.38e-02 -0.344 0.169 0.941 ncMono L2
ENSG00000127125 PPCS -801944 sc-eQTL 6.75e-01 0.0778 0.185 0.941 ncMono L2
ENSG00000171793 CTPS1 674485 sc-eQTL 4.47e-01 -0.161 0.212 0.941 ncMono L2
ENSG00000179862 CITED4 791810 sc-eQTL 6.99e-01 0.0578 0.149 0.941 ncMono L2
ENSG00000198815 FOXJ3 -681704 sc-eQTL 5.59e-01 -0.108 0.184 0.941 ncMono L2
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 2.04e-01 0.24 0.189 0.941 ncMono L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000010803 SCMH1 412019 sc-eQTL 7.39e-01 0.0641 0.192 0.944 B_Memory LOneK1K
ENSG00000066136 NFYC 962525 sc-eQTL 4.13e-01 -0.148 0.181 0.944 B_Memory LOneK1K
ENSG00000127124 HIVEP3 -381752 sc-eQTL 4.91e-01 0.122 0.177 0.944 B_Memory LOneK1K
ENSG00000127125 PPCS -801944 sc-eQTL 8.44e-01 0.0349 0.176 0.944 B_Memory LOneK1K
ENSG00000171793 CTPS1 674485 sc-eQTL 1.76e-02 0.401 0.168 0.944 B_Memory LOneK1K
ENSG00000179862 CITED4 791810 sc-eQTL 1.04e-01 -0.291 0.178 0.944 B_Memory LOneK1K
ENSG00000186409 CCDC30 -809048 sc-eQTL 2.75e-01 -0.223 0.204 0.944 B_Memory LOneK1K
ENSG00000198815 FOXJ3 -681704 sc-eQTL 3.68e-01 -0.143 0.158 0.944 B_Memory LOneK1K
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 1.45e-03 0.626 0.194 0.944 B_Memory LOneK1K
ENSG00000010803 SCMH1 412019 sc-eQTL 5.28e-01 -0.11 0.174 0.944 B_Naive LOneK1K
ENSG00000066136 NFYC 962525 sc-eQTL 4.68e-01 0.121 0.167 0.944 B_Naive LOneK1K
ENSG00000127124 HIVEP3 -381752 sc-eQTL 1.40e-01 0.269 0.181 0.944 B_Naive LOneK1K
ENSG00000127125 PPCS -801944 sc-eQTL 4.98e-01 -0.113 0.167 0.944 B_Naive LOneK1K
ENSG00000171793 CTPS1 674485 sc-eQTL 1.20e-01 0.219 0.14 0.944 B_Naive LOneK1K
ENSG00000179862 CITED4 791810 sc-eQTL 6.77e-01 -0.0604 0.145 0.944 B_Naive LOneK1K
ENSG00000186409 CCDC30 -809048 sc-eQTL 1.32e-01 0.282 0.187 0.944 B_Naive LOneK1K
ENSG00000198815 FOXJ3 -681704 sc-eQTL 8.59e-02 0.264 0.153 0.944 B_Naive LOneK1K
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 3.10e-01 -0.185 0.182 0.944 B_Naive LOneK1K
ENSG00000010803 SCMH1 412019 sc-eQTL 4.93e-01 -0.117 0.17 0.944 CD14_Mono LOneK1K
ENSG00000066136 NFYC 962525 sc-eQTL 8.51e-01 0.0307 0.163 0.944 CD14_Mono LOneK1K
ENSG00000127124 HIVEP3 -381752 sc-eQTL 1.72e-01 0.153 0.112 0.944 CD14_Mono LOneK1K
ENSG00000127125 PPCS -801944 sc-eQTL 5.06e-01 0.0827 0.124 0.944 CD14_Mono LOneK1K
ENSG00000171793 CTPS1 674485 sc-eQTL 6.73e-01 0.0797 0.188 0.944 CD14_Mono LOneK1K
ENSG00000179862 CITED4 791810 sc-eQTL 5.21e-01 0.0876 0.136 0.944 CD14_Mono LOneK1K
ENSG00000198815 FOXJ3 -681704 sc-eQTL 3.12e-01 0.167 0.165 0.944 CD14_Mono LOneK1K
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 3.51e-01 -0.181 0.194 0.944 CD14_Mono LOneK1K
ENSG00000010803 SCMH1 412019 sc-eQTL 6.76e-01 -0.0822 0.197 0.944 CD16_Mono LOneK1K
ENSG00000066136 NFYC 962525 sc-eQTL 7.46e-01 -0.0633 0.195 0.944 CD16_Mono LOneK1K
ENSG00000127124 HIVEP3 -381752 sc-eQTL 6.94e-01 -0.0617 0.156 0.944 CD16_Mono LOneK1K
ENSG00000127125 PPCS -801944 sc-eQTL 7.27e-01 0.0622 0.178 0.944 CD16_Mono LOneK1K
ENSG00000171793 CTPS1 674485 sc-eQTL 5.77e-01 -0.119 0.213 0.944 CD16_Mono LOneK1K
ENSG00000179862 CITED4 791810 sc-eQTL 2.31e-01 0.161 0.134 0.944 CD16_Mono LOneK1K
ENSG00000198815 FOXJ3 -681704 sc-eQTL 8.53e-01 -0.0348 0.187 0.944 CD16_Mono LOneK1K
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 6.54e-01 0.0907 0.202 0.944 CD16_Mono LOneK1K
ENSG00000010803 SCMH1 412019 sc-eQTL 5.04e-01 -0.121 0.18 0.944 NK_CD56dim LOneK1K
ENSG00000066136 NFYC 962525 sc-eQTL 7.53e-01 -0.0527 0.167 0.944 NK_CD56dim LOneK1K
ENSG00000127124 HIVEP3 -381752 sc-eQTL 1.41e-01 -0.253 0.171 0.944 NK_CD56dim LOneK1K
ENSG00000127125 PPCS -801944 sc-eQTL 5.51e-01 0.0929 0.155 0.944 NK_CD56dim LOneK1K
ENSG00000171793 CTPS1 674485 sc-eQTL 2.65e-01 -0.143 0.128 0.944 NK_CD56dim LOneK1K
ENSG00000179862 CITED4 791810 sc-eQTL 8.56e-01 0.029 0.16 0.944 NK_CD56dim LOneK1K
ENSG00000186409 CCDC30 -809048 sc-eQTL 4.75e-02 -0.38 0.19 0.944 NK_CD56dim LOneK1K
ENSG00000198815 FOXJ3 -681704 sc-eQTL 1.78e-01 0.176 0.13 0.944 NK_CD56dim LOneK1K
ENSG00000272145 NFYC-AS1 962107 sc-eQTL 7.51e-01 -0.0695 0.219 0.944 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000198815 FOXJ3 -681704 pQTL 0.0453 -0.0679 0.0339 0.00171 0.0 0.0546
ENSG00000281207 SLFNL1-AS1 639583 eQTL 0.00248 -0.161 0.053 0.0 0.0 0.0564

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000281207 SLFNL1-AS1 639583 8.35e-07 1.56e-07 7.16e-08 2.25e-07 8.83e-08 1.13e-07 2.4e-07 5.2e-08 1.45e-07 5.67e-08 1.54e-07 8.68e-08 1.87e-07 8e-08 1.68e-07 8.08e-08 3.94e-08 1.77e-07 7.42e-08 4.78e-08 1.26e-07 1.42e-07 1.68e-07 2.93e-08 1.68e-07 1.16e-07 1.25e-07 9.74e-08 1.31e-07 1e-07 1.08e-07 3.98e-08 3.43e-08 1.02e-07 4.04e-08 3.53e-08 5.37e-08 9.56e-08 6.54e-08 4.55e-08 3.59e-08 1.59e-07 3.35e-08 2.03e-08 3.42e-08 1.71e-08 1.18e-07 1.88e-09 4.94e-08