Genes within 1Mb (chr1:40689419:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066136 NFYC -2270 eQTL 1.48e-05 0.0746 0.0171 0.0 0.0 0.0697
ENSG00000131238 PPT1 591692 eQTL 4.68e-03 -0.156 0.0551 0.0 0.0 0.0697
ENSG00000164002 EXO5 180678 eQTL 2.78e-05 -0.171 0.0405 0.0 0.0 0.0697
ENSG00000171790 SLFNL1 -333818 eQTL 1.46e-02 -0.129 0.0527 0.0 0.0 0.0697
ENSG00000187801 ZFP69B 239312 eQTL 7.65e-03 -0.137 0.0514 0.0 0.0 0.0697
ENSG00000187815 ZFP69 212129 eQTL 7.86e-03 -0.106 0.0398 0.0 0.0 0.0697
ENSG00000213172 AL031985.1 324653 eQTL 2.54e-02 -0.117 0.0522 0.0 0.0 0.0697
ENSG00000228477 AL663070.1 726739 eQTL 8.64e-03 -0.128 0.0488 0.00267 0.0 0.0697
ENSG00000238287 AL603839.3 180758 eQTL 1.44e-02 0.197 0.0805 0.0 0.0 0.0697
ENSG00000260920 AL031985.3 225100 eQTL 1.54e-03 -0.148 0.0465 0.0 0.0 0.0697


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000049089 \N 372133 1.24e-06 1.01e-06 2.79e-07 9.43e-07 2.95e-07 5.63e-07 1.32e-06 3.37e-07 1.28e-06 4.24e-07 1.49e-06 6.03e-07 2e-06 2.76e-07 5.58e-07 7.54e-07 8.37e-07 5.47e-07 6.91e-07 6.55e-07 4.86e-07 1.24e-06 8.26e-07 6.1e-07 1.95e-06 3.75e-07 7.27e-07 7.68e-07 1.17e-06 1.18e-06 6.16e-07 2.52e-07 2.33e-07 5.39e-07 4.34e-07 4.32e-07 5.17e-07 2.03e-07 3.18e-07 2.48e-07 2.39e-07 1.54e-06 6.17e-08 1.3e-07 1.72e-07 1.26e-07 2.26e-07 3.66e-08 1.34e-07
ENSG00000066136 NFYC -2270 5.24e-05 4.46e-05 1.15e-05 2.31e-05 1.03e-05 2.38e-05 6.82e-05 8.83e-06 5.63e-05 3.03e-05 7.69e-05 2.98e-05 8.11e-05 2.39e-05 1.3e-05 3.74e-05 3.11e-05 4.39e-05 1.4e-05 1.45e-05 3.11e-05 6.11e-05 4.96e-05 1.87e-05 7.5e-05 1.78e-05 2.5e-05 2.41e-05 5.14e-05 5.18e-05 3.8e-05 5.3e-06 7.71e-06 1.26e-05 2.11e-05 1.08e-05 7.1e-06 7.52e-06 9.99e-06 5.87e-06 3.2e-06 5.11e-05 5.91e-06 1.19e-06 6.1e-06 8.83e-06 8.03e-06 4.31e-06 3.75e-06
ENSG00000131236 \N 649186 3.92e-07 3.11e-07 7.16e-08 2.92e-07 1.07e-07 1.54e-07 3.42e-07 7.65e-08 2.26e-07 1.39e-07 2.98e-07 1.86e-07 3.77e-07 8.85e-08 1.01e-07 1.14e-07 1.01e-07 2.75e-07 9.69e-08 8.25e-08 1.48e-07 2.24e-07 2.04e-07 5.11e-08 3.55e-07 1.94e-07 1.39e-07 1.68e-07 1.58e-07 1.89e-07 1.76e-07 5.99e-08 5.2e-08 9.61e-08 1.16e-07 5.14e-08 8.87e-08 6.2e-08 4.78e-08 7.39e-08 4.73e-08 2.41e-07 3.37e-08 1.05e-08 7.93e-08 8.76e-09 1.04e-07 3.09e-09 5.52e-08
ENSG00000131238 PPT1 591692 5.74e-07 4.93e-07 8.55e-08 3.43e-07 1.07e-07 1.74e-07 4.14e-07 9.78e-08 2.75e-07 1.78e-07 4.3e-07 2.49e-07 5.39e-07 1.01e-07 1.48e-07 1.53e-07 2.07e-07 3.04e-07 1.55e-07 1.3e-07 1.76e-07 2.7e-07 2.63e-07 1.06e-07 4.88e-07 2.32e-07 1.83e-07 1.95e-07 2.31e-07 2.75e-07 2e-07 6.31e-08 6.08e-08 1.21e-07 1.97e-07 6.18e-08 1.18e-07 7.98e-08 4.9e-08 5.32e-08 2.81e-08 3.06e-07 1.65e-08 5.8e-09 9.79e-08 1.75e-08 7.36e-08 1.18e-08 5.43e-08
ENSG00000179862 \N -172947 4.62e-06 5e-06 7.64e-07 2.73e-06 1.27e-06 1.7e-06 4.13e-06 9.97e-07 4.93e-06 2.43e-06 5.26e-06 3.46e-06 7.26e-06 2.13e-06 1.35e-06 2.92e-06 2.05e-06 2.79e-06 1.44e-06 1.02e-06 2.77e-06 4.74e-06 3.51e-06 1.63e-06 5.31e-06 1.46e-06 2.66e-06 1.72e-06 4.32e-06 3.77e-06 2.81e-06 5.26e-07 7.92e-07 1.82e-06 2.01e-06 8.53e-07 9.59e-07 4.24e-07 1.27e-06 3.79e-07 2.08e-07 5.27e-06 3.83e-07 1.66e-07 3.43e-07 6.92e-07 8.4e-07 4.11e-07 3.26e-07
ENSG00000213172 AL031985.1 324653 1.3e-06 1.36e-06 2.74e-07 1.33e-06 3.91e-07 6.06e-07 1.5e-06 4.04e-07 1.59e-06 5.86e-07 2.04e-06 8.32e-07 2.45e-06 2.95e-07 4.96e-07 9.54e-07 9.36e-07 8e-07 7.81e-07 4.38e-07 8.18e-07 1.82e-06 8.89e-07 5.64e-07 2.23e-06 6.73e-07 9.45e-07 9.6e-07 1.47e-06 1.21e-06 8.17e-07 2.54e-07 2.57e-07 6.9e-07 5.32e-07 4.42e-07 6.97e-07 3.27e-07 4.82e-07 3.15e-07 2.57e-07 1.63e-06 2.33e-07 1.74e-07 3.22e-07 2.11e-07 2.43e-07 1.39e-07 2.03e-07
ENSG00000260920 AL031985.3 225100 3.16e-06 3.5e-06 3.38e-07 2e-06 6.17e-07 7.41e-07 2.29e-06 8.7e-07 2.27e-06 1.24e-06 2.9e-06 1.44e-06 3.92e-06 1.36e-06 8.93e-07 1.62e-06 1.61e-06 2.2e-06 1.38e-06 1.28e-06 1.37e-06 3.2e-06 2.44e-06 1.01e-06 4.02e-06 1.13e-06 1.52e-06 1.8e-06 2.39e-06 1.99e-06 1.99e-06 3.98e-07 5.43e-07 1.2e-06 1.35e-06 9.48e-07 7.5e-07 4.24e-07 1.11e-06 3.79e-07 2.89e-07 3.43e-06 5.97e-07 1.68e-07 2.73e-07 4.02e-07 8.19e-07 2.15e-07 1.57e-07