Genes within 1Mb (chr1:40435847:T:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000010803 SCMH1 -806269 eQTL 1.33e-02 0.0709 0.0286 0.0 0.0 0.0608
ENSG00000043514 TRIT1 552336 eQTL 4.53e-02 -0.0795 0.0397 0.0 0.0 0.0608
ENSG00000066136 NFYC -255842 eQTL 3.73e-02 -0.0389 0.0186 0.00202 0.0 0.0608
ENSG00000164002 EXO5 -72894 eQTL 1.60e-01 0.062 0.0441 0.00104 0.0 0.0608
ENSG00000183682 BMP8A 944211 eQTL 5.41e-04 0.185 0.0533 0.0 0.0 0.0608
ENSG00000238287 AL603839.3 -72814 eQTL 1.09e-09 -0.526 0.0854 0.0 0.0 0.0608
ENSG00000243970 PPIEL 876176 eQTL 1.42e-02 0.132 0.0536 0.0 0.0 0.0608
ENSG00000259943 AL050341.2 177880 eQTL 3.01e-02 0.0881 0.0405 0.0 0.0 0.0608
ENSG00000281207 SLFNL1-AS1 -578743 eQTL 2.34e-02 0.117 0.0513 0.0 0.0 0.0608


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000010803 SCMH1 -806269 2.69e-07 1.19e-07 3.56e-08 1.81e-07 8.92e-08 9.65e-08 1.49e-07 5.33e-08 1.44e-07 4.4e-08 1.62e-07 7.78e-08 1.41e-07 6.56e-08 6.02e-08 7.26e-08 4.48e-08 1.18e-07 5.21e-08 4.04e-08 1.13e-07 1.23e-07 1.39e-07 4.13e-08 1.37e-07 1.15e-07 1.11e-07 9.61e-08 1.05e-07 1.12e-07 9.64e-08 3.72e-08 3.89e-08 8.68e-08 8.38e-08 3.77e-08 5.08e-08 9.26e-08 7.2e-08 3e-08 4.36e-08 1.4e-07 5.21e-08 1.29e-08 5.7e-08 1.84e-08 1.23e-07 3.8e-09 4.85e-08
ENSG00000066136 NFYC -255842 1.41e-06 1.36e-06 2.43e-07 1.26e-06 3.46e-07 6.43e-07 1.25e-06 3.31e-07 1.51e-06 5.11e-07 2.04e-06 7.79e-07 2.64e-06 4.66e-07 3.61e-07 9.54e-07 8.9e-07 7.78e-07 8.04e-07 4.51e-07 6.18e-07 1.95e-06 1.35e-06 6.42e-07 2.35e-06 3.28e-07 9.3e-07 8.31e-07 1.62e-06 1.23e-06 8.46e-07 3.02e-07 3.24e-07 6.53e-07 5.2e-07 4.36e-07 7.3e-07 2.97e-07 4.8e-07 2.44e-07 2.84e-07 2.75e-06 4.96e-07 5.54e-09 1.54e-07 2.74e-07 2.21e-07 3.68e-08 8.28e-08
ENSG00000117000 \N 274460 1.3e-06 1.03e-06 3.3e-07 1.23e-06 2.71e-07 6.22e-07 1.49e-06 2.88e-07 1.49e-06 4.24e-07 1.84e-06 6.31e-07 2.47e-06 3.24e-07 4.92e-07 8.22e-07 7.88e-07 6.45e-07 8.26e-07 6.16e-07 7.67e-07 1.69e-06 1.11e-06 5.4e-07 2.31e-06 2.54e-07 8.75e-07 9.09e-07 1.38e-06 1.25e-06 8.06e-07 2.78e-07 2.69e-07 4.91e-07 5.46e-07 4.59e-07 5.58e-07 2.39e-07 3.79e-07 7.66e-08 1.99e-07 2.5e-06 3.74e-07 1.05e-08 1.86e-07 2.17e-07 1.88e-07 8.37e-08 7.91e-08
ENSG00000183682 BMP8A 944211 2.61e-07 1.1e-07 3.69e-08 1.82e-07 9.65e-08 9.57e-08 1.38e-07 5.35e-08 1.41e-07 4.38e-08 1.59e-07 8.03e-08 1.3e-07 6.21e-08 5.53e-08 7.89e-08 4.94e-08 1.1e-07 5.2e-08 4.2e-08 1.04e-07 1.28e-07 1.26e-07 4.53e-08 1.31e-07 1.13e-07 1.12e-07 9.32e-08 1.02e-07 1.11e-07 9.58e-08 3.26e-08 3.3e-08 8.82e-08 8.93e-08 3.9e-08 5.06e-08 9.65e-08 7.92e-08 3.07e-08 4.46e-08 1.33e-07 4.52e-08 2.1e-08 6.92e-08 1.66e-08 1.25e-07 3.95e-09 5.04e-08
ENSG00000187801 \N -14260 2.66e-05 2.87e-05 4.26e-06 1.3e-05 3.32e-06 9.07e-06 3.25e-05 3.67e-06 2.15e-05 1.13e-05 3.11e-05 9.87e-06 3.92e-05 1.08e-05 5.84e-06 1.34e-05 1.11e-05 1.78e-05 6.14e-06 4.92e-06 1.04e-05 2.42e-05 2.41e-05 6.06e-06 3.39e-05 5.95e-06 9.71e-06 9.24e-06 2.52e-05 1.93e-05 1.63e-05 1.33e-06 1.93e-06 5.09e-06 8.6e-06 4.22e-06 2.04e-06 2.76e-06 3.52e-06 2.77e-06 1.14e-06 3.42e-05 2.71e-06 2.03e-07 1.93e-06 2.87e-06 3.11e-06 1.34e-06 1.27e-06
ENSG00000243970 PPIEL 876176 2.67e-07 1.11e-07 3.62e-08 1.84e-07 9.02e-08 9.71e-08 1.42e-07 5.49e-08 1.4e-07 4.38e-08 1.62e-07 7.75e-08 1.41e-07 6.38e-08 6e-08 7.5e-08 4.63e-08 1.14e-07 5.19e-08 4.07e-08 1.04e-07 1.27e-07 1.32e-07 4.54e-08 1.33e-07 1.15e-07 1.12e-07 9.36e-08 1.03e-07 1.1e-07 9.91e-08 3.03e-08 3.35e-08 8.65e-08 8.96e-08 3.99e-08 5.01e-08 9.22e-08 7.52e-08 3.03e-08 3.92e-08 1.33e-07 5.24e-08 1.66e-08 5.87e-08 1.99e-08 1.24e-07 3.89e-09 4.73e-08
ENSG00000284719 \N 636425 3.02e-07 1.33e-07 5.14e-08 2.27e-07 9.24e-08 8.33e-08 1.99e-07 5.37e-08 1.5e-07 5.67e-08 1.62e-07 1.01e-07 2.05e-07 8.13e-08 5.36e-08 7.5e-08 4.17e-08 1.44e-07 6.07e-08 5.33e-08 1.18e-07 1.31e-07 1.62e-07 3.03e-08 1.72e-07 1.14e-07 1.13e-07 1.12e-07 1.22e-07 1.05e-07 1.09e-07 7.91e-08 3.65e-08 8.89e-08 3.4e-08 3.28e-08 4.62e-08 8.2e-08 6.71e-08 3.76e-08 5.8e-08 1.62e-07 3.53e-08 1.17e-08 3.41e-08 6.53e-09 1.22e-07 1.98e-09 4.99e-08