|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|
|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|---|---|---|---|---|---|---|---|---|
| ENSG00000043514 | TRIT1 | 270388 | sc-eQTL | 5.38e-01 | -0.117 | 0.19 | 0.05 | CD4_CTL | L2 |
| ENSG00000049089 | COL9A2 | -163914 | sc-eQTL | 6.73e-01 | -0.0615 | 0.146 | 0.05 | CD4_CTL | L2 |
| ENSG00000066136 | NFYC | -537749 | sc-eQTL | 6.83e-01 | 0.0821 | 0.201 | 0.05 | CD4_CTL | L2 |
| ENSG00000084070 | SMAP2 | -190951 | sc-eQTL | 3.79e-01 | -0.114 | 0.13 | 0.05 | CD4_CTL | L2 |
| ENSG00000084072 | PPIE | 461717 | sc-eQTL | 6.79e-01 | -0.0823 | 0.199 | 0.05 | CD4_CTL | L2 |
| ENSG00000084073 | ZMPSTE24 | -104337 | sc-eQTL | 8.09e-01 | -0.0482 | 0.199 | 0.05 | CD4_CTL | L2 |
| ENSG00000090621 | PABPC4 | 577109 | sc-eQTL | 3.13e-01 | -0.186 | 0.184 | 0.05 | CD4_CTL | L2 |
| ENSG00000116983 | HPCAL4 | 462414 | sc-eQTL | 5.76e-01 | -0.0969 | 0.173 | 0.05 | CD4_CTL | L2 |
| ENSG00000117000 | RLF | -7488 | sc-eQTL | 7.57e-01 | -0.059 | 0.191 | 0.05 | CD4_CTL | L2 |
| ENSG00000117010 | ZNF684 | -377674 | sc-eQTL | 8.18e-01 | 0.0414 | 0.18 | 0.05 | CD4_CTL | L2 |
| ENSG00000131236 | CAP1 | 113666 | sc-eQTL | 6.39e-03 | 0.349 | 0.126 | 0.05 | CD4_CTL | L2 |
| ENSG00000131238 | PPT1 | 56172 | sc-eQTL | 3.38e-01 | 0.192 | 0.2 | 0.05 | CD4_CTL | L2 |
| ENSG00000164002 | EXO5 | -354842 | sc-eQTL | 5.48e-01 | 0.113 | 0.188 | 0.05 | CD4_CTL | L2 |
| ENSG00000171793 | CTPS1 | -825789 | sc-eQTL | 7.24e-01 | -0.0651 | 0.184 | 0.05 | CD4_CTL | L2 |
| ENSG00000179862 | CITED4 | -708464 | sc-eQTL | 8.46e-01 | 0.0306 | 0.158 | 0.05 | CD4_CTL | L2 |
| ENSG00000187801 | ZFP69B | -296203 | sc-eQTL | 6.54e-01 | -0.0765 | 0.17 | 0.05 | CD4_CTL | L2 |
| ENSG00000187815 | ZFP69 | -323391 | sc-eQTL | 5.34e-01 | 0.115 | 0.185 | 0.05 | CD4_CTL | L2 |
| ENSG00000259943 | AL050341.2 | -104068 | sc-eQTL | 3.02e-04 | 0.64 | 0.174 | 0.05 | CD4_CTL | L2 |
| ENSG00000272145 | NFYC-AS1 | -538167 | sc-eQTL | 2.97e-01 | -0.196 | 0.187 | 0.05 | CD4_CTL | L2 |
| ENSG00000043514 | TRIT1 | 270388 | sc-eQTL | 5.75e-01 | -0.124 | 0.22 | 0.067 | PB | L2 |
| ENSG00000049089 | COL9A2 | -163914 | sc-eQTL | 8.67e-01 | 0.0325 | 0.194 | 0.067 | PB | L2 |
| ENSG00000066136 | NFYC | -537749 | sc-eQTL | 8.71e-02 | 0.359 | 0.208 | 0.067 | PB | L2 |
| ENSG00000084070 | SMAP2 | -190951 | sc-eQTL | 3.32e-01 | 0.148 | 0.152 | 0.067 | PB | L2 |
| ENSG00000084072 | PPIE | 461717 | sc-eQTL | 5.56e-01 | -0.117 | 0.197 | 0.067 | PB | L2 |
| ENSG00000084073 | ZMPSTE24 | -104337 | sc-eQTL | 4.21e-01 | -0.145 | 0.179 | 0.067 | PB | L2 |
| ENSG00000090621 | PABPC4 | 577109 | sc-eQTL | 3.01e-01 | 0.124 | 0.119 | 0.067 | PB | L2 |
| ENSG00000116985 | BMP8B | 365034 | sc-eQTL | 6.77e-01 | -0.0577 | 0.138 | 0.067 | PB | L2 |
| ENSG00000117000 | RLF | -7488 | sc-eQTL | 4.29e-01 | 0.176 | 0.222 | 0.067 | PB | L2 |
| ENSG00000117010 | ZNF684 | -377674 | sc-eQTL | 7.35e-01 | 0.0627 | 0.185 | 0.067 | PB | L2 |
| ENSG00000131236 | CAP1 | 113666 | sc-eQTL | 3.69e-01 | 0.167 | 0.185 | 0.067 | PB | L2 |
| ENSG00000131238 | PPT1 | 56172 | sc-eQTL | 5.36e-01 | 0.126 | 0.203 | 0.067 | PB | L2 |
| ENSG00000164002 | EXO5 | -354842 | sc-eQTL | 3.47e-01 | 0.192 | 0.203 | 0.067 | PB | L2 |
| ENSG00000171793 | CTPS1 | -825789 | sc-eQTL | 2.50e-02 | -0.475 | 0.209 | 0.067 | PB | L2 |
| ENSG00000179862 | CITED4 | -708464 | sc-eQTL | 8.04e-01 | -0.047 | 0.189 | 0.067 | PB | L2 |
| ENSG00000187815 | ZFP69 | -323391 | sc-eQTL | 1.34e-01 | 0.299 | 0.198 | 0.067 | PB | L2 |
| ENSG00000198754 | OXCT2 | 382551 | sc-eQTL | 4.18e-02 | 0.362 | 0.176 | 0.067 | PB | L2 |
| ENSG00000259943 | AL050341.2 | -104068 | sc-eQTL | 6.50e-01 | -0.0957 | 0.211 | 0.067 | PB | L2 |
| ENSG00000272145 | NFYC-AS1 | -538167 | sc-eQTL | 5.54e-01 | -0.118 | 0.198 | 0.067 | PB | L2 |
|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|
|
Gene ID
|
Gene Symbol |
TSS Distance
|
Category |
P-value |
Effect Size
|
Effect Size (se)
|
PIP (SuSiE)
|
PIP (FINEMAP)
|
MAF
|
|---|---|---|---|---|---|---|---|---|---|
| ENSG00000066136 | NFYC | -537790 | eQTL | 0.0455 | -0.0419 | 0.0209 | 0.0 | 0.0 | 0.0481 |
| ENSG00000116983 | HPCAL4 | 462414 | eQTL | 0.033 | -0.0727 | 0.034 | 0.0 | 0.0 | 0.0481 |
| ENSG00000117000 | RLF | -7488 | eQTL | 3.15e-14 | 0.2 | 0.0259 | 0.00254 | 0.00247 | 0.0481 |
| ENSG00000117013 | KCNQ4 | -629888 | eQTL | 5.18e-03 | -0.227 | 0.081 | 0.0 | 0.0 | 0.0481 |
| ENSG00000131238 | PPT1 | 56172 | eQTL | 1.87e-27 | 0.706 | 0.063 | 0.0 | 0.0 | 0.0481 |
| ENSG00000164002 | EXO5 | -354842 | eQTL | 1.60e-02 | -0.119 | 0.0493 | 0.0 | 0.0 | 0.0481 |
| ENSG00000168389 | MFSD2A | 198787 | eQTL | 0.0322 | -0.0861 | 0.0401 | 0.0 | 0.0 | 0.0481 |
| ENSG00000259943 | AL050341.2 | -104068 | eQTL | 6.07e-08 | -0.245 | 0.0449 | 0.0 | 0.0 | 0.0481 |
|
Gene ID
|
Gene Symbol |
TSS Distance
|
Whole Blood |
Muscle Skeletal |
Liver |
Brain Cerebellum |
Prostate |
Spleen |
Skin Sun Exposed Lower leg |
Artery Coronary |
Esophagus Muscularis |
Esophagus Gastroesophageal Junction |
Artery Tibial |
Heart Atrial Appendage |
Nerve Tibial |
Heart Left Ventricle |
Adrenal Gland |
Adipose Visceral Omentum |
Pancreas |
Lung |
Pituitary |
Brain Nucleus accumbens basal ganglia |
Colon Transverse |
Adipose Subcutaneous |
Esophagus Mucosa |
Brain Cortex |
Thyroid |
Stomach |
Breast Mammary Tissue |
Colon Sigmoid |
Skin Not Sun Exposed Suprapubic |
Testis |
Artery Aorta |
Brain Amygdala |
Brain Anterior cingulate cortex BA24 |
Brain Caudate basal ganglia |
Brain Cerebellar Hemisphere |
Brain Frontal Cortex BA9 |
Brain Hippocampus |
Brain Hypothalamus |
Brain Putamen basal ganglia |
Brain Spinal cord cervical c-1 |
Brain Substantia nigra |
Cells Cultured fibroblasts |
Cells EBV-transformed lymphocytes |
Kidney Cortex |
Minor Salivary Gland |
Ovary |
Small Intestine Terminal Ileum |
Uterus |
Vagina |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ENSG00000084073 | \N | -104337 | 1.25e-05 | 1.13e-05 | 1.51e-06 | 6.16e-06 | 2.4e-06 | 5.07e-06 | 1.19e-05 | 1.86e-06 | 9.97e-06 | 5.16e-06 | 1.23e-05 | 5.06e-06 | 1.58e-05 | 3.65e-06 | 3.14e-06 | 6.54e-06 | 4.16e-06 | 7.75e-06 | 2.61e-06 | 2.81e-06 | 5.14e-06 | 1.04e-05 | 7.99e-06 | 3.26e-06 | 1.31e-05 | 3.98e-06 | 4.82e-06 | 4.05e-06 | 1.15e-05 | 7.9e-06 | 6.4e-06 | 9.62e-07 | 1.25e-06 | 3.06e-06 | 4.09e-06 | 2.09e-06 | 1.64e-06 | 1.89e-06 | 2.02e-06 | 1.01e-06 | 8.43e-07 | 1.29e-05 | 1.6e-06 | 1.68e-07 | 7.05e-07 | 1.61e-06 | 1.25e-06 | 7.51e-07 | 5.39e-07 |
| ENSG00000117000 | RLF | -7488 | 5.12e-05 | 2.61e-05 | 5.66e-06 | 1.27e-05 | 3.99e-06 | 1.44e-05 | 3.49e-05 | 3.39e-06 | 2.44e-05 | 1.19e-05 | 2.93e-05 | 9.68e-06 | 3.98e-05 | 1.06e-05 | 5.88e-06 | 1.54e-05 | 1.1e-05 | 2.16e-05 | 6.6e-06 | 4.8e-06 | 1.21e-05 | 2.83e-05 | 2.49e-05 | 7.06e-06 | 3.35e-05 | 6.43e-06 | 9.85e-06 | 9.19e-06 | 2.71e-05 | 2.06e-05 | 1.59e-05 | 1.67e-06 | 2.23e-06 | 6.01e-06 | 8.41e-06 | 4.37e-06 | 2.37e-06 | 2.82e-06 | 3.62e-06 | 2.93e-06 | 1.48e-06 | 3.29e-05 | 3.47e-06 | 1.95e-07 | 2.04e-06 | 2.8e-06 | 3.33e-06 | 1.47e-06 | 1.06e-06 |
| ENSG00000117016 | \N | -511783 | 1.21e-06 | 8.97e-07 | 2.89e-07 | 4.15e-07 | 1.64e-07 | 4.39e-07 | 8.36e-07 | 1.62e-07 | 9.02e-07 | 2.77e-07 | 1.1e-06 | 5.28e-07 | 1.33e-06 | 2.09e-07 | 4.15e-07 | 3.96e-07 | 5.63e-07 | 5.31e-07 | 3.84e-07 | 3.06e-07 | 3.24e-07 | 6.48e-07 | 6.1e-07 | 3.27e-07 | 1.46e-06 | 2.48e-07 | 4.7e-07 | 4.59e-07 | 8.24e-07 | 9.25e-07 | 4.65e-07 | 1.52e-07 | 1.21e-07 | 4.51e-07 | 3.24e-07 | 2.58e-07 | 3.14e-07 | 2.24e-07 | 1.83e-07 | 7.66e-08 | 1.97e-07 | 1.08e-06 | 5.81e-08 | 4.23e-08 | 1.93e-07 | 7.57e-08 | 1.43e-07 | 8.8e-08 | 9.42e-08 |
| ENSG00000131238 | PPT1 | 56172 | 2.26e-05 | 1.55e-05 | 2.63e-06 | 8.67e-06 | 2.33e-06 | 7.21e-06 | 2.07e-05 | 2.14e-06 | 1.51e-05 | 6.76e-06 | 1.85e-05 | 6.49e-06 | 2.57e-05 | 5.4e-06 | 4.55e-06 | 9.17e-06 | 6.9e-06 | 1.22e-05 | 3.6e-06 | 3.09e-06 | 7e-06 | 1.47e-05 | 1.36e-05 | 3.99e-06 | 2.29e-05 | 5.11e-06 | 7.6e-06 | 5.78e-06 | 1.66e-05 | 1.2e-05 | 1.04e-05 | 1.08e-06 | 1.29e-06 | 3.93e-06 | 5.55e-06 | 2.78e-06 | 1.79e-06 | 2.12e-06 | 2.22e-06 | 1.76e-06 | 1e-06 | 1.97e-05 | 2.71e-06 | 1.52e-07 | 1.04e-06 | 1.96e-06 | 1.91e-06 | 6.86e-07 | 4.43e-07 |
| ENSG00000259943 | AL050341.2 | -104068 | 1.25e-05 | 1.13e-05 | 1.51e-06 | 6.16e-06 | 2.4e-06 | 5.08e-06 | 1.19e-05 | 1.85e-06 | 9.81e-06 | 5.31e-06 | 1.23e-05 | 5.06e-06 | 1.58e-05 | 3.65e-06 | 3.14e-06 | 6.62e-06 | 4.11e-06 | 7.69e-06 | 2.66e-06 | 2.81e-06 | 5.1e-06 | 1.04e-05 | 8.08e-06 | 3.26e-06 | 1.31e-05 | 4.03e-06 | 4.82e-06 | 4.05e-06 | 1.15e-05 | 7.86e-06 | 6.4e-06 | 9.62e-07 | 1.25e-06 | 3.14e-06 | 4.14e-06 | 2.09e-06 | 1.64e-06 | 1.89e-06 | 2.02e-06 | 1.01e-06 | 8.43e-07 | 1.31e-05 | 1.61e-06 | 1.68e-07 | 7.05e-07 | 1.61e-06 | 1.25e-06 | 7.76e-07 | 5.24e-07 |
| ENSG00000261798 | \N | 364923 | 1.55e-06 | 1.4e-06 | 2.74e-07 | 1.27e-06 | 4.18e-07 | 7.17e-07 | 1.19e-06 | 3.85e-07 | 1.7e-06 | 6.82e-07 | 2e-06 | 8.75e-07 | 2.64e-06 | 4.19e-07 | 4.37e-07 | 9.54e-07 | 9.41e-07 | 1.09e-06 | 5.78e-07 | 5.13e-07 | 6.34e-07 | 1.96e-06 | 1.27e-06 | 5.91e-07 | 2.39e-06 | 7.73e-07 | 1.03e-06 | 8.69e-07 | 1.75e-06 | 1.32e-06 | 7.35e-07 | 2.74e-07 | 3e-07 | 6.49e-07 | 6.29e-07 | 5.06e-07 | 7.58e-07 | 4.12e-07 | 4.96e-07 | 2.28e-07 | 2.59e-07 | 2.07e-06 | 4.11e-07 | 1.66e-07 | 3.14e-07 | 3.05e-07 | 2.42e-07 | 2.44e-07 | 2.84e-07 |