|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|
|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|---|---|---|---|---|---|---|---|---|
| ENSG00000043514 | TRIT1 | 236141 | sc-eQTL | 5.38e-01 | -0.117 | 0.19 | 0.05 | CD4_CTL | L2 |
| ENSG00000049089 | COL9A2 | -198161 | sc-eQTL | 6.73e-01 | -0.0615 | 0.146 | 0.05 | CD4_CTL | L2 |
| ENSG00000066136 | NFYC | -571996 | sc-eQTL | 6.83e-01 | 0.0821 | 0.201 | 0.05 | CD4_CTL | L2 |
| ENSG00000084070 | SMAP2 | -225198 | sc-eQTL | 3.79e-01 | -0.114 | 0.13 | 0.05 | CD4_CTL | L2 |
| ENSG00000084072 | PPIE | 427470 | sc-eQTL | 6.79e-01 | -0.0823 | 0.199 | 0.05 | CD4_CTL | L2 |
| ENSG00000084073 | ZMPSTE24 | -138584 | sc-eQTL | 8.09e-01 | -0.0482 | 0.199 | 0.05 | CD4_CTL | L2 |
| ENSG00000090621 | PABPC4 | 542862 | sc-eQTL | 3.13e-01 | -0.186 | 0.184 | 0.05 | CD4_CTL | L2 |
| ENSG00000116983 | HPCAL4 | 428167 | sc-eQTL | 5.76e-01 | -0.0969 | 0.173 | 0.05 | CD4_CTL | L2 |
| ENSG00000117000 | RLF | -41735 | sc-eQTL | 7.57e-01 | -0.059 | 0.191 | 0.05 | CD4_CTL | L2 |
| ENSG00000117010 | ZNF684 | -411921 | sc-eQTL | 8.18e-01 | 0.0414 | 0.18 | 0.05 | CD4_CTL | L2 |
| ENSG00000131236 | CAP1 | 79419 | sc-eQTL | 6.39e-03 | 0.349 | 0.126 | 0.05 | CD4_CTL | L2 |
| ENSG00000131238 | PPT1 | 21925 | sc-eQTL | 3.38e-01 | 0.192 | 0.2 | 0.05 | CD4_CTL | L2 |
| ENSG00000164002 | EXO5 | -389089 | sc-eQTL | 5.48e-01 | 0.113 | 0.188 | 0.05 | CD4_CTL | L2 |
| ENSG00000171793 | CTPS1 | -860036 | sc-eQTL | 7.24e-01 | -0.0651 | 0.184 | 0.05 | CD4_CTL | L2 |
| ENSG00000179862 | CITED4 | -742711 | sc-eQTL | 8.46e-01 | 0.0306 | 0.158 | 0.05 | CD4_CTL | L2 |
| ENSG00000187801 | ZFP69B | -330450 | sc-eQTL | 6.54e-01 | -0.0765 | 0.17 | 0.05 | CD4_CTL | L2 |
| ENSG00000187815 | ZFP69 | -357638 | sc-eQTL | 5.34e-01 | 0.115 | 0.185 | 0.05 | CD4_CTL | L2 |
| ENSG00000259943 | AL050341.2 | -138315 | sc-eQTL | 3.02e-04 | 0.64 | 0.174 | 0.05 | CD4_CTL | L2 |
| ENSG00000272145 | NFYC-AS1 | -572414 | sc-eQTL | 2.97e-01 | -0.196 | 0.187 | 0.05 | CD4_CTL | L2 |
| ENSG00000043514 | TRIT1 | 236141 | sc-eQTL | 5.75e-01 | -0.124 | 0.22 | 0.067 | PB | L2 |
| ENSG00000049089 | COL9A2 | -198161 | sc-eQTL | 8.67e-01 | 0.0325 | 0.194 | 0.067 | PB | L2 |
| ENSG00000066136 | NFYC | -571996 | sc-eQTL | 8.71e-02 | 0.359 | 0.208 | 0.067 | PB | L2 |
| ENSG00000084070 | SMAP2 | -225198 | sc-eQTL | 3.32e-01 | 0.148 | 0.152 | 0.067 | PB | L2 |
| ENSG00000084072 | PPIE | 427470 | sc-eQTL | 5.56e-01 | -0.117 | 0.197 | 0.067 | PB | L2 |
| ENSG00000084073 | ZMPSTE24 | -138584 | sc-eQTL | 4.21e-01 | -0.145 | 0.179 | 0.067 | PB | L2 |
| ENSG00000090621 | PABPC4 | 542862 | sc-eQTL | 3.01e-01 | 0.124 | 0.119 | 0.067 | PB | L2 |
| ENSG00000116985 | BMP8B | 330787 | sc-eQTL | 6.77e-01 | -0.0577 | 0.138 | 0.067 | PB | L2 |
| ENSG00000117000 | RLF | -41735 | sc-eQTL | 4.29e-01 | 0.176 | 0.222 | 0.067 | PB | L2 |
| ENSG00000117010 | ZNF684 | -411921 | sc-eQTL | 7.35e-01 | 0.0627 | 0.185 | 0.067 | PB | L2 |
| ENSG00000131236 | CAP1 | 79419 | sc-eQTL | 3.69e-01 | 0.167 | 0.185 | 0.067 | PB | L2 |
| ENSG00000131238 | PPT1 | 21925 | sc-eQTL | 5.36e-01 | 0.126 | 0.203 | 0.067 | PB | L2 |
| ENSG00000164002 | EXO5 | -389089 | sc-eQTL | 3.47e-01 | 0.192 | 0.203 | 0.067 | PB | L2 |
| ENSG00000171793 | CTPS1 | -860036 | sc-eQTL | 2.50e-02 | -0.475 | 0.209 | 0.067 | PB | L2 |
| ENSG00000179862 | CITED4 | -742711 | sc-eQTL | 8.04e-01 | -0.047 | 0.189 | 0.067 | PB | L2 |
| ENSG00000187815 | ZFP69 | -357638 | sc-eQTL | 1.34e-01 | 0.299 | 0.198 | 0.067 | PB | L2 |
| ENSG00000198754 | OXCT2 | 348304 | sc-eQTL | 4.18e-02 | 0.362 | 0.176 | 0.067 | PB | L2 |
| ENSG00000259943 | AL050341.2 | -138315 | sc-eQTL | 6.50e-01 | -0.0957 | 0.211 | 0.067 | PB | L2 |
| ENSG00000272145 | NFYC-AS1 | -572414 | sc-eQTL | 5.54e-01 | -0.118 | 0.198 | 0.067 | PB | L2 |
|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|
|
Gene ID
|
Gene Symbol |
TSS Distance
|
Category |
P-value |
Effect Size
|
Effect Size (se)
|
PIP (SuSiE)
|
PIP (FINEMAP)
|
MAF
|
|---|---|---|---|---|---|---|---|---|---|
| ENSG00000066136 | NFYC | -572037 | eQTL | 0.0459 | -0.0419 | 0.0209 | 0.0 | 0.0 | 0.0481 |
| ENSG00000116983 | HPCAL4 | 428167 | eQTL | 0.0327 | -0.0729 | 0.0341 | 0.0 | 0.0 | 0.0481 |
| ENSG00000117000 | RLF | -41735 | eQTL | 3.09e-14 | 0.2 | 0.0259 | 0.00257 | 0.00252 | 0.0481 |
| ENSG00000117013 | KCNQ4 | -664135 | eQTL | 5.29e-03 | -0.227 | 0.0811 | 0.0 | 0.0 | 0.0481 |
| ENSG00000131238 | PPT1 | 21925 | eQTL | 1.88e-27 | 0.707 | 0.0631 | 0.0 | 0.0 | 0.0481 |
| ENSG00000164002 | EXO5 | -389089 | eQTL | 1.61e-02 | -0.119 | 0.0494 | 0.0 | 0.0 | 0.0481 |
| ENSG00000168389 | MFSD2A | 164540 | eQTL | 0.0318 | -0.0864 | 0.0402 | 0.0 | 0.0 | 0.0481 |
| ENSG00000259943 | AL050341.2 | -138315 | eQTL | 6.23e-08 | -0.245 | 0.045 | 0.0 | 0.0 | 0.0481 |
|
Gene ID
|
Gene Symbol |
TSS Distance
|
Whole Blood |
Muscle Skeletal |
Liver |
Brain Cerebellum |
Prostate |
Spleen |
Skin Sun Exposed Lower leg |
Artery Coronary |
Esophagus Muscularis |
Esophagus Gastroesophageal Junction |
Artery Tibial |
Heart Atrial Appendage |
Nerve Tibial |
Heart Left Ventricle |
Adrenal Gland |
Adipose Visceral Omentum |
Pancreas |
Lung |
Pituitary |
Brain Nucleus accumbens basal ganglia |
Colon Transverse |
Adipose Subcutaneous |
Esophagus Mucosa |
Brain Cortex |
Thyroid |
Stomach |
Breast Mammary Tissue |
Colon Sigmoid |
Skin Not Sun Exposed Suprapubic |
Testis |
Artery Aorta |
Brain Amygdala |
Brain Anterior cingulate cortex BA24 |
Brain Caudate basal ganglia |
Brain Cerebellar Hemisphere |
Brain Frontal Cortex BA9 |
Brain Hippocampus |
Brain Hypothalamus |
Brain Putamen basal ganglia |
Brain Spinal cord cervical c-1 |
Brain Substantia nigra |
Cells Cultured fibroblasts |
Cells EBV-transformed lymphocytes |
Kidney Cortex |
Minor Salivary Gland |
Ovary |
Small Intestine Terminal Ileum |
Uterus |
Vagina |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ENSG00000084073 | \N | -138584 | 4.65e-06 | 5.05e-06 | 6.52e-07 | 3.15e-06 | 8.79e-07 | 1.71e-06 | 4.31e-06 | 9.96e-07 | 4.88e-06 | 2.06e-06 | 5.38e-06 | 3.36e-06 | 7.06e-06 | 2.37e-06 | 1.3e-06 | 2.49e-06 | 1.99e-06 | 2.88e-06 | 1.27e-06 | 9.89e-07 | 1.92e-06 | 4.25e-06 | 3.49e-06 | 1.71e-06 | 6.44e-06 | 1.36e-06 | 2.53e-06 | 1.51e-06 | 4.26e-06 | 4.15e-06 | 2.54e-06 | 5.76e-07 | 7.5e-07 | 1.6e-06 | 1.98e-06 | 9.08e-07 | 9.07e-07 | 4.74e-07 | 1.3e-06 | 3.42e-07 | 2.78e-07 | 5.74e-06 | 3.63e-07 | 1.64e-07 | 3.44e-07 | 3.41e-07 | 6.63e-07 | 2.41e-07 | 1.41e-07 |
| ENSG00000117000 | RLF | -41735 | 1.13e-05 | 1.22e-05 | 1.29e-06 | 6.9e-06 | 2.36e-06 | 5.21e-06 | 1.19e-05 | 2.2e-06 | 1.03e-05 | 5.36e-06 | 1.41e-05 | 5.73e-06 | 1.8e-05 | 3.63e-06 | 2.89e-06 | 6.33e-06 | 4.73e-06 | 8.03e-06 | 2.58e-06 | 2.82e-06 | 5.19e-06 | 1.02e-05 | 9.02e-06 | 3.36e-06 | 1.71e-05 | 4.12e-06 | 5.93e-06 | 4.05e-06 | 1.12e-05 | 9.11e-06 | 6.4e-06 | 9.99e-07 | 1.14e-06 | 3.36e-06 | 5.32e-06 | 2.59e-06 | 1.65e-06 | 1.89e-06 | 1.72e-06 | 9.35e-07 | 1.02e-06 | 1.39e-05 | 1.4e-06 | 1.92e-07 | 7.71e-07 | 1.72e-06 | 1.47e-06 | 7.42e-07 | 5.64e-07 |
| ENSG00000117016 | \N | -546030 | 1.01e-06 | 6.46e-07 | 1.12e-07 | 4.43e-07 | 9.16e-08 | 2.95e-07 | 6.06e-07 | 1.55e-07 | 4.43e-07 | 2.37e-07 | 9.07e-07 | 3.62e-07 | 9.57e-07 | 1.6e-07 | 2.18e-07 | 2.1e-07 | 3.52e-07 | 3.95e-07 | 2.51e-07 | 1.69e-07 | 2.01e-07 | 3.8e-07 | 3.77e-07 | 1.8e-07 | 1.06e-06 | 2.34e-07 | 4.16e-07 | 2.71e-07 | 3.88e-07 | 6.73e-07 | 3.32e-07 | 4.03e-08 | 5.63e-08 | 1.88e-07 | 3.28e-07 | 1.36e-07 | 1.01e-07 | 1.23e-07 | 7.72e-08 | 1.58e-08 | 1.03e-07 | 5.96e-07 | 5.58e-08 | 8.98e-08 | 1.48e-07 | 1.44e-08 | 1.03e-07 | 3.84e-08 | 5.65e-08 |
| ENSG00000131238 | PPT1 | 21925 | 1.8e-05 | 1.71e-05 | 2.73e-06 | 9.91e-06 | 2.44e-06 | 7.88e-06 | 2.11e-05 | 2.96e-06 | 1.64e-05 | 7.58e-06 | 2.08e-05 | 7.98e-06 | 2.79e-05 | 6.24e-06 | 4.72e-06 | 9.23e-06 | 8.25e-06 | 1.37e-05 | 3.87e-06 | 4.21e-06 | 7.27e-06 | 1.58e-05 | 1.56e-05 | 4.52e-06 | 2.61e-05 | 5.22e-06 | 7.96e-06 | 6.3e-06 | 1.64e-05 | 1.43e-05 | 1.08e-05 | 9.89e-07 | 1.31e-06 | 4.05e-06 | 7.28e-06 | 3.37e-06 | 1.77e-06 | 2.43e-06 | 2.2e-06 | 1.73e-06 | 1.21e-06 | 2.07e-05 | 2.52e-06 | 2.27e-07 | 1.09e-06 | 2.36e-06 | 2.53e-06 | 7.24e-07 | 4.57e-07 |
| ENSG00000259943 | AL050341.2 | -138315 | 4.65e-06 | 5.05e-06 | 6.52e-07 | 3.09e-06 | 8.79e-07 | 1.71e-06 | 4.31e-06 | 9.96e-07 | 4.92e-06 | 2.06e-06 | 5.38e-06 | 3.36e-06 | 7.06e-06 | 2.39e-06 | 1.26e-06 | 2.49e-06 | 1.99e-06 | 2.88e-06 | 1.27e-06 | 9.89e-07 | 1.9e-06 | 4.25e-06 | 3.51e-06 | 1.71e-06 | 6.44e-06 | 1.36e-06 | 2.51e-06 | 1.51e-06 | 4.26e-06 | 4.15e-06 | 2.54e-06 | 5.76e-07 | 7.5e-07 | 1.6e-06 | 1.98e-06 | 9.08e-07 | 9.07e-07 | 4.74e-07 | 1.3e-06 | 3.42e-07 | 2.78e-07 | 5.74e-06 | 3.63e-07 | 1.64e-07 | 3.44e-07 | 3.41e-07 | 6.63e-07 | 2.41e-07 | 1.41e-07 |
| ENSG00000261798 | \N | 330676 | 1.39e-06 | 1.27e-06 | 3.21e-07 | 1.26e-06 | 3.46e-07 | 6.28e-07 | 1.5e-06 | 3.9e-07 | 1.41e-06 | 5.19e-07 | 2.06e-06 | 7.53e-07 | 2.55e-06 | 2.98e-07 | 5.4e-07 | 8.79e-07 | 8.94e-07 | 7.21e-07 | 8.83e-07 | 6.52e-07 | 6.56e-07 | 1.63e-06 | 8.98e-07 | 5.77e-07 | 2.41e-06 | 4.39e-07 | 1.02e-06 | 7.19e-07 | 1.48e-06 | 1.19e-06 | 7.58e-07 | 2.96e-07 | 2.56e-07 | 5.71e-07 | 6.99e-07 | 4.62e-07 | 6.41e-07 | 2.87e-07 | 4.8e-07 | 3.15e-07 | 2.72e-07 | 1.65e-06 | 1.53e-07 | 1.95e-07 | 1.67e-07 | 1.12e-07 | 2.36e-07 | 5.98e-08 | 9.59e-08 |