|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|
|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|---|---|---|---|---|---|---|---|---|
| ENSG00000043514 | TRIT1 | 235871 | sc-eQTL | 5.38e-01 | -0.117 | 0.19 | 0.05 | CD4_CTL | L2 |
| ENSG00000049089 | COL9A2 | -198431 | sc-eQTL | 6.73e-01 | -0.0615 | 0.146 | 0.05 | CD4_CTL | L2 |
| ENSG00000066136 | NFYC | -572266 | sc-eQTL | 6.83e-01 | 0.0821 | 0.201 | 0.05 | CD4_CTL | L2 |
| ENSG00000084070 | SMAP2 | -225468 | sc-eQTL | 3.79e-01 | -0.114 | 0.13 | 0.05 | CD4_CTL | L2 |
| ENSG00000084072 | PPIE | 427200 | sc-eQTL | 6.79e-01 | -0.0823 | 0.199 | 0.05 | CD4_CTL | L2 |
| ENSG00000084073 | ZMPSTE24 | -138854 | sc-eQTL | 8.09e-01 | -0.0482 | 0.199 | 0.05 | CD4_CTL | L2 |
| ENSG00000090621 | PABPC4 | 542592 | sc-eQTL | 3.13e-01 | -0.186 | 0.184 | 0.05 | CD4_CTL | L2 |
| ENSG00000116983 | HPCAL4 | 427897 | sc-eQTL | 5.76e-01 | -0.0969 | 0.173 | 0.05 | CD4_CTL | L2 |
| ENSG00000117000 | RLF | -42005 | sc-eQTL | 7.57e-01 | -0.059 | 0.191 | 0.05 | CD4_CTL | L2 |
| ENSG00000117010 | ZNF684 | -412191 | sc-eQTL | 8.18e-01 | 0.0414 | 0.18 | 0.05 | CD4_CTL | L2 |
| ENSG00000131236 | CAP1 | 79149 | sc-eQTL | 6.39e-03 | 0.349 | 0.126 | 0.05 | CD4_CTL | L2 |
| ENSG00000131238 | PPT1 | 21655 | sc-eQTL | 3.38e-01 | 0.192 | 0.2 | 0.05 | CD4_CTL | L2 |
| ENSG00000164002 | EXO5 | -389359 | sc-eQTL | 5.48e-01 | 0.113 | 0.188 | 0.05 | CD4_CTL | L2 |
| ENSG00000171793 | CTPS1 | -860306 | sc-eQTL | 7.24e-01 | -0.0651 | 0.184 | 0.05 | CD4_CTL | L2 |
| ENSG00000179862 | CITED4 | -742981 | sc-eQTL | 8.46e-01 | 0.0306 | 0.158 | 0.05 | CD4_CTL | L2 |
| ENSG00000187801 | ZFP69B | -330720 | sc-eQTL | 6.54e-01 | -0.0765 | 0.17 | 0.05 | CD4_CTL | L2 |
| ENSG00000187815 | ZFP69 | -357908 | sc-eQTL | 5.34e-01 | 0.115 | 0.185 | 0.05 | CD4_CTL | L2 |
| ENSG00000259943 | AL050341.2 | -138585 | sc-eQTL | 3.02e-04 | 0.64 | 0.174 | 0.05 | CD4_CTL | L2 |
| ENSG00000272145 | NFYC-AS1 | -572684 | sc-eQTL | 2.97e-01 | -0.196 | 0.187 | 0.05 | CD4_CTL | L2 |
| ENSG00000043514 | TRIT1 | 235871 | sc-eQTL | 5.75e-01 | -0.124 | 0.22 | 0.067 | PB | L2 |
| ENSG00000049089 | COL9A2 | -198431 | sc-eQTL | 8.67e-01 | 0.0325 | 0.194 | 0.067 | PB | L2 |
| ENSG00000066136 | NFYC | -572266 | sc-eQTL | 8.71e-02 | 0.359 | 0.208 | 0.067 | PB | L2 |
| ENSG00000084070 | SMAP2 | -225468 | sc-eQTL | 3.32e-01 | 0.148 | 0.152 | 0.067 | PB | L2 |
| ENSG00000084072 | PPIE | 427200 | sc-eQTL | 5.56e-01 | -0.117 | 0.197 | 0.067 | PB | L2 |
| ENSG00000084073 | ZMPSTE24 | -138854 | sc-eQTL | 4.21e-01 | -0.145 | 0.179 | 0.067 | PB | L2 |
| ENSG00000090621 | PABPC4 | 542592 | sc-eQTL | 3.01e-01 | 0.124 | 0.119 | 0.067 | PB | L2 |
| ENSG00000116985 | BMP8B | 330517 | sc-eQTL | 6.77e-01 | -0.0577 | 0.138 | 0.067 | PB | L2 |
| ENSG00000117000 | RLF | -42005 | sc-eQTL | 4.29e-01 | 0.176 | 0.222 | 0.067 | PB | L2 |
| ENSG00000117010 | ZNF684 | -412191 | sc-eQTL | 7.35e-01 | 0.0627 | 0.185 | 0.067 | PB | L2 |
| ENSG00000131236 | CAP1 | 79149 | sc-eQTL | 3.69e-01 | 0.167 | 0.185 | 0.067 | PB | L2 |
| ENSG00000131238 | PPT1 | 21655 | sc-eQTL | 5.36e-01 | 0.126 | 0.203 | 0.067 | PB | L2 |
| ENSG00000164002 | EXO5 | -389359 | sc-eQTL | 3.47e-01 | 0.192 | 0.203 | 0.067 | PB | L2 |
| ENSG00000171793 | CTPS1 | -860306 | sc-eQTL | 2.50e-02 | -0.475 | 0.209 | 0.067 | PB | L2 |
| ENSG00000179862 | CITED4 | -742981 | sc-eQTL | 8.04e-01 | -0.047 | 0.189 | 0.067 | PB | L2 |
| ENSG00000187815 | ZFP69 | -357908 | sc-eQTL | 1.34e-01 | 0.299 | 0.198 | 0.067 | PB | L2 |
| ENSG00000198754 | OXCT2 | 348034 | sc-eQTL | 4.18e-02 | 0.362 | 0.176 | 0.067 | PB | L2 |
| ENSG00000259943 | AL050341.2 | -138585 | sc-eQTL | 6.50e-01 | -0.0957 | 0.211 | 0.067 | PB | L2 |
| ENSG00000272145 | NFYC-AS1 | -572684 | sc-eQTL | 5.54e-01 | -0.118 | 0.198 | 0.067 | PB | L2 |
|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|
|
Gene ID
|
Gene Symbol |
TSS Distance
|
Category |
P-value |
Effect Size
|
Effect Size (se)
|
PIP (SuSiE)
|
PIP (FINEMAP)
|
MAF
|
|---|---|---|---|---|---|---|---|---|---|
| ENSG00000066136 | NFYC | -572307 | eQTL | 0.0459 | -0.0419 | 0.0209 | 0.0 | 0.0 | 0.0481 |
| ENSG00000116983 | HPCAL4 | 427897 | eQTL | 0.0327 | -0.0729 | 0.0341 | 0.0 | 0.0 | 0.0481 |
| ENSG00000117000 | RLF | -42005 | eQTL | 3.09e-14 | 0.2 | 0.0259 | 0.00257 | 0.00252 | 0.0481 |
| ENSG00000117013 | KCNQ4 | -664405 | eQTL | 5.29e-03 | -0.227 | 0.0811 | 0.0 | 0.0 | 0.0481 |
| ENSG00000131238 | PPT1 | 21655 | eQTL | 1.88e-27 | 0.707 | 0.0631 | 0.0 | 0.0 | 0.0481 |
| ENSG00000164002 | EXO5 | -389359 | eQTL | 1.61e-02 | -0.119 | 0.0494 | 0.0 | 0.0 | 0.0481 |
| ENSG00000168389 | MFSD2A | 164270 | eQTL | 0.0318 | -0.0864 | 0.0402 | 0.0 | 0.0 | 0.0481 |
| ENSG00000259943 | AL050341.2 | -138585 | eQTL | 6.23e-08 | -0.245 | 0.045 | 0.0 | 0.0 | 0.0481 |
|
Gene ID
|
Gene Symbol |
TSS Distance
|
Whole Blood |
Muscle Skeletal |
Liver |
Brain Cerebellum |
Prostate |
Spleen |
Skin Sun Exposed Lower leg |
Artery Coronary |
Esophagus Muscularis |
Esophagus Gastroesophageal Junction |
Artery Tibial |
Heart Atrial Appendage |
Nerve Tibial |
Heart Left Ventricle |
Adrenal Gland |
Adipose Visceral Omentum |
Pancreas |
Lung |
Pituitary |
Brain Nucleus accumbens basal ganglia |
Colon Transverse |
Adipose Subcutaneous |
Esophagus Mucosa |
Brain Cortex |
Thyroid |
Stomach |
Breast Mammary Tissue |
Colon Sigmoid |
Skin Not Sun Exposed Suprapubic |
Testis |
Artery Aorta |
Brain Amygdala |
Brain Anterior cingulate cortex BA24 |
Brain Caudate basal ganglia |
Brain Cerebellar Hemisphere |
Brain Frontal Cortex BA9 |
Brain Hippocampus |
Brain Hypothalamus |
Brain Putamen basal ganglia |
Brain Spinal cord cervical c-1 |
Brain Substantia nigra |
Cells Cultured fibroblasts |
Cells EBV-transformed lymphocytes |
Kidney Cortex |
Minor Salivary Gland |
Ovary |
Small Intestine Terminal Ileum |
Uterus |
Vagina |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ENSG00000084073 | \N | -138854 | 5.13e-06 | 5.52e-06 | 9.83e-07 | 3.36e-06 | 1.73e-06 | 1.52e-06 | 6.63e-06 | 1.51e-06 | 4.76e-06 | 3.17e-06 | 7.19e-06 | 3.01e-06 | 9.33e-06 | 1.73e-06 | 1.01e-06 | 4.41e-06 | 2.84e-06 | 3.74e-06 | 1.92e-06 | 2.23e-06 | 2.92e-06 | 6.55e-06 | 4.68e-06 | 2.32e-06 | 8.26e-06 | 2.32e-06 | 3.44e-06 | 1.71e-06 | 5.87e-06 | 4.94e-06 | 2.63e-06 | 7.72e-07 | 7.03e-07 | 2.75e-06 | 1.97e-06 | 1.7e-06 | 1.55e-06 | 8.19e-07 | 1.38e-06 | 8.61e-07 | 1e-06 | 6.44e-06 | 8.16e-07 | 1.35e-07 | 7.51e-07 | 8.07e-07 | 9.03e-07 | 7.59e-07 | 4.74e-07 |
| ENSG00000117000 | RLF | -42005 | 1.48e-05 | 1.56e-05 | 3.64e-06 | 1.06e-05 | 3.32e-06 | 8.2e-06 | 2.17e-05 | 3.72e-06 | 1.72e-05 | 8.98e-06 | 2.08e-05 | 8.37e-06 | 3.03e-05 | 6.13e-06 | 5.14e-06 | 1.03e-05 | 8.74e-06 | 1.54e-05 | 5.69e-06 | 5.19e-06 | 8.81e-06 | 1.73e-05 | 1.74e-05 | 7.06e-06 | 2.64e-05 | 5.77e-06 | 8.05e-06 | 7.73e-06 | 1.83e-05 | 1.61e-05 | 1.15e-05 | 1.65e-06 | 2.11e-06 | 6.6e-06 | 7.59e-06 | 4.51e-06 | 2.78e-06 | 2.76e-06 | 3.62e-06 | 2.84e-06 | 1.71e-06 | 1.92e-05 | 2.66e-06 | 4.38e-07 | 2.18e-06 | 2.75e-06 | 3.33e-06 | 1.49e-06 | 1.52e-06 |
| ENSG00000117016 | \N | -546300 | 1.07e-06 | 6.81e-07 | 2.89e-07 | 4.4e-07 | 9.6e-08 | 3.24e-07 | 6.29e-07 | 2.88e-07 | 8.36e-07 | 3.05e-07 | 1.03e-06 | 5.39e-07 | 1.02e-06 | 1.57e-07 | 3.94e-07 | 4.19e-07 | 6.37e-07 | 4.44e-07 | 3.48e-07 | 3.57e-07 | 2.38e-07 | 5.83e-07 | 4.74e-07 | 3.21e-07 | 1.06e-06 | 2.4e-07 | 5.04e-07 | 3.51e-07 | 5.56e-07 | 7.06e-07 | 3.79e-07 | 4.47e-08 | 6.78e-08 | 2.74e-07 | 3.8e-07 | 3.02e-07 | 2.59e-07 | 1.41e-07 | 7.63e-08 | 8.59e-09 | 1.21e-07 | 6.15e-07 | 7.37e-08 | 1.04e-08 | 1.89e-07 | 3.46e-08 | 1.82e-07 | 8.25e-08 | 4.9e-08 |
| ENSG00000131238 | PPT1 | 21655 | 3.04e-05 | 2.67e-05 | 6.39e-06 | 1.5e-05 | 5.91e-06 | 1.51e-05 | 3.71e-05 | 4.96e-06 | 2.72e-05 | 1.42e-05 | 3.34e-05 | 1.5e-05 | 4.6e-05 | 1.13e-05 | 6.59e-06 | 1.72e-05 | 1.5e-05 | 2.42e-05 | 8.31e-06 | 7.38e-06 | 1.49e-05 | 2.96e-05 | 2.78e-05 | 1.04e-05 | 3.83e-05 | 8.36e-06 | 1.33e-05 | 1.15e-05 | 3.04e-05 | 2.61e-05 | 1.73e-05 | 1.65e-06 | 3.06e-06 | 8.17e-06 | 1.11e-05 | 6.19e-06 | 3.7e-06 | 3.23e-06 | 5.61e-06 | 3.85e-06 | 1.83e-06 | 3.22e-05 | 3.46e-06 | 4.6e-07 | 2.84e-06 | 4.34e-06 | 4.33e-06 | 2.14e-06 | 1.46e-06 |
| ENSG00000259943 | AL050341.2 | -138585 | 5.13e-06 | 5.58e-06 | 9.83e-07 | 3.32e-06 | 1.71e-06 | 1.54e-06 | 6.72e-06 | 1.51e-06 | 4.76e-06 | 3.17e-06 | 7.38e-06 | 3.03e-06 | 9.33e-06 | 1.73e-06 | 9.88e-07 | 4.5e-06 | 2.92e-06 | 3.74e-06 | 1.92e-06 | 2.23e-06 | 2.93e-06 | 6.58e-06 | 4.69e-06 | 2.32e-06 | 8.26e-06 | 2.32e-06 | 3.47e-06 | 1.73e-06 | 5.95e-06 | 4.98e-06 | 2.63e-06 | 7.72e-07 | 7.03e-07 | 2.79e-06 | 1.93e-06 | 1.73e-06 | 1.55e-06 | 8.19e-07 | 1.38e-06 | 8.61e-07 | 1e-06 | 6.44e-06 | 8.15e-07 | 1.35e-07 | 7.51e-07 | 8.06e-07 | 9.03e-07 | 7.59e-07 | 4.74e-07 |
| ENSG00000261798 | \N | 330406 | 1.43e-06 | 1.29e-06 | 2.5e-07 | 1.26e-06 | 4.46e-07 | 6.06e-07 | 1.49e-06 | 4.77e-07 | 1.72e-06 | 7.25e-07 | 2.09e-06 | 1.3e-06 | 2.64e-06 | 3.29e-07 | 3.28e-07 | 1.02e-06 | 1.07e-06 | 1.09e-06 | 5.51e-07 | 7.62e-07 | 6.18e-07 | 1.83e-06 | 1.33e-06 | 8.52e-07 | 2.47e-06 | 9.68e-07 | 1.05e-06 | 8.36e-07 | 1.71e-06 | 1.23e-06 | 8.13e-07 | 2.48e-07 | 2.88e-07 | 7.48e-07 | 5.66e-07 | 6.72e-07 | 7.55e-07 | 3.27e-07 | 5.07e-07 | 2.26e-07 | 3.03e-07 | 1.65e-06 | 4.07e-07 | 1.32e-07 | 3.52e-07 | 3.04e-07 | 4.11e-07 | 2.65e-07 | 2.25e-07 |