|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|
|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|---|---|---|---|---|---|---|---|---|
| ENSG00000043514 | TRIT1 | 235487 | sc-eQTL | 5.38e-01 | -0.117 | 0.19 | 0.05 | CD4_CTL | L2 |
| ENSG00000049089 | COL9A2 | -198815 | sc-eQTL | 6.73e-01 | -0.0615 | 0.146 | 0.05 | CD4_CTL | L2 |
| ENSG00000066136 | NFYC | -572650 | sc-eQTL | 6.83e-01 | 0.0821 | 0.201 | 0.05 | CD4_CTL | L2 |
| ENSG00000084070 | SMAP2 | -225852 | sc-eQTL | 3.79e-01 | -0.114 | 0.13 | 0.05 | CD4_CTL | L2 |
| ENSG00000084072 | PPIE | 426816 | sc-eQTL | 6.79e-01 | -0.0823 | 0.199 | 0.05 | CD4_CTL | L2 |
| ENSG00000084073 | ZMPSTE24 | -139238 | sc-eQTL | 8.09e-01 | -0.0482 | 0.199 | 0.05 | CD4_CTL | L2 |
| ENSG00000090621 | PABPC4 | 542208 | sc-eQTL | 3.13e-01 | -0.186 | 0.184 | 0.05 | CD4_CTL | L2 |
| ENSG00000116983 | HPCAL4 | 427513 | sc-eQTL | 5.76e-01 | -0.0969 | 0.173 | 0.05 | CD4_CTL | L2 |
| ENSG00000117000 | RLF | -42389 | sc-eQTL | 7.57e-01 | -0.059 | 0.191 | 0.05 | CD4_CTL | L2 |
| ENSG00000117010 | ZNF684 | -412575 | sc-eQTL | 8.18e-01 | 0.0414 | 0.18 | 0.05 | CD4_CTL | L2 |
| ENSG00000131236 | CAP1 | 78765 | sc-eQTL | 6.39e-03 | 0.349 | 0.126 | 0.05 | CD4_CTL | L2 |
| ENSG00000131238 | PPT1 | 21271 | sc-eQTL | 3.38e-01 | 0.192 | 0.2 | 0.05 | CD4_CTL | L2 |
| ENSG00000164002 | EXO5 | -389743 | sc-eQTL | 5.48e-01 | 0.113 | 0.188 | 0.05 | CD4_CTL | L2 |
| ENSG00000171793 | CTPS1 | -860690 | sc-eQTL | 7.24e-01 | -0.0651 | 0.184 | 0.05 | CD4_CTL | L2 |
| ENSG00000179862 | CITED4 | -743365 | sc-eQTL | 8.46e-01 | 0.0306 | 0.158 | 0.05 | CD4_CTL | L2 |
| ENSG00000187801 | ZFP69B | -331104 | sc-eQTL | 6.54e-01 | -0.0765 | 0.17 | 0.05 | CD4_CTL | L2 |
| ENSG00000187815 | ZFP69 | -358292 | sc-eQTL | 5.34e-01 | 0.115 | 0.185 | 0.05 | CD4_CTL | L2 |
| ENSG00000259943 | AL050341.2 | -138969 | sc-eQTL | 3.02e-04 | 0.64 | 0.174 | 0.05 | CD4_CTL | L2 |
| ENSG00000272145 | NFYC-AS1 | -573068 | sc-eQTL | 2.97e-01 | -0.196 | 0.187 | 0.05 | CD4_CTL | L2 |
| ENSG00000043514 | TRIT1 | 235487 | sc-eQTL | 5.75e-01 | -0.124 | 0.22 | 0.067 | PB | L2 |
| ENSG00000049089 | COL9A2 | -198815 | sc-eQTL | 8.67e-01 | 0.0325 | 0.194 | 0.067 | PB | L2 |
| ENSG00000066136 | NFYC | -572650 | sc-eQTL | 8.71e-02 | 0.359 | 0.208 | 0.067 | PB | L2 |
| ENSG00000084070 | SMAP2 | -225852 | sc-eQTL | 3.32e-01 | 0.148 | 0.152 | 0.067 | PB | L2 |
| ENSG00000084072 | PPIE | 426816 | sc-eQTL | 5.56e-01 | -0.117 | 0.197 | 0.067 | PB | L2 |
| ENSG00000084073 | ZMPSTE24 | -139238 | sc-eQTL | 4.21e-01 | -0.145 | 0.179 | 0.067 | PB | L2 |
| ENSG00000090621 | PABPC4 | 542208 | sc-eQTL | 3.01e-01 | 0.124 | 0.119 | 0.067 | PB | L2 |
| ENSG00000116985 | BMP8B | 330133 | sc-eQTL | 6.77e-01 | -0.0577 | 0.138 | 0.067 | PB | L2 |
| ENSG00000117000 | RLF | -42389 | sc-eQTL | 4.29e-01 | 0.176 | 0.222 | 0.067 | PB | L2 |
| ENSG00000117010 | ZNF684 | -412575 | sc-eQTL | 7.35e-01 | 0.0627 | 0.185 | 0.067 | PB | L2 |
| ENSG00000131236 | CAP1 | 78765 | sc-eQTL | 3.69e-01 | 0.167 | 0.185 | 0.067 | PB | L2 |
| ENSG00000131238 | PPT1 | 21271 | sc-eQTL | 5.36e-01 | 0.126 | 0.203 | 0.067 | PB | L2 |
| ENSG00000164002 | EXO5 | -389743 | sc-eQTL | 3.47e-01 | 0.192 | 0.203 | 0.067 | PB | L2 |
| ENSG00000171793 | CTPS1 | -860690 | sc-eQTL | 2.50e-02 | -0.475 | 0.209 | 0.067 | PB | L2 |
| ENSG00000179862 | CITED4 | -743365 | sc-eQTL | 8.04e-01 | -0.047 | 0.189 | 0.067 | PB | L2 |
| ENSG00000187815 | ZFP69 | -358292 | sc-eQTL | 1.34e-01 | 0.299 | 0.198 | 0.067 | PB | L2 |
| ENSG00000198754 | OXCT2 | 347650 | sc-eQTL | 4.18e-02 | 0.362 | 0.176 | 0.067 | PB | L2 |
| ENSG00000259943 | AL050341.2 | -138969 | sc-eQTL | 6.50e-01 | -0.0957 | 0.211 | 0.067 | PB | L2 |
| ENSG00000272145 | NFYC-AS1 | -573068 | sc-eQTL | 5.54e-01 | -0.118 | 0.198 | 0.067 | PB | L2 |
|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|
|
Gene ID
|
Gene Symbol |
TSS Distance
|
Category |
P-value |
Effect Size
|
Effect Size (se)
|
PIP (SuSiE)
|
PIP (FINEMAP)
|
MAF
|
|---|---|---|---|---|---|---|---|---|---|
| ENSG00000066136 | NFYC | -572691 | eQTL | 0.0459 | -0.0419 | 0.0209 | 0.0 | 0.0 | 0.0481 |
| ENSG00000116983 | HPCAL4 | 427513 | eQTL | 0.0327 | -0.0729 | 0.0341 | 0.0 | 0.0 | 0.0481 |
| ENSG00000117000 | RLF | -42389 | eQTL | 3.09e-14 | 0.2 | 0.0259 | 0.00257 | 0.00252 | 0.0481 |
| ENSG00000117013 | KCNQ4 | -664789 | eQTL | 5.29e-03 | -0.227 | 0.0811 | 0.0 | 0.0 | 0.0481 |
| ENSG00000131238 | PPT1 | 21271 | eQTL | 1.88e-27 | 0.707 | 0.0631 | 0.0 | 0.0 | 0.0481 |
| ENSG00000164002 | EXO5 | -389743 | eQTL | 1.61e-02 | -0.119 | 0.0494 | 0.0 | 0.0 | 0.0481 |
| ENSG00000168389 | MFSD2A | 163886 | eQTL | 0.0318 | -0.0864 | 0.0402 | 0.0 | 0.0 | 0.0481 |
| ENSG00000259943 | AL050341.2 | -138969 | eQTL | 6.23e-08 | -0.245 | 0.045 | 0.0 | 0.0 | 0.0481 |
|
Gene ID
|
Gene Symbol |
TSS Distance
|
Whole Blood |
Muscle Skeletal |
Liver |
Brain Cerebellum |
Prostate |
Spleen |
Skin Sun Exposed Lower leg |
Artery Coronary |
Esophagus Muscularis |
Esophagus Gastroesophageal Junction |
Artery Tibial |
Heart Atrial Appendage |
Nerve Tibial |
Heart Left Ventricle |
Adrenal Gland |
Adipose Visceral Omentum |
Pancreas |
Lung |
Pituitary |
Brain Nucleus accumbens basal ganglia |
Colon Transverse |
Adipose Subcutaneous |
Esophagus Mucosa |
Brain Cortex |
Thyroid |
Stomach |
Breast Mammary Tissue |
Colon Sigmoid |
Skin Not Sun Exposed Suprapubic |
Testis |
Artery Aorta |
Brain Amygdala |
Brain Anterior cingulate cortex BA24 |
Brain Caudate basal ganglia |
Brain Cerebellar Hemisphere |
Brain Frontal Cortex BA9 |
Brain Hippocampus |
Brain Hypothalamus |
Brain Putamen basal ganglia |
Brain Spinal cord cervical c-1 |
Brain Substantia nigra |
Cells Cultured fibroblasts |
Cells EBV-transformed lymphocytes |
Kidney Cortex |
Minor Salivary Gland |
Ovary |
Small Intestine Terminal Ileum |
Uterus |
Vagina |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ENSG00000084073 | \N | -139238 | 4.32e-06 | 4.16e-06 | 8.24e-07 | 1.82e-06 | 1.35e-06 | 1.09e-06 | 2.91e-06 | 9.94e-07 | 3.65e-06 | 1.98e-06 | 4.34e-06 | 2.89e-06 | 6.47e-06 | 1.47e-06 | 1.4e-06 | 2.66e-06 | 1.83e-06 | 2.87e-06 | 1.39e-06 | 9.64e-07 | 2.62e-06 | 4.13e-06 | 3.53e-06 | 1.63e-06 | 4.75e-06 | 1.37e-06 | 2.41e-06 | 1.82e-06 | 4.2e-06 | 3.39e-06 | 1.89e-06 | 5.76e-07 | 6.32e-07 | 1.85e-06 | 1.95e-06 | 9.43e-07 | 9.52e-07 | 4.76e-07 | 1.07e-06 | 3.57e-07 | 5.18e-07 | 4.49e-06 | 3.97e-07 | 1.83e-07 | 4.86e-07 | 4.64e-07 | 8.55e-07 | 4.25e-07 | 3.6e-07 |
| ENSG00000117000 | RLF | -42389 | 1.08e-05 | 1.19e-05 | 2.57e-06 | 6.97e-06 | 2.41e-06 | 5.69e-06 | 1.41e-05 | 2.41e-06 | 1.12e-05 | 6.01e-06 | 1.5e-05 | 6.43e-06 | 2e-05 | 4.08e-06 | 3.75e-06 | 7.34e-06 | 5.99e-06 | 9.83e-06 | 3.54e-06 | 3.59e-06 | 6.67e-06 | 1.18e-05 | 1.07e-05 | 4.21e-06 | 1.83e-05 | 4.47e-06 | 7.14e-06 | 5.29e-06 | 1.39e-05 | 1.14e-05 | 7.54e-06 | 1.06e-06 | 1.46e-06 | 3.85e-06 | 5.42e-06 | 2.9e-06 | 1.78e-06 | 2.26e-06 | 2.2e-06 | 1.69e-06 | 1.46e-06 | 1.4e-05 | 1.64e-06 | 2.85e-07 | 1.41e-06 | 2.28e-06 | 2.02e-06 | 8.57e-07 | 8.61e-07 |
| ENSG00000117016 | \N | -546684 | 5.85e-07 | 3.12e-07 | 8.99e-08 | 2.66e-07 | 1.07e-07 | 1.5e-07 | 3.94e-07 | 9.07e-08 | 2.76e-07 | 1.7e-07 | 3.66e-07 | 2.33e-07 | 4.54e-07 | 9.15e-08 | 1.27e-07 | 1.61e-07 | 1.35e-07 | 3.02e-07 | 1.51e-07 | 1.08e-07 | 1.61e-07 | 2.51e-07 | 2.48e-07 | 1.04e-07 | 4.27e-07 | 2.29e-07 | 1.97e-07 | 1.97e-07 | 2.31e-07 | 2.52e-07 | 1.88e-07 | 7.59e-08 | 5.48e-08 | 1.24e-07 | 1.69e-07 | 6.83e-08 | 9.52e-08 | 6.67e-08 | 5.89e-08 | 5.32e-08 | 7.16e-08 | 2.74e-07 | 1.96e-08 | 1.74e-08 | 1.1e-07 | 1.3e-08 | 9.46e-08 | 3.09e-09 | 5.54e-08 |
| ENSG00000131238 | PPT1 | 21271 | 1.63e-05 | 1.93e-05 | 4.32e-06 | 1.17e-05 | 3.83e-06 | 1e-05 | 2.59e-05 | 3.72e-06 | 1.88e-05 | 1.02e-05 | 2.42e-05 | 9.35e-06 | 3.51e-05 | 7.85e-06 | 5.38e-06 | 1.14e-05 | 1e-05 | 1.74e-05 | 6.56e-06 | 5.4e-06 | 1.01e-05 | 2.06e-05 | 1.93e-05 | 7.18e-06 | 2.99e-05 | 5.98e-06 | 8.66e-06 | 9e-06 | 2.23e-05 | 1.99e-05 | 1.29e-05 | 1.65e-06 | 2.31e-06 | 6.43e-06 | 8.6e-06 | 4.54e-06 | 2.78e-06 | 2.96e-06 | 3.81e-06 | 3.11e-06 | 1.76e-06 | 2.33e-05 | 2.7e-06 | 4.21e-07 | 2.12e-06 | 3e-06 | 3.46e-06 | 1.49e-06 | 1.56e-06 |
| ENSG00000259943 | AL050341.2 | -138969 | 4.32e-06 | 4.09e-06 | 7.85e-07 | 1.82e-06 | 1.33e-06 | 1.09e-06 | 2.91e-06 | 1.03e-06 | 3.73e-06 | 2.02e-06 | 4.22e-06 | 2.87e-06 | 6.47e-06 | 1.47e-06 | 1.36e-06 | 2.66e-06 | 1.83e-06 | 2.89e-06 | 1.41e-06 | 9.64e-07 | 2.62e-06 | 4.13e-06 | 3.53e-06 | 1.65e-06 | 4.77e-06 | 1.37e-06 | 2.45e-06 | 1.82e-06 | 4.2e-06 | 3.39e-06 | 1.89e-06 | 5.76e-07 | 6.12e-07 | 1.87e-06 | 1.95e-06 | 9.43e-07 | 9.52e-07 | 5.11e-07 | 1.1e-06 | 3.57e-07 | 5.44e-07 | 4.49e-06 | 3.97e-07 | 1.82e-07 | 4.86e-07 | 4.64e-07 | 8.71e-07 | 4.25e-07 | 3.6e-07 |
| ENSG00000261798 | \N | 330022 | 1.25e-06 | 9.37e-07 | 3.08e-07 | 4.72e-07 | 2.98e-07 | 4.43e-07 | 1.09e-06 | 3.52e-07 | 1.15e-06 | 3.78e-07 | 1.35e-06 | 6.06e-07 | 1.65e-06 | 2.61e-07 | 4.42e-07 | 7.17e-07 | 8.28e-07 | 5.69e-07 | 5.83e-07 | 6.96e-07 | 4.43e-07 | 1.11e-06 | 7.95e-07 | 5.75e-07 | 1.92e-06 | 3.71e-07 | 7.06e-07 | 7.2e-07 | 1.04e-06 | 1.06e-06 | 5.3e-07 | 1.55e-07 | 2.19e-07 | 4.83e-07 | 4.25e-07 | 4.47e-07 | 4.54e-07 | 1.46e-07 | 2.18e-07 | 2.5e-07 | 2.59e-07 | 1.3e-06 | 5.58e-08 | 4.11e-08 | 1.52e-07 | 9.85e-08 | 2.38e-07 | 8.73e-08 | 1.23e-07 |