Genes within 1Mb (chr1:39925330:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000043514 TRIT1 41819 eQTL 2.71e-03 0.118 0.0392 0.0 0.0 0.0608
ENSG00000084072 PPIE 233148 eQTL 1.00e-01 0.082 0.0498 0.00103 0.0 0.0608
ENSG00000084073 ZMPSTE24 -332906 eQTL 3.18e-02 0.049 0.0228 0.0 0.0 0.0608
ENSG00000117013 KCNQ4 -858457 eQTL 1.30e-02 0.178 0.0716 0.00119 0.0 0.0608
ENSG00000131238 PPT1 -172397 eQTL 4.51e-02 0.119 0.0591 0.0 0.0 0.0608
ENSG00000164002 EXO5 -583411 eQTL 1.25e-02 0.109 0.0436 0.0 0.0 0.0608
ENSG00000168653 NDUFS5 899012 eQTL 1.53e-03 0.12 0.0378 0.0 0.0 0.0608
ENSG00000187815 ZFP69 -551960 eQTL 2.21e-02 0.0979 0.0427 0.0 0.0 0.0608


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000043514 TRIT1 41819 1.25e-05 1.29e-05 2.27e-06 7.6e-06 2.32e-06 5.29e-06 1.41e-05 2.14e-06 1.07e-05 6.14e-06 1.59e-05 6.53e-06 1.86e-05 4.18e-06 4.05e-06 7.09e-06 6.37e-06 9.74e-06 2.97e-06 3.12e-06 6.38e-06 1.14e-05 1.07e-05 3.58e-06 1.97e-05 4.31e-06 7.06e-06 4.8e-06 1.29e-05 9.8e-06 7.65e-06 9.91e-07 1.17e-06 3.58e-06 5.86e-06 2.83e-06 1.83e-06 2.04e-06 2.17e-06 9.98e-07 9.75e-07 1.57e-05 1.57e-06 1.76e-07 7.93e-07 1.96e-06 1.82e-06 7.04e-07 5.01e-07
ENSG00000116990 \N 23074 1.72e-05 2.05e-05 3.15e-06 1.13e-05 3.08e-06 7.78e-06 2.37e-05 3.33e-06 1.73e-05 8.91e-06 2.29e-05 8.78e-06 3.03e-05 7.35e-06 5.24e-06 1.03e-05 9.14e-06 1.51e-05 4.64e-06 4.28e-06 8.31e-06 1.78e-05 1.81e-05 5.33e-06 2.82e-05 5.44e-06 8.03e-06 7.72e-06 1.81e-05 1.55e-05 1.24e-05 1.27e-06 1.55e-06 4.8e-06 8.27e-06 4.06e-06 1.79e-06 2.73e-06 3.16e-06 2.11e-06 1.29e-06 2.33e-05 2.54e-06 2.5e-07 1.43e-06 2.68e-06 3.02e-06 1.23e-06 9.71e-07
ENSG00000168389 \N -29782 1.48e-05 1.68e-05 2.67e-06 9.47e-06 2.55e-06 6.44e-06 2.03e-05 3.02e-06 1.5e-05 7.64e-06 1.97e-05 7.67e-06 2.53e-05 5.67e-06 5.07e-06 9.16e-06 8.14e-06 1.22e-05 3.87e-06 3.86e-06 7.08e-06 1.42e-05 1.52e-05 4.81e-06 2.49e-05 5.12e-06 7.76e-06 6.17e-06 1.59e-05 1.3e-05 1.05e-05 9.94e-07 1.44e-06 4.05e-06 7.03e-06 3.74e-06 1.74e-06 2.43e-06 2.61e-06 1.69e-06 1.12e-06 1.96e-05 2.24e-06 1.96e-07 1.04e-06 2.52e-06 2.51e-06 8.55e-07 6.37e-07
ENSG00000187801 \N -524777 5.74e-07 3.35e-07 8.02e-08 3.19e-07 1.09e-07 1.25e-07 3.42e-07 7.52e-08 2.56e-07 1.6e-07 3.66e-07 2.11e-07 4.54e-07 9.18e-08 1.24e-07 1.14e-07 8.53e-08 2.9e-07 9.69e-08 7.84e-08 1.52e-07 2.3e-07 2.11e-07 4.91e-08 3.7e-07 1.9e-07 1.74e-07 1.67e-07 1.54e-07 2.02e-07 2.11e-07 7.71e-08 4.98e-08 1.03e-07 2.15e-07 5.32e-08 6.77e-08 5.8e-08 4.99e-08 8.61e-08 4.07e-08 2.8e-07 3.14e-08 1.72e-08 8.06e-08 1.35e-08 9.07e-08 2.89e-09 4.82e-08