Genes within 1Mb (chr1:39476625:C:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000043514 TRIT1 -406886 eQTL 9.11e-03 -0.0667 0.0255 0.0 0.0 0.155
ENSG00000084072 PPIE -215557 eQTL 2.73e-02 -0.0715 0.0323 0.0 0.0 0.155
ENSG00000090621 PABPC4 -100165 eQTL 7.93e-16 -0.104 0.0127 0.0 0.0 0.155
ENSG00000116983 HPCAL4 -214860 eQTL 7.38e-03 -0.0524 0.0195 0.0 0.0 0.155
ENSG00000127603 MACF1 395309 eQTL 1.26e-07 0.113 0.0212 0.0 0.0 0.155
ENSG00000183682 BMP8A -15011 eQTL 2.14e-09 0.205 0.0339 0.0 0.0 0.155
ENSG00000228477 AL663070.1 -486055 eQTL 1.44e-02 0.0832 0.0339 0.00149 0.0 0.155
ENSG00000237624 OXCT2P1 -38331 eQTL 4.08e-09 0.313 0.0526 0.00894 0.0132 0.155
ENSG00000243970 PPIEL -83046 eQTL 2.24e-13 0.251 0.0337 0.0 0.0 0.155


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000084072 PPIE -215557 4.11e-06 4.35e-06 6.94e-07 2.02e-06 8.14e-07 1.03e-06 2.43e-06 9.1e-07 2.76e-06 1.66e-06 3.71e-06 2.89e-06 5.6e-06 1.49e-06 1.26e-06 2.01e-06 1.82e-06 2.12e-06 1.54e-06 1.22e-06 1.81e-06 3.79e-06 3.25e-06 1.4e-06 4.55e-06 1.28e-06 1.82e-06 1.71e-06 3.17e-06 2.86e-06 2.02e-06 4.72e-07 5.68e-07 1.39e-06 1.73e-06 9.72e-07 9.08e-07 4.66e-07 1.31e-06 3.46e-07 2.11e-07 4.49e-06 3.78e-07 1.9e-07 3.06e-07 3.7e-07 8.3e-07 2.41e-07 1.74e-07
ENSG00000090621 PABPC4 -100165 8.64e-06 1.14e-05 1.35e-06 6.13e-06 2.22e-06 4.24e-06 1.03e-05 1.91e-06 9.26e-06 5.14e-06 1.24e-05 5.61e-06 1.48e-05 3.63e-06 2.82e-06 6.52e-06 4.74e-06 6.63e-06 2.58e-06 2.85e-06 5.18e-06 9.58e-06 7.37e-06 2.82e-06 1.37e-05 3.49e-06 4.86e-06 3.74e-06 8.8e-06 7.8e-06 5.58e-06 8.89e-07 1.27e-06 2.89e-06 4.59e-06 2.07e-06 1.71e-06 1.94e-06 2e-06 1.01e-06 8.59e-07 1.3e-05 1.45e-06 1.58e-07 6.74e-07 1.62e-06 1.4e-06 7.76e-07 4.77e-07
ENSG00000116983 HPCAL4 -214860 4.11e-06 4.33e-06 6.95e-07 1.95e-06 7.98e-07 1.01e-06 2.41e-06 8.93e-07 2.73e-06 1.7e-06 3.7e-06 2.87e-06 5.72e-06 1.45e-06 1.22e-06 2.06e-06 1.8e-06 2.12e-06 1.53e-06 1.2e-06 1.81e-06 3.87e-06 3.28e-06 1.44e-06 4.61e-06 1.28e-06 1.9e-06 1.68e-06 3.2e-06 2.91e-06 1.94e-06 4.55e-07 5.88e-07 1.43e-06 1.8e-06 9.73e-07 9.41e-07 4.67e-07 1.31e-06 3.65e-07 2.26e-07 4.47e-06 3.96e-07 1.9e-07 3.06e-07 3.54e-07 8.3e-07 2.41e-07 1.74e-07
ENSG00000127603 MACF1 395309 1.31e-06 9.82e-07 3.45e-07 5.88e-07 2.79e-07 4.92e-07 1.21e-06 3.28e-07 1.14e-06 4.15e-07 1.35e-06 6.58e-07 1.83e-06 2.55e-07 5.58e-07 7e-07 7.74e-07 5.69e-07 6.18e-07 6.68e-07 4.19e-07 1.22e-06 7.79e-07 5.53e-07 1.95e-06 3.06e-07 7.27e-07 6e-07 9.73e-07 1.22e-06 5.72e-07 1.72e-07 2.43e-07 4.57e-07 4.22e-07 3.95e-07 4.79e-07 1.25e-07 2.78e-07 1.04e-07 3.03e-07 1.54e-06 8.26e-08 1.95e-08 1.64e-07 1.14e-07 2.09e-07 5.39e-08 8.61e-08
ENSG00000131236 \N -563608 8.35e-07 5.18e-07 1.12e-07 3.58e-07 9.33e-08 2.24e-07 5.28e-07 9.91e-08 3.32e-07 2.28e-07 5.29e-07 4.21e-07 6.47e-07 1.41e-07 2.35e-07 1.96e-07 2.53e-07 3.58e-07 2.12e-07 1.41e-07 1.87e-07 3.76e-07 3.02e-07 1.21e-07 6.65e-07 2.46e-07 2.52e-07 2.18e-07 2.84e-07 4.9e-07 2.83e-07 6.92e-08 4.28e-08 1.23e-07 2.85e-07 6.94e-08 1.11e-07 8.21e-08 4.55e-08 3.12e-08 8.48e-08 4.42e-07 4.18e-08 1.77e-08 1.1e-07 1.27e-08 8.01e-08 2.38e-08 4.71e-08
ENSG00000168653 \N 450307 1.26e-06 9e-07 2.72e-07 3.25e-07 1.81e-07 4.12e-07 7.53e-07 2.26e-07 8.32e-07 2.81e-07 1.09e-06 5.6e-07 1.33e-06 2.29e-07 4.55e-07 4.12e-07 7.22e-07 5.16e-07 4e-07 3.72e-07 2.54e-07 7.21e-07 4.96e-07 3.12e-07 1.53e-06 2.34e-07 5.49e-07 4.23e-07 6.62e-07 9.25e-07 4.48e-07 3.86e-08 1.31e-07 2.19e-07 3.22e-07 2.25e-07 2.96e-07 1.21e-07 1.24e-07 9.5e-09 1.79e-07 1.05e-06 7.53e-08 5.8e-09 1.91e-07 6.87e-08 1.67e-07 8.74e-08 4.96e-08
ENSG00000183682 BMP8A -15011 3.44e-05 3.46e-05 6.39e-06 1.61e-05 6.22e-06 1.51e-05 4.55e-05 5.07e-06 3.31e-05 1.66e-05 4.15e-05 1.87e-05 5.21e-05 1.52e-05 7.62e-06 2.04e-05 1.89e-05 2.66e-05 8.18e-06 7.31e-06 1.65e-05 3.53e-05 3.3e-05 9.54e-06 4.78e-05 8.39e-06 1.56e-05 1.36e-05 3.36e-05 2.64e-05 2.2e-05 1.63e-06 2.83e-06 7.58e-06 1.25e-05 5.99e-06 3.43e-06 3.25e-06 5.3e-06 3.57e-06 1.69e-06 4.03e-05 3.68e-06 3.99e-07 2.66e-06 4.51e-06 4.42e-06 1.69e-06 1.52e-06
ENSG00000213172 \N -888141 2.95e-07 1.33e-07 5.93e-08 1.89e-07 9.82e-08 8.33e-08 1.81e-07 5.66e-08 1.47e-07 6.75e-08 1.73e-07 1.23e-07 1.71e-07 7.95e-08 5.69e-08 7.23e-08 4.18e-08 1.51e-07 7.18e-08 5.07e-08 1.25e-07 1.31e-07 1.5e-07 3.17e-08 1.68e-07 1.22e-07 1.12e-07 1.01e-07 1.24e-07 1.05e-07 1.06e-07 4.23e-08 3.13e-08 8.89e-08 3.52e-08 2.99e-08 4.41e-08 8.68e-08 6.42e-08 4.24e-08 5.81e-08 1.46e-07 5.27e-08 1.23e-08 3.41e-08 1.68e-08 1.11e-07 2.07e-09 4.85e-08
ENSG00000228477 AL663070.1 -486055 1.25e-06 8.16e-07 1.76e-07 4.43e-07 1.11e-07 3.08e-07 6.54e-07 1.73e-07 6.18e-07 3.22e-07 9.92e-07 5.5e-07 1.05e-06 1.97e-07 3.86e-07 3.36e-07 5.56e-07 4.39e-07 3.06e-07 2.37e-07 2.49e-07 5.49e-07 4.2e-07 2.24e-07 1.25e-06 2.57e-07 4.37e-07 3.24e-07 4.9e-07 7.92e-07 4.08e-07 4.44e-08 5.95e-08 1.67e-07 3.7e-07 1.66e-07 1.86e-07 1.06e-07 8.52e-08 8.36e-09 1.16e-07 7.7e-07 7.23e-08 1.06e-08 1.67e-07 3.54e-08 1.18e-07 8.34e-08 6.12e-08
ENSG00000237624 OXCT2P1 -38331 1.86e-05 2.58e-05 3.99e-06 1.32e-05 3.42e-06 9.53e-06 2.77e-05 3.72e-06 2.03e-05 1.07e-05 2.82e-05 1.09e-05 3.72e-05 1e-05 5.53e-06 1.18e-05 1.2e-05 1.74e-05 5.8e-06 5.17e-06 9.65e-06 2.24e-05 2.15e-05 5.78e-06 3.26e-05 5.78e-06 9.29e-06 8.79e-06 2.12e-05 1.77e-05 1.34e-05 1.45e-06 1.89e-06 5.15e-06 9.03e-06 4.37e-06 2.29e-06 2.76e-06 3.63e-06 2.62e-06 1.59e-06 2.95e-05 2.67e-06 2.62e-07 1.9e-06 2.87e-06 3.39e-06 1.35e-06 1.1e-06
ENSG00000243970 PPIEL -83046 1.03e-05 1.28e-05 1.88e-06 7.37e-06 2.42e-06 5.12e-06 1.2e-05 2.18e-06 1.05e-05 5.8e-06 1.5e-05 6.43e-06 1.88e-05 4.15e-06 3.67e-06 6.79e-06 6.45e-06 8.09e-06 2.87e-06 2.82e-06 6.31e-06 1.09e-05 9.89e-06 3.28e-06 1.81e-05 4.34e-06 6.57e-06 4.78e-06 1.15e-05 9.09e-06 7.4e-06 1.05e-06 1.1e-06 3.29e-06 5.33e-06 2.66e-06 1.87e-06 1.93e-06 2.08e-06 1.01e-06 1.01e-06 1.59e-05 1.61e-06 1.52e-07 7.89e-07 1.71e-06 1.8e-06 7.39e-07 4.47e-07