Genes within 1Mb (chr1:38921062:G:A):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000043514 TRIT1 -962449 sc-eQTL 1.69e-01 0.275 0.199 0.05 NK_HLA L2
ENSG00000084072 PPIE -771120 sc-eQTL 2.28e-01 -0.245 0.203 0.05 NK_HLA L2
ENSG00000090621 PABPC4 -655728 sc-eQTL 2.66e-01 0.204 0.183 0.05 NK_HLA L2
ENSG00000116954 RRAGC 61290 sc-eQTL 7.35e-01 0.0716 0.211 0.05 NK_HLA L2
ENSG00000116985 BMP8B -867803 sc-eQTL 6.76e-02 -0.343 0.187 0.05 NK_HLA L2
ENSG00000127603 MACF1 -160254 sc-eQTL 8.11e-01 -0.0377 0.157 0.05 NK_HLA L2
ENSG00000168653 NDUFS5 -105256 sc-eQTL 1.10e-02 -0.524 0.204 0.05 NK_HLA L2
ENSG00000174574 AKIRIN1 -70214 sc-eQTL 7.35e-01 -0.0707 0.209 0.05 NK_HLA L2
ENSG00000183386 FHL3 915456 sc-eQTL 2.34e-02 0.348 0.152 0.05 NK_HLA L2
ENSG00000183431 SF3A3 930987 sc-eQTL 4.76e-01 -0.15 0.21 0.05 NK_HLA L2
ENSG00000183520 UTP11 911804 sc-eQTL 4.34e-02 0.426 0.21 0.05 NK_HLA L2
ENSG00000204084 INPP5B 974005 sc-eQTL 6.85e-02 0.372 0.203 0.05 NK_HLA L2
ENSG00000214114 MYCBP 47694 sc-eQTL 5.60e-01 0.121 0.208 0.05 NK_HLA L2
ENSG00000228436 AL139260.1 61150 sc-eQTL 9.13e-01 -0.0207 0.189 0.05 NK_HLA L2
ENSG00000043514 TRIT1 -962449 sc-eQTL 4.53e-01 0.188 0.25 0.052 PB L2
ENSG00000084072 PPIE -771120 sc-eQTL 9.59e-01 -0.0114 0.225 0.052 PB L2
ENSG00000090621 PABPC4 -655728 sc-eQTL 6.37e-01 -0.0643 0.136 0.052 PB L2
ENSG00000116954 RRAGC 61290 sc-eQTL 9.51e-01 -0.0148 0.238 0.052 PB L2
ENSG00000116985 BMP8B -867803 sc-eQTL 1.88e-01 -0.207 0.156 0.052 PB L2
ENSG00000127603 MACF1 -160254 sc-eQTL 4.06e-01 0.177 0.212 0.052 PB L2
ENSG00000168653 NDUFS5 -105256 sc-eQTL 5.35e-01 0.0714 0.115 0.052 PB L2
ENSG00000174574 AKIRIN1 -70214 sc-eQTL 7.95e-01 0.0606 0.232 0.052 PB L2
ENSG00000183431 SF3A3 930987 sc-eQTL 1.62e-01 0.291 0.207 0.052 PB L2
ENSG00000183520 UTP11 911804 sc-eQTL 4.16e-01 0.125 0.153 0.052 PB L2
ENSG00000185668 POU3F1 874269 sc-eQTL 4.06e-01 0.184 0.22 0.052 PB L2
ENSG00000198754 OXCT2 -850286 sc-eQTL 2.12e-01 -0.254 0.202 0.052 PB L2
ENSG00000204084 INPP5B 974005 sc-eQTL 2.62e-02 -0.548 0.243 0.052 PB L2
ENSG00000214114 MYCBP 47694 sc-eQTL 7.98e-01 0.033 0.128 0.052 PB L2
ENSG00000238063 LINC01685 446237 sc-eQTL 5.34e-01 -0.137 0.22 0.052 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000174574 AKIRIN1 -70214 eQTL 2.26e-02 0.0403 0.0177 0.0 0.0 0.0564
ENSG00000243970 PPIEL -638609 eQTL 0.0416 0.109 0.0534 0.0 0.0 0.0564


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000174574 AKIRIN1 -70214 6.3e-06 9.5e-06 9.81e-07 4.32e-06 1.9e-06 3e-06 9.67e-06 1.58e-06 6.18e-06 4.26e-06 9.35e-06 4.49e-06 1.14e-05 3.85e-06 1.54e-06 5.34e-06 3.71e-06 4.1e-06 2.18e-06 2.41e-06 3.6e-06 7.67e-06 6.17e-06 2.42e-06 1.1e-05 2.55e-06 3.96e-06 2.62e-06 7e-06 7.79e-06 4.12e-06 7.78e-07 7.03e-07 2.75e-06 3.13e-06 2.06e-06 1.38e-06 1.35e-06 1.42e-06 8.89e-07 8.54e-07 9.24e-06 9.29e-07 1.56e-07 6.85e-07 1.01e-06 9.63e-07 6.46e-07 6e-07
ENSG00000243970 PPIEL -638609 2.8e-07 1.42e-07 5.93e-08 2.31e-07 9.82e-08 8.37e-08 1.9e-07 5.82e-08 1.5e-07 7.6e-08 1.67e-07 1.15e-07 1.87e-07 8.13e-08 5.43e-08 7.89e-08 4.31e-08 1.56e-07 7.09e-08 5.75e-08 1.24e-07 1.39e-07 1.62e-07 3.4e-08 1.85e-07 1.31e-07 1.17e-07 1.1e-07 1.31e-07 1.07e-07 1.07e-07 4.93e-08 3.21e-08 9.81e-08 4.41e-08 3.24e-08 4.84e-08 7.25e-08 6.29e-08 6.31e-08 4.53e-08 1.5e-07 5.22e-08 1.08e-08 3.4e-08 1.01e-08 8.46e-08 0.0 4.91e-08