logo

Genes within 1Mb (chr1:38920693:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000043514 TRIT1 -962818 sc-eQTL 1.69e-01 0.275 0.199 0.05 NK_HLA L2
ENSG00000084072 PPIE -771489 sc-eQTL 2.28e-01 -0.245 0.203 0.05 NK_HLA L2
ENSG00000090621 PABPC4 -656097 sc-eQTL 2.66e-01 0.204 0.183 0.05 NK_HLA L2
ENSG00000116954 RRAGC 60921 sc-eQTL 7.35e-01 0.0716 0.211 0.05 NK_HLA L2
ENSG00000116985 BMP8B -868172 sc-eQTL 6.76e-02 -0.343 0.187 0.05 NK_HLA L2
ENSG00000127603 MACF1 -160623 sc-eQTL 8.11e-01 -0.0377 0.157 0.05 NK_HLA L2
ENSG00000168653 NDUFS5 -105625 sc-eQTL 1.10e-02 -0.524 0.204 0.05 NK_HLA L2
ENSG00000174574 AKIRIN1 -70583 sc-eQTL 7.35e-01 -0.0707 0.209 0.05 NK_HLA L2
ENSG00000183386 FHL3 915087 sc-eQTL 2.34e-02 0.348 0.152 0.05 NK_HLA L2
ENSG00000183431 SF3A3 930618 sc-eQTL 4.76e-01 -0.15 0.21 0.05 NK_HLA L2
ENSG00000183520 UTP11 911435 sc-eQTL 4.34e-02 0.426 0.21 0.05 NK_HLA L2
ENSG00000204084 INPP5B 973636 sc-eQTL 6.85e-02 0.372 0.203 0.05 NK_HLA L2
ENSG00000214114 MYCBP 47325 sc-eQTL 5.60e-01 0.121 0.208 0.05 NK_HLA L2
ENSG00000228436 AL139260.1 60781 sc-eQTL 9.13e-01 -0.0207 0.189 0.05 NK_HLA L2
ENSG00000043514 TRIT1 -962818 sc-eQTL 4.53e-01 0.188 0.25 0.052 PB L2
ENSG00000084072 PPIE -771489 sc-eQTL 9.59e-01 -0.0114 0.225 0.052 PB L2
ENSG00000090621 PABPC4 -656097 sc-eQTL 6.37e-01 -0.0643 0.136 0.052 PB L2
ENSG00000116954 RRAGC 60921 sc-eQTL 9.51e-01 -0.0148 0.238 0.052 PB L2
ENSG00000116985 BMP8B -868172 sc-eQTL 1.88e-01 -0.207 0.156 0.052 PB L2
ENSG00000127603 MACF1 -160623 sc-eQTL 4.06e-01 0.177 0.212 0.052 PB L2
ENSG00000168653 NDUFS5 -105625 sc-eQTL 5.35e-01 0.0714 0.115 0.052 PB L2
ENSG00000174574 AKIRIN1 -70583 sc-eQTL 7.95e-01 0.0606 0.232 0.052 PB L2
ENSG00000183431 SF3A3 930618 sc-eQTL 1.62e-01 0.291 0.207 0.052 PB L2
ENSG00000183520 UTP11 911435 sc-eQTL 4.16e-01 0.125 0.153 0.052 PB L2
ENSG00000185668 POU3F1 873900 sc-eQTL 4.06e-01 0.184 0.22 0.052 PB L2
ENSG00000198754 OXCT2 -850655 sc-eQTL 2.12e-01 -0.254 0.202 0.052 PB L2
ENSG00000204084 INPP5B 973636 sc-eQTL 2.62e-02 -0.548 0.243 0.052 PB L2
ENSG00000214114 MYCBP 47325 sc-eQTL 7.98e-01 0.033 0.128 0.052 PB L2
ENSG00000238063 LINC01685 445868 sc-eQTL 5.34e-01 -0.137 0.22 0.052 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000174574 \N -70583 7.81e-06 9.46e-06 1.32e-06 4.6e-06 2.52e-06 3.88e-06 9.87e-06 2.08e-06 7.89e-06 4.7e-06 1.06e-05 4.97e-06 1.29e-05 3.86e-06 2.52e-06 6.52e-06 3.81e-06 6.71e-06 2.61e-06 2.85e-06 5.1e-06 8.06e-06 7.07e-06 3.27e-06 1.28e-05 3.77e-06 4.85e-06 3.75e-06 9.48e-06 8.46e-06 4.53e-06 1.09e-06 1.2e-06 3.52e-06 3.88e-06 2.81e-06 1.84e-06 1.95e-06 2.15e-06 1.26e-06 1.44e-06 1.01e-05 1.35e-06 2.62e-07 8.86e-07 1.81e-06 1.6e-06 7.28e-07 4.51e-07
ENSG00000243970 \N -638978 4.89e-07 2.5e-07 8.51e-08 2.53e-07 9.82e-08 1.25e-07 3.57e-07 8.86e-08 2.66e-07 1.65e-07 3.32e-07 2.22e-07 4.11e-07 8.85e-08 1.26e-07 1.63e-07 8.74e-08 2.96e-07 1.36e-07 8.1e-08 1.65e-07 2.45e-07 2.26e-07 9.63e-08 4.11e-07 2.07e-07 1.83e-07 1.85e-07 2.11e-07 2.52e-07 1.78e-07 6.04e-08 5.75e-08 1.24e-07 1.54e-07 5.41e-08 6.67e-08 6e-08 5.4e-08 5.96e-08 5.43e-08 2.65e-07 3.09e-08 1.99e-08 9.64e-08 8.94e-09 1.04e-07 0.0 5.61e-08