Genes within 1Mb (chr1:38751973:C:A):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000084072 PPIE -940209 sc-eQTL 2.74e-01 -0.24 0.219 0.052 gdT L2
ENSG00000090621 PABPC4 -824817 sc-eQTL 1.43e-01 -0.283 0.192 0.052 gdT L2
ENSG00000116954 RRAGC -107799 sc-eQTL 2.91e-01 -0.241 0.227 0.052 gdT L2
ENSG00000127603 MACF1 -329343 sc-eQTL 6.98e-01 -0.0713 0.184 0.052 gdT L2
ENSG00000168653 NDUFS5 -274345 sc-eQTL 4.12e-01 0.164 0.2 0.052 gdT L2
ENSG00000174574 AKIRIN1 -239303 sc-eQTL 8.63e-01 -0.0336 0.195 0.052 gdT L2
ENSG00000183386 FHL3 746367 sc-eQTL 3.23e-01 0.202 0.204 0.052 gdT L2
ENSG00000183431 SF3A3 761898 sc-eQTL 4.79e-01 -0.16 0.226 0.052 gdT L2
ENSG00000183520 UTP11 742715 sc-eQTL 2.81e-01 -0.255 0.235 0.052 gdT L2
ENSG00000185090 MANEAL 958171 sc-eQTL 4.65e-02 0.373 0.186 0.052 gdT L2
ENSG00000185668 POU3F1 705180 sc-eQTL 2.10e-01 -0.246 0.195 0.052 gdT L2
ENSG00000188786 MTF1 892381 sc-eQTL 4.21e-01 0.182 0.226 0.052 gdT L2
ENSG00000196449 YRDC 943765 sc-eQTL 5.69e-01 -0.11 0.193 0.052 gdT L2
ENSG00000197982 C1orf122 944994 sc-eQTL 2.55e-01 -0.228 0.199 0.052 gdT L2
ENSG00000204084 INPP5B 804916 sc-eQTL 6.78e-01 0.0888 0.213 0.052 gdT L2
ENSG00000214114 MYCBP -121395 sc-eQTL 1.64e-01 0.267 0.191 0.052 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000090621 PABPC4 -824817 eQTL 0.0218 -0.0588 0.0256 0.0 0.0 0.0466


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116954 \N -107799 4.74e-06 4.86e-06 7.09e-07 3.18e-06 1.63e-06 1.76e-06 5.05e-06 1.16e-06 5.1e-06 2.48e-06 5.38e-06 3.27e-06 7.69e-06 2.13e-06 1.33e-06 3.79e-06 1.87e-06 3.83e-06 1.45e-06 1.41e-06 2.88e-06 4.86e-06 4.58e-06 1.94e-06 6.86e-06 2.01e-06 2.39e-06 1.77e-06 4.46e-06 5.02e-06 2.85e-06 4.46e-07 7.54e-07 2.02e-06 2.05e-06 1.26e-06 1.08e-06 4.18e-07 9.49e-07 6.22e-07 7.73e-07 5.67e-06 3.47e-07 1.52e-07 7.7e-07 1.19e-06 1.09e-06 7.35e-07 5.44e-07
ENSG00000183520 \N 742715 3.02e-07 1.5e-07 6.41e-08 2.09e-07 1.02e-07 8.37e-08 1.99e-07 5.78e-08 1.66e-07 9.35e-08 1.63e-07 1.31e-07 2.05e-07 8.13e-08 5.69e-08 8.71e-08 4.45e-08 1.72e-07 7.39e-08 5.75e-08 1.18e-07 1.47e-07 1.58e-07 3.59e-08 1.98e-07 1.31e-07 1.2e-07 1.1e-07 1.31e-07 1.29e-07 1.09e-07 4.61e-08 3.56e-08 9.8e-08 3.71e-08 3.11e-08 4.28e-08 8.25e-08 6.35e-08 5.45e-08 6.14e-08 1.59e-07 3.99e-08 1.2e-08 3.4e-08 1.19e-08 8.67e-08 2.05e-09 4.67e-08
ENSG00000188786 \N 892381 2.67e-07 1.27e-07 5.49e-08 1.82e-07 1.01e-07 9.48e-08 1.6e-07 5.66e-08 1.45e-07 6.08e-08 1.52e-07 1.05e-07 1.53e-07 7.13e-08 6.25e-08 7.5e-08 4.12e-08 1.4e-07 6.32e-08 4.8e-08 1.26e-07 1.26e-07 1.44e-07 2.87e-08 1.55e-07 1.26e-07 1.13e-07 9.74e-08 1.23e-07 9.88e-08 1.02e-07 3.59e-08 3.73e-08 8.56e-08 5.64e-08 3.05e-08 5.59e-08 8.72e-08 6.43e-08 4.55e-08 5.24e-08 1.46e-07 5.24e-08 1.32e-08 3.4e-08 1.87e-08 1.21e-07 1.89e-09 4.8e-08