Genes within 1Mb (chr1:38484308:C:T):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116922 C1orf109 792059 sc-eQTL 7.66e-01 -0.0528 0.177 0.051 B_Activated L2
ENSG00000116954 RRAGC -375464 sc-eQTL 5.98e-01 0.107 0.203 0.051 B_Activated L2
ENSG00000127603 MACF1 -597008 sc-eQTL 1.46e-01 -0.257 0.176 0.051 B_Activated L2
ENSG00000134697 GNL2 888371 sc-eQTL 2.43e-01 0.268 0.229 0.051 B_Activated L2
ENSG00000163875 MEAF6 969534 sc-eQTL 7.53e-02 -0.356 0.199 0.051 B_Activated L2
ENSG00000163877 SNIP1 930015 sc-eQTL 2.75e-01 -0.222 0.203 0.051 B_Activated L2
ENSG00000168653 NDUFS5 -542010 sc-eQTL 6.82e-01 0.0925 0.226 0.051 B_Activated L2
ENSG00000174574 AKIRIN1 -506968 sc-eQTL 6.13e-01 -0.109 0.215 0.051 B_Activated L2
ENSG00000183431 SF3A3 494233 sc-eQTL 7.33e-01 -0.0724 0.212 0.051 B_Activated L2
ENSG00000183520 UTP11 475050 sc-eQTL 2.86e-01 0.206 0.192 0.051 B_Activated L2
ENSG00000185090 MANEAL 690506 sc-eQTL 1.84e-01 0.232 0.174 0.051 B_Activated L2
ENSG00000185668 POU3F1 437515 sc-eQTL 8.70e-02 0.296 0.172 0.051 B_Activated L2
ENSG00000188786 MTF1 624716 sc-eQTL 1.76e-01 -0.295 0.217 0.051 B_Activated L2
ENSG00000196449 YRDC 676100 sc-eQTL 4.15e-01 -0.163 0.2 0.051 B_Activated L2
ENSG00000197982 C1orf122 677329 sc-eQTL 3.75e-01 -0.186 0.209 0.051 B_Activated L2
ENSG00000204084 INPP5B 537251 sc-eQTL 2.60e-03 0.635 0.208 0.051 B_Activated L2
ENSG00000214114 MYCBP -389060 sc-eQTL 9.10e-01 -0.0227 0.2 0.051 B_Activated L2
ENSG00000238063 LINC01685 9483 sc-eQTL 2.71e-01 0.148 0.134 0.051 B_Activated L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000197982 C1orf122 677329 eQTL 1.64e-02 0.165 0.0688 0.00206 0.0 0.0177


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000163877 \N 930015 2.64e-07 1.01e-07 3.69e-08 1.76e-07 9.65e-08 9.32e-08 1.42e-07 5.49e-08 1.42e-07 4.38e-08 1.6e-07 7.88e-08 1.26e-07 6.21e-08 5.44e-08 7.89e-08 4.94e-08 1.1e-07 5.19e-08 3.88e-08 1.04e-07 1.3e-07 1.3e-07 4.54e-08 1.31e-07 1.15e-07 1.1e-07 8.7e-08 9.88e-08 1.09e-07 9.58e-08 4.1e-08 2.91e-08 8.25e-08 9.14e-08 3.87e-08 4.78e-08 9.25e-08 8.3e-08 3.12e-08 3.43e-08 1.37e-07 4.14e-08 2.4e-08 5.87e-08 1.74e-08 1.25e-07 4.2e-09 4.79e-08
ENSG00000214114 \N -389060 9.14e-07 3.11e-07 7.87e-08 2.53e-07 1.09e-07 1.32e-07 4.05e-07 8.17e-08 2.66e-07 1.65e-07 3.97e-07 2.8e-07 4.88e-07 9.48e-08 9.12e-08 1.76e-07 1.01e-07 3.12e-07 1.27e-07 7.84e-08 1.68e-07 2.7e-07 2.56e-07 1.03e-07 4.46e-07 2.2e-07 1.74e-07 1.85e-07 2.11e-07 2.97e-07 1.93e-07 8.37e-08 5.41e-08 1.03e-07 8.75e-08 6.52e-08 6.67e-08 5.92e-08 4.83e-08 7.17e-08 4.89e-08 3.85e-07 4.18e-08 1.86e-08 1.45e-07 8.07e-09 9.25e-08 0.0 5.71e-08