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Genes within 1Mb (chr1:38216116:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116922 C1orf109 523867 sc-eQTL 7.47e-01 0.0796 0.246 0.052 PB L2
ENSG00000116954 RRAGC -643656 sc-eQTL 7.50e-01 0.0784 0.245 0.052 PB L2
ENSG00000127603 MACF1 -865200 sc-eQTL 8.20e-01 -0.05 0.22 0.052 PB L2
ENSG00000134697 GNL2 620179 sc-eQTL 8.51e-01 0.0429 0.228 0.052 PB L2
ENSG00000163874 ZC3H12A 741536 sc-eQTL 8.90e-01 0.0293 0.211 0.052 PB L2
ENSG00000163875 MEAF6 701342 sc-eQTL 5.68e-02 0.422 0.219 0.052 PB L2
ENSG00000163877 SNIP1 661823 sc-eQTL 6.73e-01 -0.0969 0.229 0.052 PB L2
ENSG00000168653 NDUFS5 -810202 sc-eQTL 2.31e-01 0.142 0.118 0.052 PB L2
ENSG00000174574 AKIRIN1 -775160 sc-eQTL 2.55e-01 -0.273 0.239 0.052 PB L2
ENSG00000183431 SF3A3 226041 sc-eQTL 9.32e-02 -0.36 0.213 0.052 PB L2
ENSG00000183520 UTP11 206858 sc-eQTL 8.77e-01 -0.0246 0.158 0.052 PB L2
ENSG00000185090 MANEAL 422314 sc-eQTL 4.26e-01 0.191 0.239 0.052 PB L2
ENSG00000185668 POU3F1 169323 sc-eQTL 9.66e-01 -0.00966 0.228 0.052 PB L2
ENSG00000188786 MTF1 356524 sc-eQTL 7.77e-01 -0.0691 0.244 0.052 PB L2
ENSG00000196449 YRDC 407908 sc-eQTL 9.48e-01 0.0165 0.254 0.052 PB L2
ENSG00000197982 C1orf122 409137 sc-eQTL 7.09e-01 -0.0602 0.161 0.052 PB L2
ENSG00000204084 INPP5B 269059 sc-eQTL 2.68e-01 -0.284 0.255 0.052 PB L2
ENSG00000214114 MYCBP -657252 sc-eQTL 7.78e-01 0.0375 0.133 0.052 PB L2
ENSG00000238063 LINC01685 -258709 sc-eQTL 6.55e-01 0.102 0.227 0.052 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000183386 FHL3 210510 eQTL 0.00394 -0.263 0.091 0.0 0.0 0.0314
ENSG00000197982 C1orf122 409137 eQTL 3.75e-02 0.102 0.0488 0.0 0.0 0.0314
ENSG00000204084 INPP5B 269059 eQTL 0.00208 -0.292 0.0946 0.0 0.0 0.0314
ENSG00000214114 MYCBP -657252 eQTL 0.00849 -0.0925 0.0351 0.00284 0.0 0.0314
ENSG00000228436 AL139260.1 -643884 eQTL 0.034 0.247 0.116 0.00139 0.0 0.0314
ENSG00000230955 AL929472.2 355419 eQTL 0.003 -0.267 0.0897 0.0 0.0 0.0314

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000163877 \N 661823 2.95e-07 1.53e-07 6.15e-08 2.22e-07 1.05e-07 8.37e-08 2.1e-07 5.78e-08 1.66e-07 9.35e-08 1.61e-07 1.31e-07 2.13e-07 8e-08 5.69e-08 8.71e-08 4.31e-08 1.77e-07 7.29e-08 5.75e-08 1.18e-07 1.56e-07 1.64e-07 3.68e-08 2.09e-07 1.31e-07 1.2e-07 1.12e-07 1.32e-07 1.24e-07 1.14e-07 4.4e-08 3.46e-08 9.81e-08 3.36e-08 2.74e-08 3.91e-08 8.17e-08 6.49e-08 5.35e-08 5.1e-08 1.6e-07 4.7e-08 1.43e-08 3.48e-08 1.01e-08 7.83e-08 2.05e-09 4.94e-08