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Genes within 1Mb (chr1:38156692:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116922 C1orf109 464443 sc-eQTL 3.47e-01 -0.183 0.194 0.05 CD8_TEM L2
ENSG00000116954 RRAGC -703080 sc-eQTL 9.42e-01 0.015 0.206 0.05 CD8_TEM L2
ENSG00000127603 MACF1 -924624 sc-eQTL 2.02e-01 0.217 0.17 0.05 CD8_TEM L2
ENSG00000134697 GNL2 560755 sc-eQTL 2.46e-02 0.483 0.213 0.05 CD8_TEM L2
ENSG00000163874 ZC3H12A 682112 sc-eQTL 9.31e-03 0.418 0.159 0.05 CD8_TEM L2
ENSG00000163875 MEAF6 641918 sc-eQTL 7.37e-01 0.0606 0.18 0.05 CD8_TEM L2
ENSG00000163877 SNIP1 602399 sc-eQTL 7.04e-01 0.0751 0.198 0.05 CD8_TEM L2
ENSG00000168653 NDUFS5 -869626 sc-eQTL 2.62e-01 0.221 0.197 0.05 CD8_TEM L2
ENSG00000174574 AKIRIN1 -834584 sc-eQTL 6.60e-01 0.0952 0.216 0.05 CD8_TEM L2
ENSG00000183386 FHL3 151086 sc-eQTL 2.62e-01 0.24 0.213 0.05 CD8_TEM L2
ENSG00000183431 SF3A3 166617 sc-eQTL 8.53e-01 0.0413 0.223 0.05 CD8_TEM L2
ENSG00000183520 UTP11 147434 sc-eQTL 9.17e-01 -0.0222 0.212 0.05 CD8_TEM L2
ENSG00000185090 MANEAL 362890 sc-eQTL 8.17e-01 -0.0461 0.199 0.05 CD8_TEM L2
ENSG00000185668 POU3F1 109899 sc-eQTL 5.13e-01 -0.127 0.194 0.05 CD8_TEM L2
ENSG00000188786 MTF1 297100 sc-eQTL 6.06e-01 -0.111 0.214 0.05 CD8_TEM L2
ENSG00000196449 YRDC 348484 sc-eQTL 7.13e-02 0.372 0.205 0.05 CD8_TEM L2
ENSG00000197982 C1orf122 349713 sc-eQTL 8.70e-01 -0.0337 0.205 0.05 CD8_TEM L2
ENSG00000204084 INPP5B 209635 sc-eQTL 4.17e-01 -0.17 0.21 0.05 CD8_TEM L2
ENSG00000214114 MYCBP -716676 sc-eQTL 9.01e-01 0.024 0.194 0.05 CD8_TEM L2
ENSG00000233621 LINC01137 682281 sc-eQTL 3.70e-01 -0.182 0.202 0.05 CD8_TEM L2
ENSG00000116922 C1orf109 464443 sc-eQTL 7.63e-01 -0.0681 0.225 0.063 PB L2
ENSG00000116954 RRAGC -703080 sc-eQTL 3.32e-01 0.218 0.223 0.063 PB L2
ENSG00000127603 MACF1 -924624 sc-eQTL 2.19e-01 -0.247 0.2 0.063 PB L2
ENSG00000134697 GNL2 560755 sc-eQTL 7.03e-01 0.0799 0.209 0.063 PB L2
ENSG00000163874 ZC3H12A 682112 sc-eQTL 4.42e-01 0.148 0.192 0.063 PB L2
ENSG00000163875 MEAF6 641918 sc-eQTL 7.92e-02 0.356 0.201 0.063 PB L2
ENSG00000163877 SNIP1 602399 sc-eQTL 5.27e-01 -0.133 0.209 0.063 PB L2
ENSG00000168653 NDUFS5 -869626 sc-eQTL 5.79e-01 0.0603 0.108 0.063 PB L2
ENSG00000174574 AKIRIN1 -834584 sc-eQTL 4.78e-01 -0.156 0.219 0.063 PB L2
ENSG00000183431 SF3A3 166617 sc-eQTL 3.89e-02 -0.404 0.193 0.063 PB L2
ENSG00000183520 UTP11 147434 sc-eQTL 9.67e-01 0.00604 0.145 0.063 PB L2
ENSG00000185090 MANEAL 362890 sc-eQTL 1.83e-01 0.292 0.218 0.063 PB L2
ENSG00000185668 POU3F1 109899 sc-eQTL 9.13e-01 -0.0229 0.209 0.063 PB L2
ENSG00000188786 MTF1 297100 sc-eQTL 9.68e-01 -0.00898 0.223 0.063 PB L2
ENSG00000196449 YRDC 348484 sc-eQTL 1.89e-01 0.305 0.231 0.063 PB L2
ENSG00000197982 C1orf122 349713 sc-eQTL 5.83e-01 -0.0811 0.147 0.063 PB L2
ENSG00000204084 INPP5B 209635 sc-eQTL 1.64e-01 -0.326 0.232 0.063 PB L2
ENSG00000214114 MYCBP -716676 sc-eQTL 8.57e-01 0.0218 0.121 0.063 PB L2
ENSG00000238063 LINC01685 -318133 sc-eQTL 8.45e-01 0.0408 0.208 0.063 PB L2
ENSG00000116922 C1orf109 464443 sc-eQTL 9.35e-01 0.016 0.194 0.051 cDC L2
ENSG00000116954 RRAGC -703080 sc-eQTL 6.46e-01 -0.104 0.226 0.051 cDC L2
ENSG00000127603 MACF1 -924624 sc-eQTL 1.80e-02 0.423 0.177 0.051 cDC L2
ENSG00000134697 GNL2 560755 sc-eQTL 3.62e-01 0.185 0.203 0.051 cDC L2
ENSG00000163874 ZC3H12A 682112 sc-eQTL 4.26e-01 -0.137 0.172 0.051 cDC L2
ENSG00000163875 MEAF6 641918 sc-eQTL 5.07e-01 0.132 0.198 0.051 cDC L2
ENSG00000163877 SNIP1 602399 sc-eQTL 6.95e-01 -0.085 0.216 0.051 cDC L2
ENSG00000168653 NDUFS5 -869626 sc-eQTL 4.61e-01 0.117 0.158 0.051 cDC L2
ENSG00000174574 AKIRIN1 -834584 sc-eQTL 2.32e-01 0.227 0.189 0.051 cDC L2
ENSG00000183386 FHL3 151086 sc-eQTL 5.16e-01 -0.139 0.214 0.051 cDC L2
ENSG00000183431 SF3A3 166617 sc-eQTL 4.43e-01 0.16 0.209 0.051 cDC L2
ENSG00000183520 UTP11 147434 sc-eQTL 7.91e-01 -0.0613 0.231 0.051 cDC L2
ENSG00000188786 MTF1 297100 sc-eQTL 9.35e-01 0.0181 0.221 0.051 cDC L2
ENSG00000196449 YRDC 348484 sc-eQTL 4.82e-01 0.148 0.21 0.051 cDC L2
ENSG00000197982 C1orf122 349713 sc-eQTL 7.47e-01 -0.0616 0.19 0.051 cDC L2
ENSG00000204084 INPP5B 209635 sc-eQTL 4.80e-01 -0.155 0.219 0.051 cDC L2
ENSG00000214114 MYCBP -716676 sc-eQTL 7.85e-01 -0.0532 0.194 0.051 cDC L2
ENSG00000228436 AL139260.1 -703220 sc-eQTL 3.44e-01 0.197 0.208 0.051 cDC L2
ENSG00000233621 LINC01137 682281 sc-eQTL 1.13e-01 0.317 0.199 0.051 cDC L2
ENSG00000116922 C1orf109 464443 sc-eQTL 5.13e-01 -0.138 0.21 0.051 pDC L2
ENSG00000116954 RRAGC -703080 sc-eQTL 7.01e-01 0.0755 0.196 0.051 pDC L2
ENSG00000127603 MACF1 -924624 sc-eQTL 3.97e-01 0.191 0.226 0.051 pDC L2
ENSG00000134697 GNL2 560755 sc-eQTL 5.00e-01 0.157 0.233 0.051 pDC L2
ENSG00000163874 ZC3H12A 682112 sc-eQTL 5.66e-01 0.137 0.238 0.051 pDC L2
ENSG00000163875 MEAF6 641918 sc-eQTL 1.76e-01 -0.313 0.23 0.051 pDC L2
ENSG00000163877 SNIP1 602399 sc-eQTL 6.06e-01 0.134 0.258 0.051 pDC L2
ENSG00000168653 NDUFS5 -869626 sc-eQTL 5.72e-01 -0.111 0.196 0.051 pDC L2
ENSG00000174574 AKIRIN1 -834584 sc-eQTL 6.52e-03 0.571 0.207 0.051 pDC L2
ENSG00000183386 FHL3 151086 sc-eQTL 8.74e-01 0.0297 0.188 0.051 pDC L2
ENSG00000183431 SF3A3 166617 sc-eQTL 9.29e-01 -0.0214 0.239 0.051 pDC L2
ENSG00000183520 UTP11 147434 sc-eQTL 6.77e-01 0.107 0.257 0.051 pDC L2
ENSG00000188786 MTF1 297100 sc-eQTL 2.70e-01 -0.252 0.228 0.051 pDC L2
ENSG00000196449 YRDC 348484 sc-eQTL 9.72e-02 0.355 0.213 0.051 pDC L2
ENSG00000197982 C1orf122 349713 sc-eQTL 4.66e-01 -0.171 0.235 0.051 pDC L2
ENSG00000204084 INPP5B 209635 sc-eQTL 4.05e-01 -0.187 0.224 0.051 pDC L2
ENSG00000214114 MYCBP -716676 sc-eQTL 5.99e-01 0.0986 0.187 0.051 pDC L2
ENSG00000228436 AL139260.1 -703220 sc-eQTL 1.57e-02 -0.545 0.223 0.051 pDC L2
ENSG00000233621 LINC01137 682281 sc-eQTL 9.59e-01 -0.00999 0.192 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116922 C1orf109 464443 eQTL 0.046 -0.108 0.0539 0.0 0.0 0.0393
ENSG00000183386 FHL3 151086 eQTL 0.0108 -0.216 0.0845 0.0 0.0 0.0393
ENSG00000204084 INPP5B 209635 eQTL 0.000269 -0.32 0.0876 0.0 0.0 0.0393
ENSG00000214114 MYCBP -716676 eQTL 0.0033 -0.0957 0.0325 0.00593 0.001 0.0393
ENSG00000230955 AL929472.2 295995 eQTL 0.000119 -0.32 0.0829 0.0 0.0 0.0393
ENSG00000233621 LINC01137 682281 eQTL 0.0338 -0.122 0.0574 0.0 0.0 0.0393

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000183386 FHL3 151086 2.71e-06 2.57e-06 3.17e-07 1.86e-06 6.13e-07 8.4e-07 1.82e-06 6.43e-07 1.86e-06 9.91e-07 2.48e-06 1.25e-06 3.24e-06 1.38e-06 8.32e-07 1.54e-06 1.17e-06 2.31e-06 9.86e-07 1.32e-06 1.12e-06 2.87e-06 2.35e-06 1.1e-06 3.4e-06 1.21e-06 1.33e-06 1.6e-06 2.07e-06 1.98e-06 1.73e-06 3.21e-07 5.72e-07 1.24e-06 1.02e-06 9.27e-07 7.89e-07 3.7e-07 1.03e-06 3.54e-07 1.67e-07 3.36e-06 4.16e-07 1.98e-07 3.06e-07 3.37e-07 6.24e-07 2.25e-07 2.12e-07
ENSG00000230955 AL929472.2 295995 1.24e-06 9.27e-07 2.7e-07 3.44e-07 2.19e-07 3.3e-07 7.99e-07 2.84e-07 1.03e-06 3.24e-07 1.19e-06 6.07e-07 1.46e-06 2.19e-07 4.3e-07 5.69e-07 7.68e-07 5.67e-07 3.56e-07 4.48e-07 2.83e-07 7.73e-07 6.11e-07 4.79e-07 1.72e-06 2.94e-07 5.83e-07 4.98e-07 8.16e-07 9.45e-07 4.59e-07 4.91e-08 1.35e-07 3.79e-07 3.35e-07 3.36e-07 2.98e-07 1.53e-07 1.61e-07 9.67e-09 1.98e-07 1.13e-06 6.75e-08 1.28e-08 1.93e-07 7.36e-08 1.83e-07 8.57e-08 6.58e-08