Genes within 1Mb (chr1:37867347:T:C):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116922 C1orf109 175098 sc-eQTL 6.27e-01 -0.112 0.229 0.056 PB L2
ENSG00000116954 RRAGC -992425 sc-eQTL 1.47e-01 -0.331 0.226 0.056 PB L2
ENSG00000134697 GNL2 271410 sc-eQTL 3.13e-01 0.215 0.212 0.056 PB L2
ENSG00000163874 ZC3H12A 392767 sc-eQTL 7.33e-01 -0.0672 0.196 0.056 PB L2
ENSG00000163875 MEAF6 352573 sc-eQTL 1.72e-01 0.283 0.206 0.056 PB L2
ENSG00000163877 SNIP1 313054 sc-eQTL 1.36e-02 0.52 0.207 0.056 PB L2
ENSG00000183431 SF3A3 -122728 sc-eQTL 1.50e-01 0.288 0.199 0.056 PB L2
ENSG00000183520 UTP11 -141911 sc-eQTL 6.54e-01 0.0661 0.147 0.056 PB L2
ENSG00000185090 MANEAL 73545 sc-eQTL 2.25e-01 0.271 0.222 0.056 PB L2
ENSG00000185668 POU3F1 -179446 sc-eQTL 7.72e-01 -0.0618 0.212 0.056 PB L2
ENSG00000188786 MTF1 7755 sc-eQTL 4.06e-01 0.189 0.226 0.056 PB L2
ENSG00000196449 YRDC 59139 sc-eQTL 6.21e-01 -0.117 0.236 0.056 PB L2
ENSG00000197982 C1orf122 60368 sc-eQTL 2.52e-01 0.172 0.149 0.056 PB L2
ENSG00000204084 INPP5B -79710 sc-eQTL 6.75e-02 -0.435 0.235 0.056 PB L2
ENSG00000238063 LINC01685 -607478 sc-eQTL 9.03e-01 0.026 0.212 0.056 PB L2
ENSG00000116922 C1orf109 175098 sc-eQTL 6.78e-01 -0.0992 0.238 0.058 gdT L2
ENSG00000116954 RRAGC -992425 sc-eQTL 8.07e-01 -0.0599 0.245 0.058 gdT L2
ENSG00000134690 CDCA8 174866 sc-eQTL 9.01e-01 -0.0255 0.205 0.058 gdT L2
ENSG00000134697 GNL2 271410 sc-eQTL 8.33e-01 0.0532 0.251 0.058 gdT L2
ENSG00000163874 ZC3H12A 392767 sc-eQTL 9.26e-01 0.0164 0.177 0.058 gdT L2
ENSG00000163875 MEAF6 352573 sc-eQTL 4.26e-01 -0.18 0.226 0.058 gdT L2
ENSG00000163877 SNIP1 313054 sc-eQTL 9.08e-01 0.0268 0.231 0.058 gdT L2
ENSG00000183386 FHL3 -138259 sc-eQTL 4.45e-01 -0.168 0.219 0.058 gdT L2
ENSG00000183431 SF3A3 -122728 sc-eQTL 1.00e+00 -3.03e-05 0.243 0.058 gdT L2
ENSG00000183520 UTP11 -141911 sc-eQTL 6.06e-01 -0.131 0.254 0.058 gdT L2
ENSG00000185090 MANEAL 73545 sc-eQTL 1.67e-01 0.279 0.201 0.058 gdT L2
ENSG00000185668 POU3F1 -179446 sc-eQTL 6.10e-01 0.107 0.21 0.058 gdT L2
ENSG00000188786 MTF1 7755 sc-eQTL 8.51e-01 0.0459 0.243 0.058 gdT L2
ENSG00000196449 YRDC 59139 sc-eQTL 6.61e-01 0.0909 0.207 0.058 gdT L2
ENSG00000197982 C1orf122 60368 sc-eQTL 2.39e-01 -0.253 0.214 0.058 gdT L2
ENSG00000204084 INPP5B -79710 sc-eQTL 8.57e-01 0.0414 0.229 0.058 gdT L2
ENSG00000233621 LINC01137 392936 sc-eQTL 8.64e-01 -0.0365 0.213 0.058 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116922 C1orf109 175098 eQTL 0.00124 -0.193 0.0595 0.0 0.0 0.0314
ENSG00000183386 FHL3 -138259 eQTL 6.25e-13 -0.667 0.0914 0.0395 0.00375 0.0314
ENSG00000183431 SF3A3 -122728 eQTL 2.55e-08 -0.483 0.0859 0.0 0.0 0.0314
ENSG00000183520 UTP11 -141911 eQTL 0.000784 -0.161 0.0478 0.0 0.0 0.0314
ENSG00000197982 C1orf122 60368 eQTL 3.31e-02 0.107 0.0502 0.0 0.0 0.0314
ENSG00000204084 INPP5B -79710 eQTL 7.21e-11 0.63 0.0955 0.0 0.0 0.0314
ENSG00000230955 AL929472.2 6650 eQTL 1.25e-05 0.403 0.0917 0.0 0.0 0.0314
ENSG00000233621 LINC01137 392936 eQTL 5.97e-07 0.317 0.063 0.00407 0.00111 0.0314


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116922 C1orf109 175098 1.68e-06 2.68e-06 2.83e-07 1.38e-06 3.68e-07 6.42e-07 1.31e-06 4.27e-07 1.75e-06 7.25e-07 1.81e-06 1.3e-06 2.84e-06 8.7e-07 3.44e-07 1.06e-06 1.14e-06 1.13e-06 5.81e-07 4.81e-07 7.69e-07 1.96e-06 1.54e-06 6.41e-07 2.57e-06 7.75e-07 1.14e-06 9.36e-07 1.73e-06 1.47e-06 7.63e-07 2.06e-07 2.65e-07 5.53e-07 7.4e-07 4.89e-07 6.79e-07 2.95e-07 4.53e-07 2.09e-07 2.68e-07 3.22e-06 3.59e-07 1.57e-07 3.24e-07 3.25e-07 2.66e-07 8.48e-08 1.71e-07
ENSG00000183386 FHL3 -138259 2.91e-06 3.7e-06 2.51e-07 1.99e-06 4.74e-07 8.45e-07 2.12e-06 6.34e-07 1.97e-06 1.09e-06 2.6e-06 1.4e-06 3.71e-06 1.43e-06 9.28e-07 1.68e-06 1.14e-06 2.17e-06 7.88e-07 1.15e-06 9.18e-07 3.14e-06 2.61e-06 1.02e-06 4.02e-06 1.23e-06 1.47e-06 1.49e-06 2.17e-06 1.97e-06 1.81e-06 2.46e-07 3.94e-07 1.09e-06 1.27e-06 6.6e-07 7.3e-07 4.03e-07 7.16e-07 2.57e-07 3.53e-07 4.22e-06 4.96e-07 1.99e-07 3.71e-07 3.11e-07 5.17e-07 1.4e-07 3.12e-07
ENSG00000183431 SF3A3 -122728 3.64e-06 4.55e-06 3.27e-07 1.97e-06 6.15e-07 8.39e-07 2.51e-06 8.2e-07 2.51e-06 1.42e-06 3.41e-06 1.72e-06 5.3e-06 1.35e-06 9.1e-07 2e-06 1.58e-06 2.19e-06 1.38e-06 1.43e-06 1.36e-06 3.46e-06 3.36e-06 1.22e-06 4.77e-06 1.1e-06 1.79e-06 1.78e-06 3.2e-06 2.71e-06 1.98e-06 2.48e-07 5.29e-07 1.25e-06 1.67e-06 9.21e-07 8.3e-07 4.19e-07 1.07e-06 3.76e-07 2.87e-07 5.18e-06 5.79e-07 1.81e-07 3.3e-07 3.61e-07 8.03e-07 2.51e-07 2.1e-07
ENSG00000183520 UTP11 -141911 2.7e-06 3.5e-06 2.62e-07 2.02e-06 4.76e-07 8.62e-07 1.92e-06 6.05e-07 1.92e-06 9.61e-07 2.55e-06 1.25e-06 3.64e-06 1.4e-06 8.59e-07 1.7e-06 1.1e-06 1.93e-06 7.13e-07 1.07e-06 8.81e-07 3.12e-06 2.47e-06 9.56e-07 4.2e-06 1.21e-06 1.49e-06 1.45e-06 2.1e-06 1.78e-06 1.81e-06 2.42e-07 3.7e-07 1.12e-06 1.02e-06 6.32e-07 6.46e-07 3.81e-07 6.42e-07 1.87e-07 3.35e-07 4.17e-06 4.41e-07 1.99e-07 3.89e-07 3.36e-07 4.95e-07 1.16e-07 2.82e-07
ENSG00000204084 INPP5B -79710 4.99e-06 6.81e-06 6.91e-07 3.4e-06 1.62e-06 1.56e-06 6.54e-06 1.05e-06 5e-06 2.78e-06 7.02e-06 3.36e-06 9.02e-06 2.13e-06 1.12e-06 4.06e-06 1.94e-06 3.82e-06 1.61e-06 1.19e-06 2.78e-06 5.49e-06 4.68e-06 1.49e-06 9.13e-06 1.95e-06 2.65e-06 1.75e-06 4.56e-06 4.98e-06 2.59e-06 5.6e-07 7.32e-07 1.54e-06 1.98e-06 8.84e-07 9.24e-07 4.59e-07 1.04e-06 4.27e-07 2.66e-07 8.09e-06 4.37e-07 1.8e-07 4.38e-07 1.13e-06 1.05e-06 2.4e-07 3.58e-07
ENSG00000230955 AL929472.2 6650 3.81e-05 3.46e-05 6.12e-06 1.59e-05 5.6e-06 1.45e-05 4.47e-05 4.49e-06 3.01e-05 1.53e-05 3.9e-05 1.65e-05 5.08e-05 1.41e-05 6.98e-06 1.9e-05 1.65e-05 2.44e-05 7.86e-06 6.6e-06 1.49e-05 3.3e-05 3.24e-05 8.82e-06 4.38e-05 7.55e-06 1.46e-05 1.28e-05 3.26e-05 2.5e-05 2e-05 1.59e-06 2.48e-06 7.07e-06 1.12e-05 5.68e-06 2.93e-06 3.18e-06 4.48e-06 3.28e-06 1.67e-06 4.03e-05 3.44e-06 3.43e-07 2.3e-06 3.9e-06 4.07e-06 1.45e-06 1.49e-06
ENSG00000233621 LINC01137 392936 7.3e-07 6.09e-07 8.02e-08 3.48e-07 1.05e-07 1.57e-07 4.68e-07 8.17e-08 3.17e-07 1.89e-07 4.88e-07 3.11e-07 5.81e-07 1.1e-07 1.57e-07 1.96e-07 1.17e-07 3.02e-07 1.51e-07 8.41e-08 1.59e-07 3.13e-07 3.03e-07 1.04e-07 7.42e-07 2.2e-07 2.43e-07 1.97e-07 2.84e-07 3.3e-07 2.19e-07 5.24e-08 5.07e-08 1.18e-07 2.15e-07 5.05e-08 7.86e-08 5.25e-08 5.7e-08 5.8e-08 3.27e-08 6.49e-07 1.6e-08 1.06e-08 8.06e-08 1.75e-08 1.04e-07 0.0 4.66e-08