Genes within 1Mb (chr1:37708311:TTTC:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116922 C1orf109 16062 eQTL 1.84e-52 0.3 0.0185 0.147 0.144 0.353
ENSG00000134690 CDCA8 15830 eQTL 2.85e-07 -0.0884 0.0171 0.00286 0.00334 0.353
ENSG00000163877 SNIP1 154018 eQTL 1.49e-04 0.064 0.0168 0.0 0.0 0.353
ENSG00000169218 RSPO1 73419 pQTL 2.26e-02 -0.0409 0.0179 0.0 0.0 0.354
ENSG00000183386 FHL3 -297295 eQTL 9.50e-14 0.241 0.0318 0.00157 0.0 0.353
ENSG00000183431 SF3A3 -281764 eQTL 1.67e-10 0.193 0.0298 0.0 0.0 0.353
ENSG00000183520 UTP11 -300947 eQTL 3.05e-07 0.0853 0.0165 0.00145 0.0 0.353
ENSG00000185090 MANEAL -85491 eQTL 2.04e-02 -0.0522 0.0225 0.00127 0.0 0.353
ENSG00000196449 YRDC -99897 eQTL 1.20e-02 0.0471 0.0187 0.00244 0.0 0.353
ENSG00000197982 C1orf122 -98668 eQTL 4.54e-02 -0.0351 0.0175 0.0 0.0 0.353
ENSG00000204084 INPP5B -238746 eQTL 1.21e-04 0.131 0.0339 0.0 0.0 0.353
ENSG00000230955 AL929472.2 -152386 eQTL 1.71e-02 0.077 0.0322 0.0 0.0 0.353
ENSG00000233621 LINC01137 233900 eQTL 2.23e-08 -0.124 0.0219 0.0 0.0 0.353


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116922 C1orf109 16062 6.95e-05 3.92e-05 6.57e-06 1.6e-05 5.8e-06 1.7e-05 5.35e-05 4.44e-06 3.38e-05 1.4e-05 5.47e-05 2.12e-05 7.04e-05 1.3e-05 7.23e-06 2.25e-05 2.05e-05 3e-05 8.82e-06 7.8e-06 1.81e-05 4.9e-05 4.04e-05 1.06e-05 5.52e-05 7.81e-06 1.46e-05 1.26e-05 4.16e-05 2.67e-05 1.87e-05 1.61e-06 3.46e-06 6.44e-06 1.26e-05 5.77e-06 2.05e-06 3.14e-06 4.8e-06 3.24e-06 1.75e-06 6.82e-05 5.29e-06 1.9e-07 2.95e-06 3.67e-06 5.39e-06 2.14e-06 1.52e-06
ENSG00000134690 CDCA8 15830 6.95e-05 3.92e-05 6.57e-06 1.61e-05 5.76e-06 1.72e-05 5.41e-05 4.44e-06 3.43e-05 1.42e-05 5.47e-05 2.14e-05 7.04e-05 1.3e-05 7.32e-06 2.25e-05 2.05e-05 3e-05 8.86e-06 7.75e-06 1.81e-05 4.96e-05 4.11e-05 1.06e-05 5.57e-05 7.94e-06 1.46e-05 1.28e-05 4.16e-05 2.67e-05 1.87e-05 1.61e-06 3.46e-06 6.48e-06 1.27e-05 5.77e-06 2.04e-06 3.14e-06 4.8e-06 3.24e-06 1.75e-06 6.87e-05 5.29e-06 1.92e-07 2.95e-06 3.72e-06 5.39e-06 2.17e-06 1.52e-06
ENSG00000163877 SNIP1 154018 8.84e-06 9.23e-06 1.3e-06 5.5e-06 2.21e-06 4.28e-06 1.19e-05 1.04e-06 8.38e-06 4.26e-06 8.91e-06 4.93e-06 1.29e-05 2.82e-06 2.11e-06 5.65e-06 3.71e-06 7.27e-06 2.72e-06 2.68e-06 5.13e-06 9.08e-06 9.78e-06 3.03e-06 1.24e-05 2.8e-06 3.57e-06 1.75e-06 1.02e-05 7.71e-06 3.37e-06 4.82e-07 1.14e-06 2.26e-06 4.78e-06 1.11e-06 1.07e-06 2.02e-06 8.75e-07 8.66e-07 1.02e-06 1.4e-05 1.32e-06 1.52e-07 7.57e-07 1.77e-06 1.84e-06 6.52e-07 4.73e-07
ENSG00000183386 FHL3 -297295 3.18e-06 2.43e-06 6.07e-07 2.06e-06 7.59e-07 1.03e-06 2.53e-06 3.31e-07 1.85e-06 1.1e-06 1.99e-06 1.79e-06 3.49e-06 7.09e-07 4.8e-07 1.17e-06 1.12e-06 2.16e-06 1.36e-06 1.17e-06 1.53e-06 3.05e-06 3.3e-06 1.02e-06 3.4e-06 1.33e-06 1.11e-06 8.75e-07 2.91e-06 2.13e-06 7.63e-07 2.7e-07 6.11e-07 1.25e-06 1.91e-06 5.41e-07 7.82e-07 5.57e-07 5.97e-07 3.52e-07 4.41e-07 3.99e-06 4.73e-07 2.91e-07 4.54e-07 3.22e-07 9.64e-07 6.82e-07 3.89e-07
ENSG00000183431 SF3A3 -281764 3.58e-06 2.53e-06 6.2e-07 1.92e-06 8.54e-07 1.27e-06 2.84e-06 3.66e-07 2.17e-06 1.29e-06 2.11e-06 2.39e-06 4.2e-06 9.7e-07 7e-07 1.51e-06 1.03e-06 2.08e-06 1.41e-06 9.54e-07 1.93e-06 3.29e-06 3.45e-06 1.07e-06 4.03e-06 1.13e-06 1.21e-06 1.07e-06 3.79e-06 2.55e-06 9.97e-07 3.42e-07 5.48e-07 1.2e-06 1.9e-06 6.22e-07 8.32e-07 8.97e-07 7.38e-07 3.79e-07 4.96e-07 4.88e-06 5.97e-07 2.73e-07 5.95e-07 4.3e-07 1.02e-06 6.73e-07 4.54e-07
ENSG00000183520 UTP11 -300947 2.96e-06 2.37e-06 7.09e-07 1.83e-06 6.85e-07 1.03e-06 2.47e-06 3.22e-07 1.82e-06 1.03e-06 1.86e-06 1.71e-06 3.39e-06 6.19e-07 4.4e-07 1.22e-06 1.11e-06 2.15e-06 1.3e-06 1.23e-06 1.39e-06 3.03e-06 3.17e-06 1.02e-06 3.42e-06 1.29e-06 1.14e-06 8.57e-07 2.76e-06 1.95e-06 7.6e-07 2.2e-07 5.68e-07 1.1e-06 1.72e-06 5.32e-07 7.77e-07 5.58e-07 4.85e-07 3.32e-07 4.44e-07 3.89e-06 4.55e-07 2.96e-07 4.06e-07 3.21e-07 9.5e-07 7.14e-07 3.26e-07
ENSG00000185090 MANEAL -85491 1.59e-05 1.93e-05 2.52e-06 1.03e-05 2.46e-06 8.52e-06 2.95e-05 2.03e-06 1.56e-05 6.52e-06 1.94e-05 7.38e-06 2.79e-05 4.54e-06 4.78e-06 8.97e-06 8.12e-06 1.49e-05 4.15e-06 3.83e-06 8.17e-06 1.73e-05 2e-05 5.48e-06 2.61e-05 4.86e-06 7.15e-06 5.4e-06 1.86e-05 1.35e-05 7.97e-06 9.76e-07 2.21e-06 3.35e-06 8.41e-06 2.65e-06 1.71e-06 2.48e-06 2.04e-06 1.26e-06 1.19e-06 3.18e-05 1.82e-06 1.73e-07 2e-06 2.35e-06 3.71e-06 1.3e-06 9.21e-07
ENSG00000196449 YRDC -99897 1.41e-05 1.52e-05 2.51e-06 9.25e-06 2.42e-06 7.14e-06 2.4e-05 1.58e-06 1.35e-05 5.9e-06 1.59e-05 6.66e-06 2.33e-05 3.9e-06 4.25e-06 7.85e-06 6.94e-06 1.24e-05 3.61e-06 3.14e-06 7.27e-06 1.42e-05 1.74e-05 4.74e-06 2.29e-05 4.33e-06 6.2e-06 4.71e-06 1.64e-05 1.15e-05 6.58e-06 1.07e-06 1.81e-06 3.03e-06 7.28e-06 2.28e-06 1.61e-06 2.38e-06 2.15e-06 9.42e-07 1.12e-06 2.62e-05 1.57e-06 1.59e-07 1.84e-06 2.35e-06 3.42e-06 1.11e-06 7.82e-07
ENSG00000232273 \N 163548 7.93e-06 9.03e-06 1.36e-06 4.92e-06 2.22e-06 4.24e-06 1.11e-05 1.01e-06 7.29e-06 4.22e-06 8.54e-06 4.77e-06 1.16e-05 2.19e-06 1.66e-06 5.1e-06 3.61e-06 6.43e-06 2.67e-06 2.63e-06 4.94e-06 8.12e-06 8.67e-06 2.68e-06 1.14e-05 2.46e-06 3.16e-06 1.8e-06 8.97e-06 7.77e-06 2.93e-06 4.43e-07 1.21e-06 2.15e-06 4.54e-06 1.13e-06 1.08e-06 1.95e-06 8.6e-07 8.05e-07 1.03e-06 1.31e-05 1.26e-06 1.5e-07 8.18e-07 1.68e-06 1.75e-06 6.85e-07 4.43e-07
ENSG00000233621 LINC01137 233900 4.48e-06 4.34e-06 9.72e-07 2.95e-06 1.64e-06 1.53e-06 6.35e-06 3.95e-07 4.76e-06 2.3e-06 3.7e-06 3.34e-06 7.51e-06 1.2e-06 1.22e-06 2.49e-06 1.63e-06 3.79e-06 1.47e-06 1.19e-06 2.71e-06 4.85e-06 4.64e-06 1.71e-06 5.26e-06 1.33e-06 1.84e-06 1.81e-06 4.47e-06 4.23e-06 1.94e-06 5.25e-07 4.63e-07 1.82e-06 2e-06 9.91e-07 9.24e-07 1.84e-06 1.34e-06 4.16e-07 7.36e-07 7.04e-06 8.05e-07 1.96e-07 7.55e-07 1.21e-06 1.05e-06 7.19e-07 5.87e-07