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Genes within 1Mb (chr1:37633415:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116922 C1orf109 -58834 sc-eQTL 1.38e-01 -0.286 0.192 0.949 B_Activated L2
ENSG00000134697 GNL2 37478 sc-eQTL 7.19e-02 -0.449 0.248 0.949 B_Activated L2
ENSG00000163874 ZC3H12A 158835 sc-eQTL 7.27e-01 0.0729 0.209 0.949 B_Activated L2
ENSG00000163875 MEAF6 118641 sc-eQTL 3.55e-01 -0.202 0.218 0.949 B_Activated L2
ENSG00000163877 SNIP1 79122 sc-eQTL 6.98e-01 0.0864 0.222 0.949 B_Activated L2
ENSG00000183431 SF3A3 -356660 sc-eQTL 3.76e-01 -0.205 0.231 0.949 B_Activated L2
ENSG00000183520 UTP11 -375843 sc-eQTL 2.31e-02 0.475 0.207 0.949 B_Activated L2
ENSG00000185090 MANEAL -160387 sc-eQTL 1.48e-02 -0.462 0.187 0.949 B_Activated L2
ENSG00000185668 POU3F1 -413378 sc-eQTL 4.80e-02 -0.372 0.187 0.949 B_Activated L2
ENSG00000188786 MTF1 -226177 sc-eQTL 6.70e-01 -0.102 0.238 0.949 B_Activated L2
ENSG00000196449 YRDC -174793 sc-eQTL 7.07e-01 0.0822 0.219 0.949 B_Activated L2
ENSG00000197982 C1orf122 -173564 sc-eQTL 5.65e-01 0.131 0.228 0.949 B_Activated L2
ENSG00000204084 INPP5B -313642 sc-eQTL 3.08e-01 -0.237 0.232 0.949 B_Activated L2
ENSG00000238063 LINC01685 -841410 sc-eQTL 8.07e-01 -0.0359 0.147 0.949 B_Activated L2
ENSG00000116922 C1orf109 -58834 sc-eQTL 8.22e-01 -0.0472 0.209 0.947 CD8_TCM L2
ENSG00000134697 GNL2 37478 sc-eQTL 4.65e-01 0.154 0.21 0.947 CD8_TCM L2
ENSG00000163874 ZC3H12A 158835 sc-eQTL 8.55e-02 0.306 0.177 0.947 CD8_TCM L2
ENSG00000163875 MEAF6 118641 sc-eQTL 3.56e-01 -0.175 0.189 0.947 CD8_TCM L2
ENSG00000163877 SNIP1 79122 sc-eQTL 7.29e-01 -0.0641 0.185 0.947 CD8_TCM L2
ENSG00000183386 FHL3 -372191 sc-eQTL 4.77e-02 -0.415 0.208 0.947 CD8_TCM L2
ENSG00000183431 SF3A3 -356660 sc-eQTL 4.28e-01 -0.151 0.19 0.947 CD8_TCM L2
ENSG00000183520 UTP11 -375843 sc-eQTL 6.95e-01 0.0843 0.215 0.947 CD8_TCM L2
ENSG00000185090 MANEAL -160387 sc-eQTL 9.93e-01 -0.00148 0.175 0.947 CD8_TCM L2
ENSG00000185668 POU3F1 -413378 sc-eQTL 1.93e-01 -0.253 0.194 0.947 CD8_TCM L2
ENSG00000188786 MTF1 -226177 sc-eQTL 6.25e-01 -0.11 0.224 0.947 CD8_TCM L2
ENSG00000196449 YRDC -174793 sc-eQTL 7.34e-01 0.0633 0.186 0.947 CD8_TCM L2
ENSG00000197982 C1orf122 -173564 sc-eQTL 9.80e-01 0.00509 0.199 0.947 CD8_TCM L2
ENSG00000204084 INPP5B -313642 sc-eQTL 1.72e-02 -0.452 0.188 0.947 CD8_TCM L2
ENSG00000233621 LINC01137 159004 sc-eQTL 8.34e-01 -0.0433 0.206 0.947 CD8_TCM L2
ENSG00000116922 C1orf109 -58834 sc-eQTL 6.82e-01 0.0786 0.192 0.95 CD8_TEM L2
ENSG00000134697 GNL2 37478 sc-eQTL 6.02e-01 -0.111 0.213 0.95 CD8_TEM L2
ENSG00000163874 ZC3H12A 158835 sc-eQTL 7.19e-01 -0.0575 0.16 0.95 CD8_TEM L2
ENSG00000163875 MEAF6 118641 sc-eQTL 7.85e-01 0.0484 0.178 0.95 CD8_TEM L2
ENSG00000163877 SNIP1 79122 sc-eQTL 3.04e-02 0.42 0.193 0.95 CD8_TEM L2
ENSG00000183386 FHL3 -372191 sc-eQTL 3.31e-02 -0.448 0.209 0.95 CD8_TEM L2
ENSG00000183431 SF3A3 -356660 sc-eQTL 9.07e-01 -0.0256 0.22 0.95 CD8_TEM L2
ENSG00000183520 UTP11 -375843 sc-eQTL 6.18e-01 -0.104 0.209 0.95 CD8_TEM L2
ENSG00000185090 MANEAL -160387 sc-eQTL 1.58e-01 0.276 0.195 0.95 CD8_TEM L2
ENSG00000185668 POU3F1 -413378 sc-eQTL 2.52e-01 0.219 0.191 0.95 CD8_TEM L2
ENSG00000188786 MTF1 -226177 sc-eQTL 1.93e-01 0.275 0.211 0.95 CD8_TEM L2
ENSG00000196449 YRDC -174793 sc-eQTL 6.44e-01 0.0945 0.204 0.95 CD8_TEM L2
ENSG00000197982 C1orf122 -173564 sc-eQTL 9.55e-01 0.0113 0.202 0.95 CD8_TEM L2
ENSG00000204084 INPP5B -313642 sc-eQTL 1.78e-02 -0.488 0.204 0.95 CD8_TEM L2
ENSG00000233621 LINC01137 159004 sc-eQTL 5.43e-01 -0.122 0.199 0.95 CD8_TEM L2
ENSG00000116922 C1orf109 -58834 sc-eQTL 9.88e-01 0.00304 0.207 0.95 Pro_T L2
ENSG00000134690 CDCA8 -59066 sc-eQTL 3.70e-02 0.259 0.123 0.95 Pro_T L2
ENSG00000134697 GNL2 37478 sc-eQTL 7.50e-01 0.0533 0.167 0.95 Pro_T L2
ENSG00000163874 ZC3H12A 158835 sc-eQTL 6.20e-01 -0.0752 0.151 0.95 Pro_T L2
ENSG00000163875 MEAF6 118641 sc-eQTL 7.59e-01 -0.0499 0.163 0.95 Pro_T L2
ENSG00000163877 SNIP1 79122 sc-eQTL 6.15e-01 0.0973 0.193 0.95 Pro_T L2
ENSG00000183386 FHL3 -372191 sc-eQTL 9.08e-01 -0.0185 0.159 0.95 Pro_T L2
ENSG00000183431 SF3A3 -356660 sc-eQTL 6.07e-01 0.0917 0.178 0.95 Pro_T L2
ENSG00000183520 UTP11 -375843 sc-eQTL 4.04e-01 -0.128 0.153 0.95 Pro_T L2
ENSG00000185090 MANEAL -160387 sc-eQTL 6.69e-01 0.0776 0.181 0.95 Pro_T L2
ENSG00000185668 POU3F1 -413378 sc-eQTL 2.50e-01 -0.208 0.18 0.95 Pro_T L2
ENSG00000188786 MTF1 -226177 sc-eQTL 3.91e-02 -0.428 0.206 0.95 Pro_T L2
ENSG00000196449 YRDC -174793 sc-eQTL 9.71e-01 -0.00665 0.186 0.95 Pro_T L2
ENSG00000197982 C1orf122 -173564 sc-eQTL 7.00e-01 0.066 0.171 0.95 Pro_T L2
ENSG00000204084 INPP5B -313642 sc-eQTL 4.90e-01 0.142 0.205 0.95 Pro_T L2
ENSG00000233621 LINC01137 159004 sc-eQTL 7.21e-01 -0.0677 0.189 0.95 Pro_T L2
ENSG00000116922 C1orf109 -58834 sc-eQTL 2.37e-01 -0.226 0.191 0.949 intMono L2
ENSG00000134697 GNL2 37478 sc-eQTL 4.94e-01 -0.146 0.212 0.949 intMono L2
ENSG00000163874 ZC3H12A 158835 sc-eQTL 6.93e-01 -0.0686 0.173 0.949 intMono L2
ENSG00000163875 MEAF6 118641 sc-eQTL 9.08e-01 -0.0244 0.211 0.949 intMono L2
ENSG00000163877 SNIP1 79122 sc-eQTL 5.45e-01 0.123 0.202 0.949 intMono L2
ENSG00000183386 FHL3 -372191 sc-eQTL 1.12e-01 0.317 0.199 0.949 intMono L2
ENSG00000183431 SF3A3 -356660 sc-eQTL 2.43e-01 0.241 0.205 0.949 intMono L2
ENSG00000183520 UTP11 -375843 sc-eQTL 4.74e-01 -0.138 0.192 0.949 intMono L2
ENSG00000188786 MTF1 -226177 sc-eQTL 8.40e-01 -0.0425 0.21 0.949 intMono L2
ENSG00000196449 YRDC -174793 sc-eQTL 2.49e-02 -0.447 0.198 0.949 intMono L2
ENSG00000197982 C1orf122 -173564 sc-eQTL 9.89e-01 0.00258 0.181 0.949 intMono L2
ENSG00000204084 INPP5B -313642 sc-eQTL 7.39e-01 0.0686 0.205 0.949 intMono L2
ENSG00000233621 LINC01137 159004 sc-eQTL 4.44e-02 0.378 0.187 0.949 intMono L2
ENSG00000116922 C1orf109 -58834 sc-eQTL 8.96e-01 -0.0253 0.194 0.948 ncMono L2
ENSG00000134697 GNL2 37478 sc-eQTL 8.01e-01 -0.0483 0.191 0.948 ncMono L2
ENSG00000163874 ZC3H12A 158835 sc-eQTL 4.42e-01 0.135 0.176 0.948 ncMono L2
ENSG00000163875 MEAF6 118641 sc-eQTL 3.27e-01 0.191 0.194 0.948 ncMono L2
ENSG00000163877 SNIP1 79122 sc-eQTL 4.50e-01 0.155 0.205 0.948 ncMono L2
ENSG00000183386 FHL3 -372191 sc-eQTL 7.11e-01 0.0789 0.213 0.948 ncMono L2
ENSG00000183431 SF3A3 -356660 sc-eQTL 2.85e-01 0.219 0.205 0.948 ncMono L2
ENSG00000183520 UTP11 -375843 sc-eQTL 1.63e-01 0.289 0.206 0.948 ncMono L2
ENSG00000188786 MTF1 -226177 sc-eQTL 7.11e-01 0.0669 0.18 0.948 ncMono L2
ENSG00000196449 YRDC -174793 sc-eQTL 4.69e-01 -0.13 0.179 0.948 ncMono L2
ENSG00000197982 C1orf122 -173564 sc-eQTL 4.23e-02 0.36 0.176 0.948 ncMono L2
ENSG00000204084 INPP5B -313642 sc-eQTL 4.95e-01 0.137 0.2 0.948 ncMono L2
ENSG00000233621 LINC01137 159004 sc-eQTL 7.73e-01 0.0546 0.189 0.948 ncMono L2
ENSG00000116922 C1orf109 -58834 sc-eQTL 7.34e-01 0.0655 0.192 0.944 pDC L2
ENSG00000134697 GNL2 37478 sc-eQTL 2.94e-01 -0.223 0.212 0.944 pDC L2
ENSG00000163874 ZC3H12A 158835 sc-eQTL 9.67e-01 -0.00911 0.218 0.944 pDC L2
ENSG00000163875 MEAF6 118641 sc-eQTL 1.85e-01 0.28 0.21 0.944 pDC L2
ENSG00000163877 SNIP1 79122 sc-eQTL 8.29e-02 0.408 0.234 0.944 pDC L2
ENSG00000183386 FHL3 -372191 sc-eQTL 3.74e-01 0.153 0.171 0.944 pDC L2
ENSG00000183431 SF3A3 -356660 sc-eQTL 8.30e-01 0.0471 0.219 0.944 pDC L2
ENSG00000183520 UTP11 -375843 sc-eQTL 5.56e-01 0.138 0.235 0.944 pDC L2
ENSG00000188786 MTF1 -226177 sc-eQTL 8.43e-01 -0.0413 0.209 0.944 pDC L2
ENSG00000196449 YRDC -174793 sc-eQTL 2.88e-01 0.208 0.195 0.944 pDC L2
ENSG00000197982 C1orf122 -173564 sc-eQTL 6.21e-01 0.106 0.215 0.944 pDC L2
ENSG00000204084 INPP5B -313642 sc-eQTL 4.98e-01 0.139 0.205 0.944 pDC L2
ENSG00000233621 LINC01137 159004 sc-eQTL 3.93e-01 0.15 0.175 0.944 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000134697 GNL2 37478 eQTL 4.97e-08 -0.225 0.0409 0.0 0.0 0.0525
ENSG00000163875 MEAF6 118641 eQTL 0.0484 0.0652 0.033 0.0 0.0 0.0525
ENSG00000163877 SNIP1 79122 eQTL 0.0195 -0.0844 0.0361 0.0 0.0 0.0525
ENSG00000196449 YRDC -174793 eQTL 0.0271 0.0885 0.04 0.00175 0.0 0.0525
ENSG00000232273 FTH1P1 88652 eQTL 3.62e-05 -0.217 0.0522 0.0328 0.0236 0.0525

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000134697 GNL2 37478 1.3e-05 1.71e-05 2.51e-06 8.75e-06 2.36e-06 5.45e-06 1.46e-05 2.16e-06 1.31e-05 6.09e-06 1.71e-05 6.65e-06 2.28e-05 5.17e-06 3.95e-06 7.72e-06 7.55e-06 1e-05 3.31e-06 3.29e-06 6.44e-06 1.28e-05 1.17e-05 3.36e-06 2.22e-05 4.73e-06 7.16e-06 5.35e-06 1.37e-05 1.2e-05 8.9e-06 9.67e-07 1.28e-06 3.5e-06 5.77e-06 2.83e-06 1.76e-06 1.99e-06 2.08e-06 1.03e-06 1.02e-06 1.77e-05 1.82e-06 1.56e-07 8.18e-07 1.72e-06 1.74e-06 7.99e-07 4.56e-07
ENSG00000163877 SNIP1 79122 5.52e-06 9.39e-06 7.57e-07 4.02e-06 1.59e-06 1.53e-06 7.57e-06 1.2e-06 5.24e-06 3.31e-06 8.89e-06 2.82e-06 1.07e-05 2.85e-06 1.03e-06 3.81e-06 3.58e-06 3.93e-06 1.58e-06 1.63e-06 2.77e-06 7.58e-06 4.79e-06 1.7e-06 9e-06 2.1e-06 2.97e-06 1.83e-06 5.55e-06 6.7e-06 3.88e-06 4.34e-07 6.95e-07 1.64e-06 2.16e-06 1.25e-06 1.08e-06 4.82e-07 8.97e-07 4.88e-07 2.08e-07 8.28e-06 6.73e-07 1.86e-07 4.39e-07 1.14e-06 1.01e-06 6.91e-07 5.74e-07
ENSG00000183520 \N -375843 3.62e-07 2.4e-07 7.92e-08 2.44e-07 1.07e-07 8.75e-08 2.63e-07 6.75e-08 1.96e-07 1.28e-07 2.84e-07 1.46e-07 4.11e-07 8.42e-08 1.01e-07 9.6e-08 6.17e-08 2.56e-07 8.93e-08 7.05e-08 1.52e-07 2.3e-07 1.73e-07 4.27e-08 2.86e-07 1.51e-07 1.29e-07 1.42e-07 1.34e-07 1.89e-07 1.93e-07 5.3e-08 4.98e-08 9.5e-08 5.65e-08 6.52e-08 6.57e-08 7.63e-08 6.35e-08 4.41e-08 5.43e-08 2.43e-07 3.14e-08 7.23e-09 3.4e-08 1.01e-08 8.98e-08 2.8e-09 5.93e-08
ENSG00000196449 YRDC -174793 1.41e-06 2.09e-06 2.88e-07 1.28e-06 3.45e-07 5.83e-07 1.52e-06 4.16e-07 1.71e-06 7.14e-07 1.91e-06 8.93e-07 2.84e-06 4.76e-07 3.44e-07 9.92e-07 1.07e-06 1.09e-06 5.36e-07 4.69e-07 6.48e-07 1.95e-06 1.1e-06 5.41e-07 2.4e-06 7.46e-07 1.06e-06 8.86e-07 1.57e-06 1.4e-06 8.88e-07 2.61e-07 3.19e-07 6.58e-07 6.04e-07 5.99e-07 7.26e-07 2.92e-07 4.94e-07 2.45e-07 1.92e-07 2.23e-06 3.37e-07 8.08e-08 1.67e-07 2.32e-07 2.35e-07 1.15e-07 3.01e-07
ENSG00000232273 FTH1P1 88652 5.1e-06 7.73e-06 6.39e-07 3.49e-06 1.35e-06 1.76e-06 5.49e-06 1.09e-06 4.65e-06 2.82e-06 7.5e-06 3.31e-06 9.47e-06 1.91e-06 1.04e-06 3.79e-06 2.72e-06 3.85e-06 1.53e-06 1.34e-06 2.71e-06 6.14e-06 4.52e-06 1.39e-06 8.24e-06 1.96e-06 2.34e-06 1.71e-06 4.46e-06 5.28e-06 3.25e-06 5.41e-07 5.4e-07 1.79e-06 2.05e-06 1.17e-06 1e-06 4.57e-07 9.42e-07 3.42e-07 1.51e-07 7.55e-06 4.9e-07 1.68e-07 4.01e-07 9.16e-07 7.44e-07 4.27e-07 4.38e-07