Genes within 1Mb (chr1:37624651:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000134697 GNL2 28714 eQTL 8.46e-19 0.192 0.0213 0.0 0.0 0.23
ENSG00000163875 MEAF6 109877 eQTL 2.46e-04 -0.0645 0.0175 0.0 0.0 0.23
ENSG00000163877 SNIP1 70358 eQTL 2.64e-108 0.377 0.0149 0.0 0.00474 0.23
ENSG00000163879 DNALI1 67732 eQTL 1.47e-02 0.112 0.046 0.0 0.0 0.23
ENSG00000185090 MANEAL -169151 eQTL 6.45e-02 -0.0475 0.0257 0.00107 0.0 0.23
ENSG00000196449 YRDC -183557 eQTL 3.92e-02 0.0441 0.0214 0.00115 0.0 0.23
ENSG00000204084 INPP5B -322406 eQTL 1.18e-02 -0.0978 0.0387 0.0 0.0 0.23
ENSG00000230955 AL929472.2 -236046 eQTL 4.95e-02 -0.0723 0.0368 0.0 0.0 0.23
ENSG00000233621 LINC01137 150240 eQTL 9.04e-03 -0.0662 0.0253 0.0 0.0 0.23


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000134697 GNL2 28714 1.34e-05 1.46e-05 2.64e-06 8.45e-06 2.5e-06 6.55e-06 1.95e-05 2.39e-06 1.35e-05 6.76e-06 1.8e-05 6.94e-06 2.5e-05 5.28e-06 4.38e-06 8.94e-06 7.72e-06 1.19e-05 4.21e-06 3.76e-06 7.03e-06 1.31e-05 1.36e-05 4.71e-06 2.4e-05 4.96e-06 7.67e-06 6.04e-06 1.58e-05 1.49e-05 9.59e-06 9.49e-07 1.44e-06 4.03e-06 6.09e-06 3.83e-06 1.72e-06 2.4e-06 2.84e-06 2.03e-06 1.14e-06 1.82e-05 2.23e-06 2.36e-07 1.36e-06 2.35e-06 2.15e-06 8.55e-07 6.24e-07
ENSG00000163875 MEAF6 109877 4.46e-06 4.79e-06 8.56e-07 2.56e-06 1.32e-06 1.57e-06 4.23e-06 9.54e-07 4.55e-06 2.26e-06 4.96e-06 3.54e-06 7.38e-06 2.43e-06 1.43e-06 3.13e-06 2.06e-06 3.36e-06 1.48e-06 9.86e-07 2.67e-06 4.49e-06 3.84e-06 1.38e-06 5.39e-06 1.65e-06 2.66e-06 1.81e-06 4.23e-06 4.14e-06 2.72e-06 5.93e-07 6.31e-07 1.79e-06 2.08e-06 8.84e-07 9.05e-07 4.6e-07 9.31e-07 3.8e-07 4.26e-07 5.79e-06 4e-07 1.67e-07 4.86e-07 4.11e-07 7.76e-07 3.18e-07 3.89e-07
ENSG00000163877 SNIP1 70358 6.95e-06 8.04e-06 1.04e-06 3.87e-06 1.85e-06 2.76e-06 9.23e-06 1.28e-06 5.2e-06 3.77e-06 9.1e-06 3.69e-06 1.12e-05 3.14e-06 1.55e-06 4.76e-06 3.62e-06 3.89e-06 2.19e-06 2e-06 3.2e-06 7.4e-06 5.66e-06 2.06e-06 9.83e-06 2.35e-06 3.57e-06 2.11e-06 6.99e-06 7.76e-06 3.95e-06 4.81e-07 7.36e-07 2.75e-06 2.38e-06 2.03e-06 1.27e-06 9.82e-07 1.26e-06 8.05e-07 8.27e-07 8.16e-06 8.75e-07 1.59e-07 6.87e-07 8.79e-07 1.05e-06 6.91e-07 6e-07
ENSG00000188786 \N -234941 1.4e-06 1.13e-06 2.45e-07 1.19e-06 3.58e-07 6.02e-07 1.47e-06 3.98e-07 1.44e-06 5.93e-07 1.84e-06 8.48e-07 2.45e-06 2.59e-07 4.96e-07 9.57e-07 9.05e-07 9.52e-07 8.2e-07 6.26e-07 7.49e-07 1.69e-06 9.97e-07 5.57e-07 2.25e-06 6.52e-07 9.31e-07 7.45e-07 1.48e-06 1.17e-06 8.17e-07 2.24e-07 2.65e-07 6.67e-07 5.92e-07 4.6e-07 6.37e-07 2.34e-07 4.52e-07 3.24e-07 2.88e-07 1.64e-06 1.66e-07 3.39e-08 2.81e-07 1.11e-07 2.17e-07 3.7e-08 1.91e-07
ENSG00000204084 INPP5B -322406 1.26e-06 8.9e-07 2.52e-07 3.22e-07 1.19e-07 3.2e-07 8.39e-07 2.47e-07 8.46e-07 2.77e-07 1.09e-06 6.07e-07 1.37e-06 2.09e-07 4.39e-07 4.84e-07 6.44e-07 5.27e-07 3.84e-07 3.31e-07 2.38e-07 6.48e-07 5.87e-07 3.59e-07 1.54e-06 2.4e-07 5.49e-07 4.06e-07 7.07e-07 9.25e-07 4.54e-07 4.44e-08 1.35e-07 2.74e-07 3.32e-07 2.91e-07 2.14e-07 1.15e-07 1.6e-07 8.43e-09 1.8e-07 1.02e-06 6.28e-08 1.55e-08 1.73e-07 4.33e-08 1.43e-07 5.79e-08 8.09e-08
ENSG00000230955 AL929472.2 -236046 1.43e-06 1.13e-06 2.43e-07 1.17e-06 3.36e-07 5.99e-07 1.46e-06 3.85e-07 1.4e-06 5.99e-07 1.85e-06 8.56e-07 2.46e-06 2.68e-07 5.06e-07 9.85e-07 9e-07 9.45e-07 8.15e-07 6.36e-07 7.54e-07 1.69e-06 9.91e-07 5.66e-07 2.26e-06 6.57e-07 9.36e-07 7.19e-07 1.47e-06 1.2e-06 8e-07 2.24e-07 2.64e-07 6.61e-07 5.9e-07 4.32e-07 6.22e-07 2.44e-07 4.75e-07 3.23e-07 2.88e-07 1.62e-06 1.53e-07 3.38e-08 2.8e-07 1.2e-07 2.16e-07 3.68e-08 1.9e-07