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Genes within 1Mb (chr1:37447406:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116898 MRPS15 983022 sc-eQTL 2.29e-01 0.302 0.25 0.052 gdT L2
ENSG00000116922 C1orf109 -244843 sc-eQTL 1.17e-01 -0.389 0.246 0.052 gdT L2
ENSG00000134690 CDCA8 -245075 sc-eQTL 5.45e-01 0.13 0.214 0.052 gdT L2
ENSG00000134697 GNL2 -148531 sc-eQTL 9.21e-01 -0.0262 0.262 0.052 gdT L2
ENSG00000163874 ZC3H12A -27174 sc-eQTL 9.88e-02 0.303 0.182 0.052 gdT L2
ENSG00000163875 MEAF6 -67368 sc-eQTL 3.73e-01 0.21 0.235 0.052 gdT L2
ENSG00000163877 SNIP1 -106887 sc-eQTL 6.87e-01 -0.0972 0.241 0.052 gdT L2
ENSG00000183386 FHL3 -558200 sc-eQTL 1.88e-02 0.534 0.225 0.052 gdT L2
ENSG00000183431 SF3A3 -542669 sc-eQTL 9.74e-01 -0.00822 0.253 0.052 gdT L2
ENSG00000183520 UTP11 -561852 sc-eQTL 9.33e-01 -0.0222 0.265 0.052 gdT L2
ENSG00000185090 MANEAL -346396 sc-eQTL 7.53e-01 -0.0665 0.211 0.052 gdT L2
ENSG00000185668 POU3F1 -599387 sc-eQTL 7.96e-01 0.0567 0.219 0.052 gdT L2
ENSG00000188786 MTF1 -412186 sc-eQTL 2.36e-01 0.3 0.252 0.052 gdT L2
ENSG00000196449 YRDC -360802 sc-eQTL 2.79e-01 0.233 0.215 0.052 gdT L2
ENSG00000197982 C1orf122 -359573 sc-eQTL 9.36e-01 0.018 0.224 0.052 gdT L2
ENSG00000204084 INPP5B -499651 sc-eQTL 9.55e-01 -0.0135 0.239 0.052 gdT L2
ENSG00000233621 LINC01137 -27005 sc-eQTL 2.77e-01 0.241 0.221 0.052 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000119535 CSF3R 964128 eQTL 0.0147 -0.0512 0.0209 0.0 0.0 0.0363
ENSG00000134697 GNL2 -148531 eQTL 0.0129 -0.123 0.0496 0.0 0.0 0.0363
ENSG00000163877 SNIP1 -106887 eQTL 0.00447 -0.123 0.0432 0.0 0.0 0.0363
ENSG00000233621 LINC01137 -27005 eQTL 0.0184 0.134 0.0568 0.0 0.0 0.0363

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000134697 GNL2 -148531 3.39e-06 2.47e-06 2.51e-07 1.7e-06 4.92e-07 8.4e-07 1.88e-06 4.44e-07 1.74e-06 7.42e-07 2.27e-06 1.47e-06 3.49e-06 1.23e-06 5.7e-07 1.2e-06 9.73e-07 1.92e-06 5.76e-07 5.9e-07 6.35e-07 2.26e-06 2.16e-06 9.6e-07 3.53e-06 1.22e-06 1.22e-06 1.1e-06 1.91e-06 1.72e-06 1.55e-06 3.03e-07 3.47e-07 9.63e-07 9.09e-07 6.39e-07 7.1e-07 3.34e-07 5.97e-07 2.22e-07 2.56e-07 3.37e-06 4.33e-07 1.57e-07 3.45e-07 3.17e-07 3.98e-07 1.05e-07 2.07e-07