logo

Genes within 1Mb (chr1:37367144:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116898 MRPS15 902760 sc-eQTL 5.35e-01 0.0884 0.142 0.056 PB L2
ENSG00000116922 C1orf109 -325105 sc-eQTL 3.74e-01 0.22 0.247 0.056 PB L2
ENSG00000134697 GNL2 -228793 sc-eQTL 5.25e-02 0.442 0.226 0.056 PB L2
ENSG00000163874 ZC3H12A -107436 sc-eQTL 2.28e-01 -0.255 0.211 0.056 PB L2
ENSG00000163875 MEAF6 -147630 sc-eQTL 4.29e-01 -0.178 0.224 0.056 PB L2
ENSG00000163877 SNIP1 -187149 sc-eQTL 9.94e-01 0.00166 0.23 0.056 PB L2
ENSG00000181817 LSM10 969236 sc-eQTL 7.81e-01 0.0555 0.199 0.056 PB L2
ENSG00000183431 SF3A3 -622931 sc-eQTL 3.93e-01 0.185 0.216 0.056 PB L2
ENSG00000183520 UTP11 -642114 sc-eQTL 6.53e-01 0.0716 0.159 0.056 PB L2
ENSG00000185090 MANEAL -426658 sc-eQTL 7.62e-01 -0.0732 0.241 0.056 PB L2
ENSG00000185668 POU3F1 -679649 sc-eQTL 8.81e-01 0.0345 0.229 0.056 PB L2
ENSG00000188786 MTF1 -492448 sc-eQTL 6.33e-01 -0.117 0.245 0.056 PB L2
ENSG00000196182 STK40 981248 sc-eQTL 3.99e-01 0.184 0.218 0.056 PB L2
ENSG00000196449 YRDC -441064 sc-eQTL 3.96e-01 -0.217 0.255 0.056 PB L2
ENSG00000197982 C1orf122 -439835 sc-eQTL 1.70e-01 -0.222 0.161 0.056 PB L2
ENSG00000204084 INPP5B -579913 sc-eQTL 5.59e-01 0.151 0.258 0.056 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116885 OSCP1 916693 eQTL 0.00505 0.152 0.054 0.0 0.0 0.0447
ENSG00000163877 SNIP1 -187149 eQTL 0.045 -0.079 0.0393 0.0 0.0 0.0447

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000185668 \N -679650 1.13e-06 7.98e-07 3.45e-07 3.38e-07 1.05e-07 3.41e-07 7.1e-07 1.45e-07 7.11e-07 2.98e-07 9.47e-07 5.22e-07 9.44e-07 2.08e-07 4.55e-07 4.96e-07 5.56e-07 5.31e-07 4.54e-07 3.06e-07 2.53e-07 5.11e-07 5.21e-07 3.53e-07 1.35e-06 2.64e-07 6.16e-07 4.77e-07 5.78e-07 8.48e-07 3.77e-07 3.82e-08 4.77e-08 1.77e-07 3.57e-07 3.35e-07 1.84e-07 1.13e-07 8.61e-08 8.36e-09 1.03e-07 5.87e-07 5.33e-08 1.21e-08 1.92e-07 5.94e-08 1.83e-07 8.58e-08 5.26e-08