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Genes within 1Mb (chr1:37317273:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116898 MRPS15 852889 sc-eQTL 6.66e-01 0.0982 0.227 0.949 B_Activated L2
ENSG00000116922 C1orf109 -374976 sc-eQTL 3.82e-01 -0.164 0.188 0.949 B_Activated L2
ENSG00000134697 GNL2 -278664 sc-eQTL 9.73e-01 0.00832 0.244 0.949 B_Activated L2
ENSG00000163874 ZC3H12A -157307 sc-eQTL 9.40e-01 0.0154 0.203 0.949 B_Activated L2
ENSG00000163875 MEAF6 -197501 sc-eQTL 4.08e-01 0.176 0.212 0.949 B_Activated L2
ENSG00000163877 SNIP1 -237020 sc-eQTL 7.21e-01 -0.0775 0.216 0.949 B_Activated L2
ENSG00000181817 LSM10 919365 sc-eQTL 2.04e-01 0.246 0.193 0.949 B_Activated L2
ENSG00000183431 SF3A3 -672802 sc-eQTL 8.02e-01 -0.0566 0.225 0.949 B_Activated L2
ENSG00000183520 UTP11 -691985 sc-eQTL 6.37e-01 0.0966 0.205 0.949 B_Activated L2
ENSG00000185090 MANEAL -476529 sc-eQTL 1.29e-01 0.281 0.184 0.949 B_Activated L2
ENSG00000185668 POU3F1 -729520 sc-eQTL 2.93e-01 -0.193 0.183 0.949 B_Activated L2
ENSG00000188786 MTF1 -542319 sc-eQTL 6.70e-01 0.0987 0.232 0.949 B_Activated L2
ENSG00000196182 STK40 931377 sc-eQTL 8.10e-01 -0.0539 0.224 0.949 B_Activated L2
ENSG00000196449 YRDC -490935 sc-eQTL 7.10e-01 0.0793 0.213 0.949 B_Activated L2
ENSG00000197982 C1orf122 -489706 sc-eQTL 3.01e-01 -0.23 0.221 0.949 B_Activated L2
ENSG00000204084 INPP5B -629784 sc-eQTL 6.76e-01 -0.0947 0.226 0.949 B_Activated L2
ENSG00000116898 MRPS15 852889 sc-eQTL 4.27e-01 -0.174 0.219 0.95 CD4_CTL L2
ENSG00000116922 C1orf109 -374976 sc-eQTL 4.35e-01 0.164 0.21 0.95 CD4_CTL L2
ENSG00000134697 GNL2 -278664 sc-eQTL 8.47e-01 -0.0405 0.21 0.95 CD4_CTL L2
ENSG00000142694 EVA1B 993119 sc-eQTL 6.92e-01 -0.0755 0.19 0.95 CD4_CTL L2
ENSG00000163874 ZC3H12A -157307 sc-eQTL 9.31e-01 0.0164 0.19 0.95 CD4_CTL L2
ENSG00000163875 MEAF6 -197501 sc-eQTL 2.80e-01 0.228 0.211 0.95 CD4_CTL L2
ENSG00000163877 SNIP1 -237020 sc-eQTL 3.20e-01 -0.204 0.205 0.95 CD4_CTL L2
ENSG00000181817 LSM10 919365 sc-eQTL 8.17e-01 0.0456 0.197 0.95 CD4_CTL L2
ENSG00000183386 FHL3 -688333 sc-eQTL 8.37e-01 -0.0403 0.196 0.95 CD4_CTL L2
ENSG00000183431 SF3A3 -672802 sc-eQTL 6.02e-01 0.105 0.201 0.95 CD4_CTL L2
ENSG00000183520 UTP11 -691985 sc-eQTL 1.34e-02 -0.494 0.198 0.95 CD4_CTL L2
ENSG00000188786 MTF1 -542319 sc-eQTL 6.09e-02 0.4 0.212 0.95 CD4_CTL L2
ENSG00000196182 STK40 931377 sc-eQTL 9.41e-01 -0.0147 0.197 0.95 CD4_CTL L2
ENSG00000196449 YRDC -490935 sc-eQTL 9.24e-01 0.0196 0.204 0.95 CD4_CTL L2
ENSG00000197982 C1orf122 -489706 sc-eQTL 1.81e-02 0.475 0.199 0.95 CD4_CTL L2
ENSG00000204084 INPP5B -629784 sc-eQTL 7.60e-01 -0.0652 0.213 0.95 CD4_CTL L2
ENSG00000233621 LINC01137 -157138 sc-eQTL 3.64e-03 0.568 0.193 0.95 CD4_CTL L2
ENSG00000116898 MRPS15 852889 sc-eQTL 1.78e-01 0.276 0.204 0.95 CD8_TEM L2
ENSG00000116922 C1orf109 -374976 sc-eQTL 7.97e-02 0.348 0.197 0.95 CD8_TEM L2
ENSG00000134697 GNL2 -278664 sc-eQTL 9.15e-02 0.372 0.219 0.95 CD8_TEM L2
ENSG00000142694 EVA1B 993119 sc-eQTL 4.57e-01 0.157 0.21 0.95 CD8_TEM L2
ENSG00000163874 ZC3H12A -157307 sc-eQTL 7.37e-01 -0.0557 0.166 0.95 CD8_TEM L2
ENSG00000163875 MEAF6 -197501 sc-eQTL 2.09e-01 -0.231 0.184 0.95 CD8_TEM L2
ENSG00000163877 SNIP1 -237020 sc-eQTL 5.16e-01 -0.132 0.202 0.95 CD8_TEM L2
ENSG00000181817 LSM10 919365 sc-eQTL 9.52e-01 -0.0117 0.195 0.95 CD8_TEM L2
ENSG00000183386 FHL3 -688333 sc-eQTL 1.75e-01 -0.297 0.218 0.95 CD8_TEM L2
ENSG00000183431 SF3A3 -672802 sc-eQTL 8.34e-01 0.048 0.228 0.95 CD8_TEM L2
ENSG00000183520 UTP11 -691985 sc-eQTL 9.23e-01 0.0211 0.217 0.95 CD8_TEM L2
ENSG00000185090 MANEAL -476529 sc-eQTL 2.31e-01 0.244 0.203 0.95 CD8_TEM L2
ENSG00000185668 POU3F1 -729520 sc-eQTL 3.93e-02 0.408 0.196 0.95 CD8_TEM L2
ENSG00000188786 MTF1 -542319 sc-eQTL 5.19e-01 -0.142 0.219 0.95 CD8_TEM L2
ENSG00000196182 STK40 931377 sc-eQTL 4.77e-02 0.406 0.204 0.95 CD8_TEM L2
ENSG00000196449 YRDC -490935 sc-eQTL 8.11e-01 -0.0506 0.212 0.95 CD8_TEM L2
ENSG00000197982 C1orf122 -489706 sc-eQTL 5.29e-01 -0.132 0.209 0.95 CD8_TEM L2
ENSG00000204084 INPP5B -629784 sc-eQTL 1.90e-01 0.281 0.214 0.95 CD8_TEM L2
ENSG00000233621 LINC01137 -157138 sc-eQTL 7.21e-01 0.0741 0.207 0.95 CD8_TEM L2
ENSG00000116898 MRPS15 852889 sc-eQTL 7.04e-01 -0.0759 0.199 0.949 NK_CD56bright L2
ENSG00000116922 C1orf109 -374976 sc-eQTL 2.16e-01 -0.248 0.199 0.949 NK_CD56bright L2
ENSG00000134697 GNL2 -278664 sc-eQTL 6.74e-01 -0.0949 0.225 0.949 NK_CD56bright L2
ENSG00000142694 EVA1B 993119 sc-eQTL 2.58e-01 0.189 0.166 0.949 NK_CD56bright L2
ENSG00000163874 ZC3H12A -157307 sc-eQTL 2.24e-01 0.163 0.133 0.949 NK_CD56bright L2
ENSG00000163875 MEAF6 -197501 sc-eQTL 9.38e-01 -0.0158 0.202 0.949 NK_CD56bright L2
ENSG00000163877 SNIP1 -237020 sc-eQTL 7.50e-01 0.0586 0.184 0.949 NK_CD56bright L2
ENSG00000181817 LSM10 919365 sc-eQTL 5.98e-01 -0.1 0.19 0.949 NK_CD56bright L2
ENSG00000183386 FHL3 -688333 sc-eQTL 1.96e-01 -0.217 0.167 0.949 NK_CD56bright L2
ENSG00000183431 SF3A3 -672802 sc-eQTL 9.29e-01 -0.0192 0.217 0.949 NK_CD56bright L2
ENSG00000183520 UTP11 -691985 sc-eQTL 3.05e-01 -0.226 0.219 0.949 NK_CD56bright L2
ENSG00000185090 MANEAL -476529 sc-eQTL 4.62e-01 0.137 0.186 0.949 NK_CD56bright L2
ENSG00000188786 MTF1 -542319 sc-eQTL 2.88e-01 0.218 0.204 0.949 NK_CD56bright L2
ENSG00000196182 STK40 931377 sc-eQTL 6.65e-02 -0.34 0.184 0.949 NK_CD56bright L2
ENSG00000196449 YRDC -490935 sc-eQTL 5.93e-02 -0.33 0.174 0.949 NK_CD56bright L2
ENSG00000197982 C1orf122 -489706 sc-eQTL 8.33e-01 0.0401 0.19 0.949 NK_CD56bright L2
ENSG00000204084 INPP5B -629784 sc-eQTL 7.47e-01 0.0662 0.205 0.949 NK_CD56bright L2
ENSG00000233621 LINC01137 -157138 sc-eQTL 9.34e-01 -0.0166 0.199 0.949 NK_CD56bright L2
ENSG00000116898 MRPS15 852889 sc-eQTL 2.60e-01 0.256 0.227 0.947 NK_HLA L2
ENSG00000116922 C1orf109 -374976 sc-eQTL 3.78e-01 -0.189 0.214 0.947 NK_HLA L2
ENSG00000134697 GNL2 -278664 sc-eQTL 9.26e-01 0.0204 0.219 0.947 NK_HLA L2
ENSG00000142694 EVA1B 993119 sc-eQTL 6.92e-01 -0.0757 0.191 0.947 NK_HLA L2
ENSG00000163874 ZC3H12A -157307 sc-eQTL 1.87e-01 -0.216 0.163 0.947 NK_HLA L2
ENSG00000163875 MEAF6 -197501 sc-eQTL 7.59e-01 0.059 0.192 0.947 NK_HLA L2
ENSG00000163877 SNIP1 -237020 sc-eQTL 6.51e-02 0.384 0.207 0.947 NK_HLA L2
ENSG00000181817 LSM10 919365 sc-eQTL 7.88e-01 -0.0562 0.208 0.947 NK_HLA L2
ENSG00000183386 FHL3 -688333 sc-eQTL 6.69e-01 -0.0681 0.159 0.947 NK_HLA L2
ENSG00000183431 SF3A3 -672802 sc-eQTL 2.28e-01 0.262 0.217 0.947 NK_HLA L2
ENSG00000183520 UTP11 -691985 sc-eQTL 1.17e-01 -0.343 0.218 0.947 NK_HLA L2
ENSG00000185090 MANEAL -476529 sc-eQTL 2.43e-01 0.226 0.193 0.947 NK_HLA L2
ENSG00000188786 MTF1 -542319 sc-eQTL 7.51e-01 0.068 0.214 0.947 NK_HLA L2
ENSG00000196182 STK40 931377 sc-eQTL 4.84e-01 -0.133 0.19 0.947 NK_HLA L2
ENSG00000196449 YRDC -490935 sc-eQTL 1.44e-01 0.28 0.191 0.947 NK_HLA L2
ENSG00000197982 C1orf122 -489706 sc-eQTL 3.94e-01 -0.174 0.204 0.947 NK_HLA L2
ENSG00000204084 INPP5B -629784 sc-eQTL 4.77e-01 0.151 0.211 0.947 NK_HLA L2
ENSG00000233621 LINC01137 -157138 sc-eQTL 2.95e-01 0.223 0.212 0.947 NK_HLA L2
ENSG00000116898 MRPS15 852889 sc-eQTL 5.55e-01 0.147 0.248 0.948 gdT L2
ENSG00000116922 C1orf109 -374976 sc-eQTL 7.07e-01 0.0921 0.245 0.948 gdT L2
ENSG00000134690 CDCA8 -375208 sc-eQTL 3.55e-01 -0.195 0.211 0.948 gdT L2
ENSG00000134697 GNL2 -278664 sc-eQTL 6.20e-02 0.48 0.255 0.948 gdT L2
ENSG00000142694 EVA1B 993119 sc-eQTL 4.32e-01 0.176 0.223 0.948 gdT L2
ENSG00000163874 ZC3H12A -157307 sc-eQTL 9.23e-02 -0.305 0.18 0.948 gdT L2
ENSG00000163875 MEAF6 -197501 sc-eQTL 3.30e-01 0.226 0.232 0.948 gdT L2
ENSG00000163877 SNIP1 -237020 sc-eQTL 4.74e-01 -0.17 0.237 0.948 gdT L2
ENSG00000181817 LSM10 919365 sc-eQTL 4.41e-01 0.175 0.226 0.948 gdT L2
ENSG00000183386 FHL3 -688333 sc-eQTL 9.92e-01 -0.0022 0.226 0.948 gdT L2
ENSG00000183431 SF3A3 -672802 sc-eQTL 3.54e-01 -0.232 0.249 0.948 gdT L2
ENSG00000183520 UTP11 -691985 sc-eQTL 1.79e-02 0.613 0.256 0.948 gdT L2
ENSG00000185090 MANEAL -476529 sc-eQTL 6.48e-01 0.0951 0.208 0.948 gdT L2
ENSG00000185668 POU3F1 -729520 sc-eQTL 6.79e-01 0.0896 0.216 0.948 gdT L2
ENSG00000188786 MTF1 -542319 sc-eQTL 9.40e-01 -0.0187 0.25 0.948 gdT L2
ENSG00000196182 STK40 931377 sc-eQTL 5.13e-01 -0.141 0.215 0.948 gdT L2
ENSG00000196449 YRDC -490935 sc-eQTL 3.35e-01 -0.205 0.212 0.948 gdT L2
ENSG00000197982 C1orf122 -489706 sc-eQTL 2.47e-01 -0.256 0.22 0.948 gdT L2
ENSG00000204084 INPP5B -629784 sc-eQTL 4.51e-01 0.178 0.235 0.948 gdT L2
ENSG00000233621 LINC01137 -157138 sc-eQTL 5.82e-01 0.121 0.219 0.948 gdT L2
ENSG00000116898 MRPS15 852889 sc-eQTL 2.49e-01 0.254 0.22 0.949 pDC L2
ENSG00000116922 C1orf109 -374976 sc-eQTL 4.91e-01 0.14 0.203 0.949 pDC L2
ENSG00000119535 CSF3R 833995 sc-eQTL 5.19e-01 0.0895 0.139 0.949 pDC L2
ENSG00000134697 GNL2 -278664 sc-eQTL 2.95e-01 -0.236 0.225 0.949 pDC L2
ENSG00000142694 EVA1B 993119 sc-eQTL 2.59e-01 -0.195 0.173 0.949 pDC L2
ENSG00000163874 ZC3H12A -157307 sc-eQTL 4.21e-02 0.467 0.228 0.949 pDC L2
ENSG00000163875 MEAF6 -197501 sc-eQTL 8.81e-01 0.0337 0.224 0.949 pDC L2
ENSG00000163877 SNIP1 -237020 sc-eQTL 1.92e-01 -0.326 0.249 0.949 pDC L2
ENSG00000181817 LSM10 919365 sc-eQTL 7.12e-01 -0.0782 0.211 0.949 pDC L2
ENSG00000183386 FHL3 -688333 sc-eQTL 4.17e-02 -0.368 0.179 0.949 pDC L2
ENSG00000183431 SF3A3 -672802 sc-eQTL 7.31e-01 0.0798 0.232 0.949 pDC L2
ENSG00000183520 UTP11 -691985 sc-eQTL 4.20e-01 -0.201 0.249 0.949 pDC L2
ENSG00000188786 MTF1 -542319 sc-eQTL 9.79e-02 0.365 0.219 0.949 pDC L2
ENSG00000196182 STK40 931377 sc-eQTL 8.09e-02 -0.386 0.22 0.949 pDC L2
ENSG00000196449 YRDC -490935 sc-eQTL 4.51e-01 0.157 0.207 0.949 pDC L2
ENSG00000197982 C1orf122 -489706 sc-eQTL 4.65e-01 -0.166 0.227 0.949 pDC L2
ENSG00000204084 INPP5B -629784 sc-eQTL 9.78e-01 0.00593 0.217 0.949 pDC L2
ENSG00000233621 LINC01137 -157138 sc-eQTL 9.98e-01 0.000379 0.186 0.949 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000233621 LINC01137 -157138 eQTL 0.021 0.108 0.0465 0.0 0.0 0.054

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116922 \N -374976 1.24e-06 9.44e-07 3.06e-07 3.6e-07 1.87e-07 4.11e-07 8.7e-07 2.88e-07 1.09e-06 3.89e-07 1.25e-06 5.57e-07 1.54e-06 2.57e-07 4.37e-07 5.81e-07 7.62e-07 5.67e-07 4.54e-07 4.71e-07 3.24e-07 9.14e-07 6.26e-07 4.59e-07 1.71e-06 2.54e-07 6.38e-07 5.65e-07 8.4e-07 9.93e-07 5.1e-07 3.85e-08 1.37e-07 3.66e-07 3.52e-07 3.71e-07 3.37e-07 1.56e-07 1.49e-07 1.98e-08 1.85e-07 1.15e-06 7.53e-08 1.22e-08 1.92e-07 8.9e-08 1.91e-07 8.43e-08 8.09e-08