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Genes within 1Mb (chr1:37064789:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000054116 TRAPPC3 908736 sc-eQTL 8.68e-01 -0.0383 0.23 0.051 B_Activated L2
ENSG00000054118 THRAP3 840357 sc-eQTL 9.38e-01 0.0172 0.221 0.051 B_Activated L2
ENSG00000116863 ADPRHL2 975897 sc-eQTL 6.10e-01 0.117 0.229 0.051 B_Activated L2
ENSG00000116871 MAP7D1 909210 sc-eQTL 7.61e-01 0.0638 0.209 0.051 B_Activated L2
ENSG00000116898 MRPS15 600405 sc-eQTL 9.31e-01 0.0197 0.228 0.051 B_Activated L2
ENSG00000116922 C1orf109 -627460 sc-eQTL 3.36e-01 0.181 0.188 0.051 B_Activated L2
ENSG00000134697 GNL2 -531148 sc-eQTL 8.02e-01 0.0613 0.244 0.051 B_Activated L2
ENSG00000163874 ZC3H12A -409791 sc-eQTL 2.36e-01 0.241 0.202 0.051 B_Activated L2
ENSG00000163875 MEAF6 -449985 sc-eQTL 1.50e-01 -0.306 0.212 0.051 B_Activated L2
ENSG00000163877 SNIP1 -489504 sc-eQTL 6.41e-01 -0.101 0.217 0.051 B_Activated L2
ENSG00000181817 LSM10 666881 sc-eQTL 9.17e-01 0.0202 0.194 0.051 B_Activated L2
ENSG00000183431 SF3A3 -925286 sc-eQTL 2.32e-01 -0.269 0.224 0.051 B_Activated L2
ENSG00000183520 UTP11 -944469 sc-eQTL 6.84e-01 0.0837 0.205 0.051 B_Activated L2
ENSG00000185090 MANEAL -729013 sc-eQTL 1.66e-01 0.257 0.185 0.051 B_Activated L2
ENSG00000185668 POU3F1 -982004 sc-eQTL 9.02e-02 -0.311 0.183 0.051 B_Activated L2
ENSG00000188786 MTF1 -794803 sc-eQTL 5.05e-01 -0.155 0.232 0.051 B_Activated L2
ENSG00000196182 STK40 678893 sc-eQTL 3.56e-01 -0.207 0.224 0.051 B_Activated L2
ENSG00000196449 YRDC -743419 sc-eQTL 7.56e-01 0.0662 0.213 0.051 B_Activated L2
ENSG00000197982 C1orf122 -742190 sc-eQTL 2.75e-02 -0.488 0.219 0.051 B_Activated L2
ENSG00000204084 INPP5B -882268 sc-eQTL 4.21e-01 0.182 0.226 0.051 B_Activated L2
ENSG00000054116 TRAPPC3 908736 sc-eQTL 9.20e-01 0.0227 0.225 0.052 gdT L2
ENSG00000054118 THRAP3 840357 sc-eQTL 8.02e-02 0.457 0.259 0.052 gdT L2
ENSG00000116863 ADPRHL2 975897 sc-eQTL 3.49e-01 -0.238 0.253 0.052 gdT L2
ENSG00000116871 MAP7D1 909210 sc-eQTL 1.61e-01 0.302 0.214 0.052 gdT L2
ENSG00000116898 MRPS15 600405 sc-eQTL 5.08e-02 0.513 0.26 0.052 gdT L2
ENSG00000116922 C1orf109 -627460 sc-eQTL 1.10e-01 0.416 0.258 0.052 gdT L2
ENSG00000134690 CDCA8 -627692 sc-eQTL 3.18e-01 -0.224 0.224 0.052 gdT L2
ENSG00000134697 GNL2 -531148 sc-eQTL 6.12e-01 -0.14 0.275 0.052 gdT L2
ENSG00000142694 EVA1B 740635 sc-eQTL 4.78e-01 -0.169 0.238 0.052 gdT L2
ENSG00000163874 ZC3H12A -409791 sc-eQTL 8.02e-01 -0.0486 0.193 0.052 gdT L2
ENSG00000163875 MEAF6 -449985 sc-eQTL 9.44e-01 -0.0173 0.247 0.052 gdT L2
ENSG00000163877 SNIP1 -489504 sc-eQTL 3.57e-01 0.233 0.252 0.052 gdT L2
ENSG00000181817 LSM10 666881 sc-eQTL 8.11e-01 -0.0577 0.241 0.052 gdT L2
ENSG00000183386 FHL3 -940817 sc-eQTL 3.28e-02 0.51 0.236 0.052 gdT L2
ENSG00000183431 SF3A3 -925286 sc-eQTL 9.28e-01 0.0242 0.266 0.052 gdT L2
ENSG00000183520 UTP11 -944469 sc-eQTL 3.66e-01 0.251 0.277 0.052 gdT L2
ENSG00000185090 MANEAL -729013 sc-eQTL 2.34e-01 -0.263 0.22 0.052 gdT L2
ENSG00000185668 POU3F1 -982004 sc-eQTL 4.86e-01 0.161 0.23 0.052 gdT L2
ENSG00000188786 MTF1 -794803 sc-eQTL 4.27e-01 0.211 0.265 0.052 gdT L2
ENSG00000196182 STK40 678893 sc-eQTL 5.36e-01 -0.142 0.229 0.052 gdT L2
ENSG00000196449 YRDC -743419 sc-eQTL 2.88e-01 0.241 0.226 0.052 gdT L2
ENSG00000197982 C1orf122 -742190 sc-eQTL 9.74e-01 0.00764 0.235 0.052 gdT L2
ENSG00000204084 INPP5B -882268 sc-eQTL 8.86e-01 0.036 0.251 0.052 gdT L2
ENSG00000233621 LINC01137 -409622 sc-eQTL 8.99e-02 -0.393 0.23 0.052 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000204084 INPP5B -882268 eQTL 0.224 -0.113 0.0929 0.00194 0.0 0.0358

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000092850 \N 980695 2.74e-07 1.25e-07 4.08e-08 1.82e-07 9.16e-08 1e-07 1.49e-07 5.37e-08 1.45e-07 4.94e-08 1.57e-07 8.55e-08 1.45e-07 6.56e-08 6.17e-08 7.3e-08 3.98e-08 1.26e-07 5.39e-08 4.16e-08 1.08e-07 1.28e-07 1.34e-07 3.49e-08 1.4e-07 1.14e-07 1.07e-07 9.61e-08 1.09e-07 1.07e-07 9.7e-08 3.87e-08 3.16e-08 8.34e-08 7.36e-08 3.95e-08 5.05e-08 9.25e-08 6.54e-08 3.8e-08 5.34e-08 1.33e-07 4.7e-08 2.55e-08 4.7e-08 1.83e-08 1.19e-07 3.89e-09 5.09e-08
ENSG00000181817 \N 666881 3.21e-07 1.56e-07 6.28e-08 2.24e-07 1.01e-07 8.89e-08 2.16e-07 6.12e-08 1.85e-07 9.72e-08 1.76e-07 1.37e-07 2.38e-07 8.07e-08 5.97e-08 9.11e-08 4.45e-08 1.91e-07 7.39e-08 6.02e-08 1.18e-07 1.65e-07 1.64e-07 3.68e-08 2.28e-07 1.43e-07 1.23e-07 1.28e-07 1.37e-07 1.17e-07 1.22e-07 3.9e-08 3.46e-08 9.52e-08 5.41e-08 2.74e-08 3.91e-08 7.49e-08 6.33e-08 6.92e-08 4.73e-08 1.55e-07 4.76e-08 1.17e-08 3.61e-08 6.39e-09 8.98e-08 1.96e-09 4.81e-08