Genes within 1Mb (chr1:36691121:T:C):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000054116 TRAPPC3 535068 sc-eQTL 7.89e-01 0.0545 0.203 0.052 gdT L2
ENSG00000054118 THRAP3 466689 sc-eQTL 7.38e-01 -0.0794 0.237 0.052 gdT L2
ENSG00000092847 AGO1 821313 sc-eQTL 8.78e-01 -0.0383 0.248 0.052 gdT L2
ENSG00000092853 CLSPN 921143 sc-eQTL 7.07e-01 0.0733 0.195 0.052 gdT L2
ENSG00000116863 ADPRHL2 602229 sc-eQTL 5.31e-01 -0.144 0.229 0.052 gdT L2
ENSG00000116871 MAP7D1 535542 sc-eQTL 9.22e-01 -0.019 0.195 0.052 gdT L2
ENSG00000116898 MRPS15 226737 sc-eQTL 8.20e-01 0.0545 0.238 0.052 gdT L2
ENSG00000126070 AGO3 760403 sc-eQTL 1.19e-01 -0.355 0.226 0.052 gdT L2
ENSG00000134697 GNL2 -904816 sc-eQTL 5.40e-01 0.152 0.248 0.052 gdT L2
ENSG00000134698 AGO4 883105 sc-eQTL 9.10e-01 0.0253 0.223 0.052 gdT L2
ENSG00000142686 C1orf216 972227 sc-eQTL 6.70e-01 -0.0965 0.226 0.052 gdT L2
ENSG00000142694 EVA1B 366967 sc-eQTL 5.26e-02 0.415 0.212 0.052 gdT L2
ENSG00000163874 ZC3H12A -783459 sc-eQTL 7.16e-02 -0.313 0.173 0.052 gdT L2
ENSG00000163875 MEAF6 -823653 sc-eQTL 7.52e-01 -0.0706 0.223 0.052 gdT L2
ENSG00000163877 SNIP1 -863172 sc-eQTL 9.53e-01 -0.0136 0.228 0.052 gdT L2
ENSG00000181817 LSM10 293213 sc-eQTL 3.73e-01 0.194 0.217 0.052 gdT L2
ENSG00000196182 STK40 305225 sc-eQTL 4.24e-01 -0.166 0.207 0.052 gdT L2
ENSG00000233621 LINC01137 -783290 sc-eQTL 7.55e-01 -0.0656 0.21 0.052 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000092847 AGO1 821313 eQTL 0.0512 -0.125 0.0643 0.00128 0.0 0.0157
ENSG00000134697 GNL2 -904816 eQTL 0.038 0.151 0.0729 0.001 0.0 0.0157


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina