Genes within 1Mb (chr1:36095044:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000020129 NCDN 537571 eQTL 4.04e-02 -0.0299 0.0146 0.00119 0.0 0.363
ENSG00000054116 TRAPPC3 -61009 eQTL 1.47e-06 -0.0547 0.0113 0.0 0.0 0.363
ENSG00000092847 AGO1 225236 eQTL 5.63e-02 0.0325 0.017 0.00103 0.0 0.363
ENSG00000092850 TEKT2 10950 eQTL 9.46e-54 -0.629 0.0382 0.0 0.141 0.363
ENSG00000116560 SFPQ 901899 eQTL 4.63e-02 0.0225 0.0113 0.0 0.0 0.363
ENSG00000116819 TFAP2E 521730 eQTL 1.16e-02 0.0634 0.025 0.0 0.0 0.363
ENSG00000116863 ADPRHL2 6152 eQTL 5.13e-06 -0.0652 0.0142 0.00839 0.00899 0.363
ENSG00000116871 MAP7D1 -60535 eQTL 8.32e-08 0.0692 0.0128 0.0 0.0 0.363
ENSG00000116885 OSCP1 -355407 eQTL 3.39e-02 -0.0491 0.0231 0.0 0.0 0.363
ENSG00000134698 AGO4 287028 eQTL 2.63e-05 -0.037 0.00875 0.0 0.0 0.363
ENSG00000142686 C1orf216 376150 eQTL 6.78e-18 -0.155 0.0176 0.0 0.0 0.363
ENSG00000142687 KIAA0319L 537094 eQTL 4.07e-02 0.0236 0.0115 0.0 0.0 0.363
ENSG00000146463 ZMYM4 826077 eQTL 1.49e-04 -0.06 0.0158 0.0 0.0 0.363
ENSG00000171812 COL8A2 -30178 eQTL 4.88e-15 0.177 0.0222 0.00512 0.0212 0.363
ENSG00000181817 LSM10 -302864 eQTL 5.77e-02 0.0243 0.0128 0.0016 0.0 0.363
ENSG00000196182 STK40 -290852 eQTL 4.33e-02 -0.02 0.00989 0.0 0.0 0.363
ENSG00000239636 AC004865.2 517315 eQTL 4.56e-50 -0.426 0.0269 0.0 0.0 0.363


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000054116 TRAPPC3 -61009 8.9e-06 9.76e-06 1.34e-06 5.14e-06 2.16e-06 4.24e-06 1.03e-05 1.71e-06 7.89e-06 5.06e-06 1.12e-05 4.92e-06 1.38e-05 4e-06 2.39e-06 6.06e-06 4.16e-06 6.49e-06 2.53e-06 2.79e-06 4.67e-06 8.85e-06 7.13e-06 3.3e-06 1.27e-05 3.12e-06 4.69e-06 3.55e-06 8.26e-06 7.93e-06 4.72e-06 6.32e-07 1.14e-06 2.89e-06 3.93e-06 2.21e-06 1.55e-06 1.66e-06 1.62e-06 1.01e-06 8.23e-07 1.19e-05 1.29e-06 1.65e-07 6.97e-07 1.36e-06 1.16e-06 7.59e-07 4.77e-07
ENSG00000092850 TEKT2 10950 3.69e-05 3.01e-05 5.66e-06 1.51e-05 5.42e-06 1.42e-05 4.15e-05 4.2e-06 2.76e-05 1.45e-05 3.47e-05 1.55e-05 4.49e-05 1.28e-05 6.69e-06 1.72e-05 1.58e-05 2.42e-05 7.5e-06 6.43e-06 1.4e-05 3.03e-05 2.96e-05 8.66e-06 4.05e-05 7.46e-06 1.3e-05 1.18e-05 2.94e-05 2.47e-05 1.76e-05 1.63e-06 2.41e-06 6.84e-06 1.11e-05 5.34e-06 2.84e-06 3.18e-06 4.46e-06 3.22e-06 1.7e-06 3.56e-05 3.49e-06 3.24e-07 2.34e-06 3.59e-06 4.06e-06 1.49e-06 1.55e-06
ENSG00000116819 TFAP2E 521730 3.07e-07 1.76e-07 5.82e-08 2.24e-07 1.01e-07 8.4e-08 2.16e-07 5.56e-08 1.54e-07 9.35e-08 1.69e-07 1.23e-07 2.24e-07 8.13e-08 5.69e-08 8.71e-08 4.35e-08 1.72e-07 7.42e-08 5.87e-08 1.18e-07 1.56e-07 1.58e-07 4.07e-08 2.17e-07 1.31e-07 1.17e-07 1.1e-07 1.31e-07 1.38e-07 1.09e-07 3.78e-08 3.74e-08 9.8e-08 3.51e-08 3.11e-08 4.62e-08 8.57e-08 6.28e-08 6.31e-08 5.3e-08 1.63e-07 4.87e-08 1.9e-08 3.07e-08 1.8e-08 8.67e-08 2.07e-09 4.68e-08
ENSG00000116863 ADPRHL2 6152 4.16e-05 3.34e-05 6.4e-06 1.6e-05 6.17e-06 1.59e-05 4.66e-05 4.84e-06 3.23e-05 1.61e-05 3.92e-05 1.79e-05 5e-05 1.45e-05 7.4e-06 2.04e-05 1.88e-05 2.76e-05 8.18e-06 7.1e-06 1.65e-05 3.5e-05 3.36e-05 9.68e-06 4.66e-05 8.36e-06 1.49e-05 1.33e-05 3.36e-05 2.77e-05 2.07e-05 1.65e-06 2.75e-06 7.41e-06 1.21e-05 5.9e-06 3.22e-06 3.14e-06 5.03e-06 3.51e-06 1.67e-06 3.94e-05 4.04e-06 3.63e-07 2.7e-06 4.15e-06 4.04e-06 1.65e-06 1.5e-06
ENSG00000116871 MAP7D1 -60535 8.88e-06 9.73e-06 1.33e-06 5.09e-06 2.25e-06 4.24e-06 1.02e-05 1.69e-06 7.82e-06 5.12e-06 1.12e-05 4.92e-06 1.39e-05 3.88e-06 2.42e-06 6.25e-06 4.1e-06 6.55e-06 2.47e-06 2.82e-06 4.64e-06 8.97e-06 7.15e-06 3.25e-06 1.28e-05 3.09e-06 4.74e-06 3.57e-06 8.33e-06 7.98e-06 4.73e-06 6.75e-07 1.14e-06 2.9e-06 3.99e-06 2.3e-06 1.56e-06 1.74e-06 1.61e-06 1.01e-06 8.2e-07 1.2e-05 1.28e-06 1.65e-07 7.38e-07 1.44e-06 1.19e-06 7.28e-07 5.05e-07
ENSG00000116885 OSCP1 -355407 8.21e-07 6.65e-07 1.05e-07 3.96e-07 9.33e-08 2.64e-07 5.31e-07 1.09e-07 3.62e-07 2.34e-07 7.15e-07 3.68e-07 7.71e-07 1.1e-07 1.71e-07 2.18e-07 3.35e-07 3.67e-07 2.6e-07 1.53e-07 1.92e-07 3.87e-07 3.19e-07 1.8e-07 7.71e-07 2.34e-07 2.52e-07 2.54e-07 3.27e-07 6.42e-07 2.55e-07 7.33e-08 4.55e-08 1.36e-07 3.07e-07 1.18e-07 8.28e-08 8.33e-08 4.44e-08 2.71e-08 2.84e-08 6.27e-07 2.75e-08 1.95e-08 1.08e-07 1.75e-08 1.1e-07 1.2e-08 6.36e-08
ENSG00000134698 AGO4 287028 1.25e-06 9.44e-07 1.63e-07 3.5e-07 1.64e-07 4.39e-07 7.99e-07 2.62e-07 8.32e-07 2.67e-07 1.16e-06 5.69e-07 1.49e-06 2.12e-07 3.9e-07 4.53e-07 7.62e-07 5.16e-07 3.71e-07 3.72e-07 2.54e-07 7.06e-07 5.66e-07 4.55e-07 1.64e-06 2.4e-07 4.97e-07 4.77e-07 6.91e-07 1.02e-06 4.47e-07 3.31e-08 1.32e-07 2.46e-07 3.22e-07 2.99e-07 2.96e-07 1.12e-07 1.1e-07 9.81e-09 1.01e-07 1.26e-06 6.44e-08 5.72e-08 2.03e-07 3.92e-08 1.67e-07 7.35e-08 8.09e-08
ENSG00000142686 C1orf216 376150 7.3e-07 5.74e-07 8.51e-08 3.58e-07 9.72e-08 2.12e-07 4.93e-07 9.26e-08 2.78e-07 2.12e-07 5.58e-07 3.21e-07 6.27e-07 1.07e-07 1.45e-07 1.92e-07 2.34e-07 3.3e-07 1.97e-07 1.24e-07 1.91e-07 3.13e-07 3.02e-07 1.36e-07 6.39e-07 2.36e-07 1.97e-07 2.13e-07 2.66e-07 5.56e-07 2e-07 8.48e-08 5.51e-08 1.19e-07 2.61e-07 7.86e-08 1.18e-07 7.51e-08 5.62e-08 3.01e-08 4.07e-08 5.29e-07 1.21e-08 1.27e-08 8.24e-08 9.31e-09 8.01e-08 7.14e-09 6.03e-08
ENSG00000171812 COL8A2 -30178 1.6e-05 1.78e-05 2.86e-06 9.91e-06 2.79e-06 7.79e-06 2.2e-05 2.9e-06 1.62e-05 8.48e-06 2.04e-05 7.87e-06 2.89e-05 6.35e-06 5.09e-06 9.46e-06 8.68e-06 1.41e-05 4.18e-06 4.11e-06 7.95e-06 1.66e-05 1.66e-05 4.97e-06 2.61e-05 5.23e-06 7.95e-06 7.33e-06 1.66e-05 1.55e-05 1.05e-05 9.73e-07 1.4e-06 4.09e-06 7.03e-06 3.76e-06 1.78e-06 2.38e-06 2.83e-06 2.03e-06 1.16e-06 2.05e-05 2.52e-06 1.88e-07 1.46e-06 2.44e-06 2.6e-06 8.55e-07 7.82e-07
ENSG00000239636 AC004865.2 517315 3.07e-07 1.78e-07 5.93e-08 2.31e-07 1.01e-07 8.85e-08 2.16e-07 5.56e-08 1.54e-07 9.35e-08 1.76e-07 1.31e-07 2.29e-07 8.13e-08 5.43e-08 8.71e-08 4.25e-08 1.72e-07 7.42e-08 5.87e-08 1.18e-07 1.65e-07 1.64e-07 4.07e-08 2.17e-07 1.39e-07 1.17e-07 1.12e-07 1.31e-07 1.39e-07 1.09e-07 3.84e-08 3.74e-08 9.81e-08 3.51e-08 3.11e-08 5.02e-08 8.57e-08 6.39e-08 6.43e-08 5.34e-08 1.64e-07 4.87e-08 1.92e-08 3.29e-08 1.65e-08 7.92e-08 2.1e-09 4.55e-08