Genes within 1Mb (chr1:35788116:GAAAAGA:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000054116 TRAPPC3 -367937 eQTL 3.27e-02 -0.0267 0.0125 0.0 0.0 0.271
ENSG00000092847 AGO1 -81692 eQTL 1.72e-02 0.0445 0.0186 0.00137 0.0 0.271
ENSG00000092850 TEKT2 -295978 eQTL 4.02e-04 0.168 0.0472 0.0 0.0 0.271
ENSG00000092853 CLSPN 18138 pQTL 3.84e-02 -0.0593 0.0286 0.0 0.0 0.275
ENSG00000092853 CLSPN 18138 eQTL 7.95e-03 0.0367 0.0138 0.00167 0.0 0.271
ENSG00000116544 DLGAP3 858466 eQTL 1.75e-02 -0.0615 0.0258 0.0 0.0 0.271
ENSG00000116871 MAP7D1 -367463 eQTL 2.43e-03 -0.0432 0.0142 0.0 0.0 0.271
ENSG00000119535 CSF3R -695162 pQTL 2.49e-02 -0.055 0.0245 0.0 0.0 0.275
ENSG00000126067 PSMB2 146590 eQTL 1.33e-03 0.0412 0.0128 0.0 0.0 0.271
ENSG00000134698 AGO4 -19900 eQTL 4.63e-21 -0.0892 0.00925 0.0109 0.0119 0.271
ENSG00000142686 C1orf216 69222 eQTL 2.90e-99 -0.38 0.0159 0.0 0.0524 0.271
ENSG00000142687 KIAA0319L 230166 eQTL 6.84e-04 -0.0429 0.0126 0.0 0.0 0.271
ENSG00000146463 ZMYM4 519149 eQTL 1.16e-07 -0.0917 0.0172 0.0 0.0 0.271
ENSG00000163866 SMIM12 928361 eQTL 7.21e-03 -0.0742 0.0276 0.0 0.0 0.271
ENSG00000171812 COL8A2 -337106 eQTL 4.87e-07 0.126 0.0248 0.0 0.0 0.271
ENSG00000187513 GJA4 995117 eQTL 3.33e-02 -0.0643 0.0302 0.0 0.0 0.271
ENSG00000196182 STK40 -597780 eQTL 1.03e-05 -0.0477 0.0108 0.00224 0.00371 0.271
ENSG00000197056 ZMYM1 755944 eQTL 3.40e-03 -0.0523 0.0178 0.00153 0.0 0.271
ENSG00000239636 AC004865.2 210387 eQTL 5.51e-46 -0.449 0.0299 0.0 0.0 0.271
ENSG00000243749 TMEM35B 802763 eQTL 3.01e-11 -0.118 0.0175 0.0 0.0 0.271


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000092847 AGO1 -81692 0.000127 1.31e-05 4.31e-06 4.71e-06 2.36e-06 1.12e-05 1.95e-05 1.71e-06 5.83e-06 5.09e-06 1.19e-05 4.49e-06 1.44e-05 3.5e-06 4.13e-06 6.57e-06 4.86e-06 1.18e-05 4.36e-06 4.04e-06 6.66e-06 1.26e-05 1.81e-05 3.99e-06 1.75e-05 2.92e-06 5.83e-06 4.51e-06 1.3e-05 7.92e-06 4.32e-06 7.78e-07 1.31e-06 3.8e-06 4.27e-06 2.09e-06 1.62e-06 1.35e-06 1.63e-06 9.52e-07 8.99e-07 1.99e-05 4.93e-06 1.33e-07 1.99e-06 2.15e-06 1.38e-06 5.06e-07 5.97e-07
ENSG00000092850 TEKT2 -295978 4.26e-06 9.34e-07 2.75e-07 6.94e-07 1.78e-07 6.38e-07 1.58e-06 9.69e-08 6.62e-07 3.22e-07 1.1e-06 4.28e-07 1.82e-06 2.54e-07 4.91e-07 8.19e-07 1.01e-06 7e-07 5.29e-07 3.09e-07 4.86e-07 1.24e-06 9.66e-07 3.62e-07 1.95e-06 2.34e-07 3.37e-07 3.95e-07 9.65e-07 8.48e-07 3.66e-07 5.71e-08 4.98e-08 1.21e-06 3.84e-07 6.83e-08 1.93e-07 1.1e-07 1.11e-07 1.3e-07 4.68e-08 1.62e-06 5.92e-07 7.32e-09 1.16e-07 1.2e-07 8.24e-08 1.92e-09 4.94e-08
ENSG00000116560 \N 594971 1.24e-06 1.7e-07 4.91e-08 2.09e-07 8.83e-08 1.26e-07 2.74e-07 5.49e-08 1.45e-07 4.94e-08 1.63e-07 8.55e-08 2.24e-07 7.95e-08 5.82e-08 9.6e-08 4.63e-08 1.77e-07 6.75e-08 4.07e-08 1.22e-07 1.47e-07 1.81e-07 3.68e-08 1.65e-07 1.16e-07 1.11e-07 9.65e-08 1.31e-07 1.03e-07 9.7e-08 3.84e-08 3.35e-08 2.06e-07 3.63e-08 3.9e-08 5.05e-08 9.6e-08 6.43e-08 3.75e-08 3.82e-08 2.65e-07 3.59e-08 0.0 8.03e-08 1.55e-08 1.26e-07 4.7e-09 4.74e-08
ENSG00000126067 PSMB2 146590 2.2e-05 4.82e-06 1.3e-06 2.39e-06 1.63e-06 4.01e-06 6.05e-06 6.09e-07 1.98e-06 1.45e-06 3.32e-06 1.48e-06 5.97e-06 1.45e-06 1.17e-06 2.63e-06 1.92e-06 3.95e-06 1.47e-06 1.28e-06 2.73e-06 4.95e-06 4.72e-06 1.62e-06 6.54e-06 1.29e-06 1.8e-06 1.74e-06 4.48e-06 2.61e-06 1.98e-06 5.26e-07 5.43e-07 2.71e-06 1.95e-06 9.35e-07 8.96e-07 4.91e-07 1.35e-06 3.46e-07 2.59e-07 5.67e-06 2.7e-06 9.69e-08 5.95e-07 1.19e-06 8.36e-07 1.15e-07 2.14e-07
ENSG00000134698 AGO4 -19900 0.000198 5.86e-05 8.97e-06 1.31e-05 4.91e-06 3.65e-05 5.94e-05 4.07e-06 3.36e-05 1.42e-05 3.84e-05 1.14e-05 6.54e-05 1.7e-05 8.31e-06 2.6e-05 1.96e-05 2.56e-05 9.51e-06 8.93e-06 1.63e-05 4.96e-05 7.22e-05 1.05e-05 6.31e-05 6.27e-06 2.16e-05 1.13e-05 5.37e-05 2.4e-05 1.59e-05 9.97e-07 3.37e-06 8.68e-06 1.19e-05 5.04e-06 1.7e-06 2.39e-06 4.16e-06 2.79e-06 1.67e-06 0.00011 1.74e-05 1.79e-07 5.9e-06 4.28e-06 3.49e-06 8.24e-07 1.48e-06
ENSG00000142686 C1orf216 69222 0.000147 1.73e-05 4.87e-06 6.04e-06 2.97e-06 1.39e-05 2.37e-05 2.23e-06 8.38e-06 5.49e-06 1.45e-05 5.16e-06 1.88e-05 4.49e-06 4.78e-06 8.18e-06 6.45e-06 1.41e-05 5.99e-06 4.8e-06 7.34e-06 1.73e-05 2.45e-05 5.19e-06 2.28e-05 3.81e-06 7.53e-06 5.4e-06 1.54e-05 9.42e-06 5.43e-06 8.65e-07 1.23e-06 4.2e-06 5.12e-06 2.65e-06 1.76e-06 1.84e-06 2.17e-06 9.71e-07 9.34e-07 3e-05 5.69e-06 1.74e-07 2.59e-06 2.45e-06 1.74e-06 7.35e-07 5.77e-07
ENSG00000142687 KIAA0319L 230166 6.95e-06 2.3e-06 6.69e-07 1.35e-06 4.51e-07 8.69e-07 1.32e-06 2.71e-07 1.32e-06 5.11e-07 1.88e-06 5.79e-07 2.66e-06 3.1e-07 3.84e-07 1.07e-06 1.27e-06 1.92e-06 5.23e-07 4.58e-07 6.41e-07 1.94e-06 2.16e-06 5.81e-07 2.32e-06 6.95e-07 8.34e-07 7.03e-07 1.69e-06 1.34e-06 6.16e-07 2.57e-07 2.15e-07 1.73e-06 5.52e-07 3.92e-07 6.81e-07 2.39e-07 4.04e-07 2.44e-07 9.99e-08 2.82e-06 6.4e-07 5.74e-09 1.65e-07 2.95e-07 1.9e-07 3.14e-09 6.06e-08
ENSG00000142694 \N -536038 1.28e-06 2.3e-07 5.82e-08 2.27e-07 9.16e-08 1.71e-07 3.42e-07 5.33e-08 1.5e-07 5.67e-08 1.63e-07 9.19e-08 2.94e-07 8.07e-08 5.97e-08 1.14e-07 8.42e-08 2.21e-07 7.16e-08 4.1e-08 1.27e-07 1.89e-07 2.26e-07 3.03e-08 2.02e-07 1.21e-07 1.07e-07 9.74e-08 1.37e-07 9.49e-08 1.02e-07 4.1e-08 3.96e-08 3.49e-07 3.51e-08 3.99e-08 5.22e-08 9.62e-08 6.28e-08 5.96e-08 4.68e-08 3.66e-07 1.21e-08 4.4e-08 7.26e-08 6.98e-09 1.24e-07 4.6e-09 4.74e-08
ENSG00000146463 ZMYM4 519149 1.32e-06 2.5e-07 5.91e-08 2.35e-07 9.25e-08 1.85e-07 3.7e-07 5.33e-08 1.5e-07 6.08e-08 1.66e-07 1.05e-07 3.4e-07 8.44e-08 6.27e-08 1.17e-07 9.3e-08 2.56e-07 7.29e-08 4.23e-08 1.33e-07 1.98e-07 2.56e-07 2.64e-08 2.17e-07 1.25e-07 1.07e-07 1.01e-07 1.37e-07 1e-07 1.06e-07 4.03e-08 4.02e-08 3.91e-07 3.97e-08 3.96e-08 5.59e-08 9.22e-08 6.62e-08 6.43e-08 4.76e-08 4.04e-07 2.71e-08 3.72e-08 6.92e-08 9.86e-09 1.22e-07 4.6e-09 4.85e-08
ENSG00000171812 COL8A2 -337106 3.53e-06 9.03e-07 3.08e-07 3.15e-07 9.16e-08 6.02e-07 1.13e-06 6.72e-08 3.94e-07 2.28e-07 9.07e-07 3.08e-07 1.34e-06 1.72e-07 4.01e-07 5.87e-07 8.3e-07 5.71e-07 3.26e-07 1.41e-07 2.86e-07 7.06e-07 8.27e-07 1.73e-07 1.47e-06 2.4e-07 1.87e-07 2.54e-07 5.78e-07 5.67e-07 2.43e-07 6.68e-08 5.51e-08 8.93e-07 3.8e-07 4.6e-08 1.02e-07 6.31e-08 6.66e-08 9.44e-09 5.81e-08 1.53e-06 4.07e-07 7.51e-09 4.99e-08 7.5e-08 8.94e-08 3.81e-09 5.02e-08
ENSG00000196182 STK40 -597780 1.24e-06 1.59e-07 4.91e-08 2.09e-07 8.83e-08 1.26e-07 2.63e-07 5.49e-08 1.45e-07 4.74e-08 1.63e-07 8.55e-08 2.24e-07 7.95e-08 5.82e-08 9.6e-08 4.63e-08 1.77e-07 6.75e-08 4.07e-08 1.22e-07 1.47e-07 1.81e-07 3.68e-08 1.65e-07 1.16e-07 1.11e-07 9.65e-08 1.31e-07 1.02e-07 9.7e-08 3.84e-08 3.35e-08 2.04e-07 3.63e-08 3.9e-08 5.03e-08 9.49e-08 6.43e-08 3.75e-08 3.82e-08 2.65e-07 3.59e-08 0.0 8.03e-08 1.71e-08 1.26e-07 4.7e-09 4.61e-08
ENSG00000197056 ZMYM1 755944 8.48e-07 1.34e-07 3.59e-08 1.82e-07 9.65e-08 8.33e-08 1.67e-07 5.21e-08 1.4e-07 4.38e-08 1.62e-07 7.75e-08 1.47e-07 6.76e-08 5.99e-08 7.5e-08 4.17e-08 1.27e-07 5.36e-08 3.89e-08 1.19e-07 1.27e-07 1.5e-07 4.53e-08 1.32e-07 1.15e-07 1.1e-07 8.71e-08 1.09e-07 1.12e-07 9.58e-08 3.72e-08 2.91e-08 1.21e-07 8.96e-08 4.12e-08 4.63e-08 9.26e-08 7.2e-08 3.55e-08 3.07e-08 1.59e-07 5.2e-08 0.0 9.88e-08 1.99e-08 1.3e-07 4.82e-09 4.61e-08
ENSG00000239636 AC004865.2 210387 8.09e-06 2.49e-06 8.35e-07 1.62e-06 4.74e-07 1.35e-06 1.94e-06 3.49e-07 1.38e-06 6.61e-07 2.06e-06 7.43e-07 2.72e-06 5.23e-07 7.19e-07 1.18e-06 1.62e-06 2.2e-06 7.34e-07 7.6e-07 9.48e-07 2.43e-06 2.67e-06 8.41e-07 2.95e-06 8.55e-07 9.72e-07 9.43e-07 1.69e-06 1.23e-06 7.8e-07 2.46e-07 3e-07 1.6e-06 8.27e-07 4.53e-07 6.89e-07 3.42e-07 4.78e-07 2.27e-07 1.35e-07 3.37e-06 1.13e-06 1.28e-08 3.04e-07 4e-07 2.33e-07 2.25e-08 5.32e-08
ENSG00000243749 TMEM35B 802763 7.87e-07 1.3e-07 3.65e-08 1.8e-07 9.91e-08 8.33e-08 1.61e-07 5.24e-08 1.41e-07 4.38e-08 1.56e-07 7.88e-08 1.41e-07 6.56e-08 5.84e-08 7.36e-08 3.98e-08 1.26e-07 5.21e-08 3.74e-08 1.08e-07 1.28e-07 1.44e-07 4.67e-08 1.33e-07 1.15e-07 1.1e-07 8.7e-08 1.05e-07 1.1e-07 9.58e-08 3.52e-08 2.74e-08 1.03e-07 8.87e-08 4.19e-08 4.78e-08 9.2e-08 7.52e-08 3.18e-08 3.25e-08 1.48e-07 5.27e-08 0.0 1.01e-07 1.83e-08 1.35e-07 4.82e-09 4.72e-08