Genes within 1Mb (chr1:35664566:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000020129 NCDN 107093 eQTL 5.24e-02 -0.0278 0.0143 0.00105 0.0 0.475
ENSG00000054116 TRAPPC3 -491487 eQTL 4.60e-05 -0.0455 0.0111 0.0 0.0 0.475
ENSG00000092850 TEKT2 -419528 eQTL 4.98e-33 -0.491 0.0395 0.0 0.0 0.475
ENSG00000116544 DLGAP3 734916 eQTL 7.83e-03 -0.0616 0.0231 0.0 0.0 0.475
ENSG00000116560 SFPQ 471421 eQTL 1.63e-03 0.0349 0.0111 0.0 0.0 0.475
ENSG00000116819 TFAP2E 91252 eQTL 2.16e-04 0.0911 0.0245 0.0 0.0 0.475
ENSG00000116863 ADPRHL2 -424326 eQTL 3.50e-03 -0.0412 0.0141 0.0 0.0 0.475
ENSG00000119535 CSF3R -818712 pQTL 6.41e-03 -0.0603 0.0221 0.0 0.0 0.471
ENSG00000126067 PSMB2 23040 eQTL 1.17e-02 0.029 0.0115 0.0 0.0 0.475
ENSG00000134698 AGO4 -143450 eQTL 2.56e-06 -0.0406 0.00858 0.0 0.0 0.475
ENSG00000142686 C1orf216 -54328 eQTL 1.38e-33 -0.21 0.0167 0.0 0.0 0.475
ENSG00000142687 KIAA0319L 106616 eQTL 3.93e-04 0.0401 0.0113 0.0 0.0 0.475
ENSG00000146463 ZMYM4 395599 eQTL 1.28e-05 -0.0678 0.0155 0.0 0.0 0.475
ENSG00000163867 ZMYM6 632621 eQTL 1.46e-02 0.0346 0.0142 0.0 0.0 0.475
ENSG00000171812 COL8A2 -460656 eQTL 8.10e-05 0.0886 0.0224 0.0 0.0 0.475
ENSG00000196182 STK40 -721330 eQTL 4.00e-04 -0.0344 0.00968 0.00126 0.0 0.475
ENSG00000197056 ZMYM1 632394 eQTL 6.20e-04 -0.0547 0.0159 0.0 0.0 0.475
ENSG00000239636 AC004865.2 86837 eQTL 6.57e-181 -0.698 0.0193 0.0 0.00376 0.475
ENSG00000243749 TMEM35B 679213 eQTL 5.88e-24 -0.158 0.0152 0.0 0.0 0.475


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000054116 TRAPPC3 -491487 9.14e-07 6.26e-07 1.31e-07 3.99e-07 1.11e-07 2.46e-07 6.19e-07 1.76e-07 5.49e-07 2.81e-07 9.39e-07 4.24e-07 9.23e-07 1.6e-07 3.15e-07 2.84e-07 5.27e-07 4.33e-07 2.88e-07 1.97e-07 2.38e-07 4.66e-07 4.13e-07 2.39e-07 9.82e-07 2.57e-07 3.93e-07 2.98e-07 5.16e-07 7.36e-07 3.56e-07 5.93e-08 4.83e-08 1.77e-07 3.48e-07 1.18e-07 1.1e-07 1.1e-07 7.9e-08 8.22e-09 1.01e-07 5.96e-07 4.47e-08 5.89e-09 1.91e-07 1.42e-08 1.08e-07 1.28e-08 5.94e-08
ENSG00000092850 TEKT2 -419528 1.29e-06 8.97e-07 2.81e-07 3.25e-07 2.33e-07 3.08e-07 8.39e-07 2.88e-07 8.66e-07 2.77e-07 1.16e-06 5.55e-07 1.35e-06 2.1e-07 4.34e-07 4.84e-07 7.43e-07 5.27e-07 3.95e-07 4.06e-07 2.89e-07 6.48e-07 6.1e-07 4.61e-07 1.57e-06 2.54e-07 5.82e-07 4.75e-07 8.4e-07 9.22e-07 4.61e-07 3.75e-08 1.5e-07 2.98e-07 3.22e-07 2.42e-07 2.9e-07 1.36e-07 1.49e-07 4.17e-08 2.36e-07 9.76e-07 7.3e-08 2.66e-08 1.93e-07 4.53e-08 1.8e-07 5.86e-08 8.28e-08
ENSG00000116560 SFPQ 471421 1.01e-06 6.76e-07 1.55e-07 4.32e-07 1.19e-07 2.77e-07 6.54e-07 2.04e-07 6.53e-07 3.04e-07 1.03e-06 4.94e-07 9.97e-07 1.58e-07 3.35e-07 3.35e-07 5.63e-07 4.25e-07 3.26e-07 2.27e-07 2.42e-07 5.2e-07 4.4e-07 2.89e-07 1.16e-06 2.64e-07 4.25e-07 3.51e-07 5.78e-07 7.92e-07 3.77e-07 4.03e-08 6.78e-08 1.79e-07 3.47e-07 1.46e-07 1.42e-07 1.13e-07 8.52e-08 8.8e-09 1.35e-07 6.81e-07 5.44e-08 1.23e-08 1.89e-07 1.55e-08 1.3e-07 2.35e-08 5.47e-08
ENSG00000116819 TFAP2E 91252 5.52e-06 6.7e-06 7.17e-07 3.48e-06 2.06e-06 1.95e-06 9.07e-06 1.46e-06 4.91e-06 3.5e-06 8.91e-06 3.19e-06 1.04e-05 2.39e-06 1.47e-06 4.63e-06 3.81e-06 3.81e-06 2.19e-06 2.41e-06 3.45e-06 7.11e-06 5.51e-06 2.21e-06 9.55e-06 2.49e-06 3.58e-06 2.36e-06 7e-06 7.59e-06 3.29e-06 5.83e-07 9.22e-07 2.79e-06 2.38e-06 1.68e-06 1.38e-06 1.25e-06 1.26e-06 8.66e-07 9.79e-07 8.42e-06 6.59e-07 1.9e-07 7.72e-07 1.04e-06 9.43e-07 6.45e-07 5.09e-07
ENSG00000116863 ADPRHL2 -424326 1.31e-06 8.69e-07 2.52e-07 3.68e-07 2.28e-07 3.2e-07 8.36e-07 2.68e-07 8.46e-07 2.69e-07 1.13e-06 5.51e-07 1.3e-06 2.12e-07 4.26e-07 4.79e-07 7.62e-07 5.2e-07 3.66e-07 3.99e-07 2.86e-07 6.27e-07 5.81e-07 4.22e-07 1.53e-06 2.47e-07 5.49e-07 4.77e-07 8.16e-07 9.25e-07 4.61e-07 3.7e-08 1.37e-07 2.74e-07 3.26e-07 2.15e-07 2.57e-07 1.41e-07 1.54e-07 4.12e-08 1.99e-07 9.58e-07 6.44e-08 2.64e-08 1.82e-07 4.43e-08 1.77e-07 5.73e-08 8.09e-08
ENSG00000134698 AGO4 -143450 4.36e-06 4.75e-06 8.7e-07 2.27e-06 1.64e-06 1.27e-06 4.21e-06 9.6e-07 4.55e-06 2.13e-06 4.9e-06 3.39e-06 7.44e-06 2.04e-06 1.35e-06 2.9e-06 2.01e-06 3.09e-06 1.48e-06 1.09e-06 2.98e-06 4.6e-06 3.78e-06 1.36e-06 5.3e-06 1.76e-06 2.66e-06 1.72e-06 4.48e-06 4.19e-06 2.17e-06 5.08e-07 5.05e-07 1.44e-06 2.04e-06 9.43e-07 9.46e-07 4.24e-07 9.46e-07 4.26e-07 6.55e-07 5.03e-06 3.78e-07 1.66e-07 5.94e-07 6.75e-07 9.78e-07 4.11e-07 4.54e-07
ENSG00000142686 C1orf216 -54328 8.9e-06 9.73e-06 1.51e-06 5.5e-06 2.32e-06 4.34e-06 1.17e-05 2.18e-06 9.91e-06 5.36e-06 1.3e-05 5.57e-06 1.56e-05 3.74e-06 3.18e-06 6.36e-06 4.98e-06 7.92e-06 2.98e-06 2.99e-06 6.18e-06 9.86e-06 8.99e-06 3.39e-06 1.53e-05 4.27e-06 5.56e-06 4.68e-06 1.22e-05 9.7e-06 5.65e-06 9.95e-07 1.24e-06 3.59e-06 4.55e-06 2.62e-06 1.79e-06 2.02e-06 2.08e-06 1.11e-06 1.2e-06 1.27e-05 1.42e-06 2.91e-07 9.84e-07 1.74e-06 1.86e-06 6.16e-07 5e-07
ENSG00000142694 \N -659588 4.37e-07 2.5e-07 7.87e-08 2.53e-07 1.08e-07 1.28e-07 3.57e-07 8.11e-08 2.26e-07 1.39e-07 3.21e-07 1.96e-07 3.77e-07 8.26e-08 1.01e-07 1.26e-07 9.53e-08 2.87e-07 1.13e-07 7.26e-08 1.48e-07 2.24e-07 2.2e-07 6.65e-08 3.55e-07 2e-07 1.72e-07 1.68e-07 2.03e-07 2.26e-07 1.76e-07 6.04e-08 5.17e-08 1.01e-07 1.07e-07 4.68e-08 6.29e-08 5.25e-08 4.99e-08 7.67e-08 3.2e-08 2.41e-07 3.26e-08 2.1e-08 8.68e-08 8.07e-09 9.19e-08 0.0 5.49e-08
ENSG00000171812 COL8A2 -460656 1.07e-06 6.99e-07 1.63e-07 4.43e-07 1.54e-07 3.11e-07 6.72e-07 2.25e-07 6.71e-07 3.16e-07 1.08e-06 5.15e-07 1.05e-06 1.56e-07 3.61e-07 3.57e-07 6.07e-07 4.4e-07 3.51e-07 2.76e-07 2.43e-07 5.37e-07 4.74e-07 3.01e-07 1.28e-06 2.53e-07 4.68e-07 3.95e-07 6.47e-07 8.51e-07 3.93e-07 3.31e-08 9.46e-08 2.08e-07 3.82e-07 1.66e-07 1.64e-07 1.23e-07 7.42e-08 1.83e-08 1.3e-07 7.52e-07 5.03e-08 1.26e-08 1.84e-07 2.71e-08 1.49e-07 2.48e-08 5.25e-08
ENSG00000197056 ZMYM1 632394 5.14e-07 2.67e-07 8.51e-08 2.53e-07 1.13e-07 1.26e-07 4.05e-07 8.17e-08 2.56e-07 1.6e-07 3.66e-07 2.11e-07 4.27e-07 8.85e-08 1.24e-07 1.46e-07 1.17e-07 2.96e-07 1.5e-07 8.39e-08 1.6e-07 2.3e-07 2.48e-07 9.01e-08 4.11e-07 2.07e-07 1.83e-07 1.67e-07 2.31e-07 2.75e-07 1.86e-07 8.02e-08 5.64e-08 1.17e-07 1.31e-07 5.14e-08 6.77e-08 6e-08 5.4e-08 5.72e-08 3.43e-08 2.71e-07 3.19e-08 1.77e-08 1.1e-07 8.59e-09 1.03e-07 0.0 5.61e-08
ENSG00000239636 AC004865.2 86837 5.93e-06 7.41e-06 9.7e-07 3.67e-06 2.09e-06 2.2e-06 9.45e-06 1.51e-06 5.33e-06 4.01e-06 8.8e-06 3.62e-06 1.07e-05 2.82e-06 1.57e-06 4.66e-06 3.69e-06 3.97e-06 2.26e-06 2.52e-06 3.64e-06 7.48e-06 5.99e-06 2.46e-06 9.94e-06 2.77e-06 3.74e-06 2.47e-06 7.08e-06 7.88e-06 3.64e-06 5.43e-07 1.09e-06 2.79e-06 2.47e-06 1.84e-06 1.42e-06 1.46e-06 1.38e-06 9.06e-07 9.94e-07 8.15e-06 6.52e-07 1.97e-07 7.16e-07 1.2e-06 9.95e-07 7.23e-07 4.74e-07
ENSG00000243749 TMEM35B 679213 3.92e-07 2.3e-07 7.76e-08 2.43e-07 1.05e-07 1.19e-07 3.42e-07 7.52e-08 2.04e-07 1.28e-07 2.68e-07 1.86e-07 3.48e-07 8.42e-08 9.12e-08 1.14e-07 8.53e-08 2.75e-07 9.71e-08 8.31e-08 1.35e-07 2.07e-07 2.11e-07 5.11e-08 3.14e-07 1.9e-07 1.48e-07 1.52e-07 1.87e-07 2.01e-07 1.59e-07 5.38e-08 5.2e-08 9.81e-08 7.55e-08 3.94e-08 5.54e-08 5.92e-08 4.74e-08 7.77e-08 4.07e-08 2.19e-07 3.46e-08 2.04e-08 8.59e-08 1.01e-08 8.94e-08 0.0 4.74e-08