Genes within 1Mb (chr1:35601159:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000054116 TRAPPC3 -554894 eQTL 1.87e-03 -0.0393 0.0126 0.0 0.0 0.276
ENSG00000092847 AGO1 -268649 eQTL 2.03e-02 0.0438 0.0188 0.00132 0.0 0.276
ENSG00000092850 TEKT2 -482935 eQTL 5.22e-03 0.134 0.0479 0.0 0.0 0.276
ENSG00000116819 TFAP2E 27845 eQTL 1.33e-01 -0.0419 0.0278 0.0 0.00523 0.276
ENSG00000116871 MAP7D1 -554420 eQTL 1.50e-02 -0.0351 0.0144 0.0 0.0 0.276
ENSG00000119535 CSF3R -882119 pQTL 1.13e-02 -0.0623 0.0245 0.0 0.0 0.278
ENSG00000126067 PSMB2 -40367 eQTL 9.56e-09 0.0741 0.0128 0.0 0.0 0.276
ENSG00000134698 AGO4 -206857 eQTL 5.32e-19 -0.0855 0.0094 0.0 0.0 0.276
ENSG00000142686 C1orf216 -117735 eQTL 2.11e-68 -0.329 0.0173 0.0 0.0 0.276
ENSG00000142687 KIAA0319L 43209 eQTL 1.85e-04 -0.0477 0.0127 0.0 0.0 0.276
ENSG00000146463 ZMYM4 332192 eQTL 3.49e-09 -0.103 0.0173 0.0 0.0 0.276
ENSG00000163866 SMIM12 741404 eQTL 4.75e-03 -0.0789 0.0279 0.0 0.0 0.276
ENSG00000163867 ZMYM6 569214 eQTL 2.13e-02 0.0369 0.016 0.0 0.0 0.276
ENSG00000171812 COL8A2 -524063 eQTL 2.10e-07 0.131 0.0251 0.0 0.0 0.276
ENSG00000196182 STK40 -784737 eQTL 5.26e-06 -0.0498 0.0109 0.00337 0.00668 0.276
ENSG00000197056 ZMYM1 568987 eQTL 9.13e-03 -0.0471 0.018 0.00106 0.0 0.276
ENSG00000239636 AC004865.2 23430 eQTL 1.29e-57 -0.503 0.0294 0.0 0.0 0.276
ENSG00000243749 TMEM35B 615806 eQTL 1.48e-10 -0.115 0.0177 0.0 0.0 0.276


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116560 \N 408014 7.57e-07 4.63e-07 8.67e-08 3.66e-07 1.08e-07 1.57e-07 4.14e-07 6.72e-08 3.17e-07 1.65e-07 4.3e-07 2.09e-07 5.54e-07 1.1e-07 1.9e-07 1.26e-07 1.73e-07 3.04e-07 1.93e-07 1.31e-07 1.8e-07 2.7e-07 3.07e-07 1.03e-07 5.53e-07 2.07e-07 1.74e-07 2.18e-07 2.76e-07 3.8e-07 2.31e-07 6.42e-08 4.42e-08 1.17e-07 2.32e-07 8.32e-08 1.1e-07 6.89e-08 4.55e-08 2.53e-08 4.78e-08 7.04e-07 2.92e-08 1.81e-08 1.58e-07 1.84e-08 9.12e-08 3.09e-09 4.97e-08
ENSG00000126067 PSMB2 -40367 1.41e-05 2.11e-05 2.43e-06 1.08e-05 3.22e-06 6.65e-06 2.04e-05 3.36e-06 1.73e-05 7.65e-06 2.1e-05 8.43e-06 2.95e-05 7.48e-06 4.98e-06 9.06e-06 8.12e-06 1.33e-05 4.54e-06 4.17e-06 7.27e-06 1.65e-05 1.61e-05 4.28e-06 2.8e-05 4.5e-06 8e-06 7.23e-06 1.67e-05 1.46e-05 1.18e-05 1.05e-06 1.29e-06 3.78e-06 7.35e-06 2.81e-06 1.78e-06 2.7e-06 2.06e-06 2.1e-06 1.05e-06 2.28e-05 2.24e-06 3.33e-07 1.44e-06 2.49e-06 2.6e-06 7.18e-07 7.53e-07
ENSG00000134698 AGO4 -206857 1.93e-06 2.42e-06 2.16e-07 1.62e-06 4.51e-07 6.42e-07 1.25e-06 3.99e-07 1.76e-06 7.04e-07 1.89e-06 1.15e-06 2.86e-06 8.7e-07 4.72e-07 9.7e-07 1.12e-06 1.16e-06 6.7e-07 7.4e-07 6.41e-07 1.96e-06 1.63e-06 5.79e-07 2.67e-06 7.58e-07 1.02e-06 1.04e-06 1.75e-06 1.47e-06 8.55e-07 2.31e-07 3.56e-07 5.72e-07 8.31e-07 6.4e-07 6.94e-07 3.66e-07 5.16e-07 2.26e-07 2.8e-07 3.28e-06 3.67e-07 1.41e-07 3.68e-07 3.25e-07 2.43e-07 5.92e-08 2.86e-07
ENSG00000142686 C1orf216 -117735 5.11e-06 6.21e-06 8.35e-07 3.4e-06 1.63e-06 1.66e-06 5.11e-06 9.79e-07 4.86e-06 2.69e-06 6.53e-06 3.27e-06 8.85e-06 1.79e-06 1.04e-06 3.3e-06 1.92e-06 3.83e-06 1.51e-06 1.18e-06 3.02e-06 5.07e-06 4.49e-06 1.4e-06 8.15e-06 1.62e-06 2.39e-06 1.53e-06 4.46e-06 4.34e-06 2.56e-06 5.25e-07 6.32e-07 1.86e-06 1.93e-06 1.11e-06 9.64e-07 4.74e-07 1.05e-06 4.73e-07 2.08e-07 8.26e-06 3.83e-07 1.63e-07 5.77e-07 1.03e-06 8.86e-07 2.4e-07 3.29e-07
ENSG00000142687 KIAA0319L 43209 1.36e-05 2.01e-05 2.53e-06 1.01e-05 3.08e-06 6.2e-06 1.96e-05 2.99e-06 1.66e-05 7.28e-06 2e-05 8.18e-06 2.82e-05 6.95e-06 4.76e-06 9e-06 8.25e-06 1.23e-05 4.18e-06 4.17e-06 6.9e-06 1.5e-05 1.49e-05 4.02e-06 2.71e-05 4.65e-06 7.76e-06 6.54e-06 1.62e-05 1.38e-05 1.13e-05 9.65e-07 1.25e-06 3.69e-06 6.9e-06 2.82e-06 1.79e-06 2.6e-06 2.12e-06 2e-06 9.3e-07 2.17e-05 1.87e-06 2.96e-07 1.27e-06 2.35e-06 2.46e-06 7.99e-07 6.2e-07
ENSG00000142694 \N -722995 2.74e-07 1.25e-07 3.69e-08 1.81e-07 9.16e-08 9.65e-08 1.44e-07 5.33e-08 1.44e-07 4.57e-08 1.6e-07 8.14e-08 1.41e-07 6.76e-08 6.04e-08 7.17e-08 3.98e-08 1.21e-07 5.75e-08 4.1e-08 1.08e-07 1.23e-07 1.39e-07 3.42e-08 1.37e-07 1.16e-07 1.11e-07 9.65e-08 1.08e-07 1.07e-07 9.64e-08 3.54e-08 4.02e-08 8.34e-08 8.76e-08 3.2e-08 5.74e-08 9.25e-08 6.71e-08 4.55e-08 4.94e-08 1.46e-07 5.2e-08 1.26e-08 3.41e-08 1.84e-08 1.23e-07 3.78e-09 5.01e-08
ENSG00000146463 ZMYM4 332192 1.29e-06 8.5e-07 1.46e-07 3.43e-07 1.04e-07 3.15e-07 6.23e-07 1.38e-07 7.56e-07 2.98e-07 1.07e-06 4.28e-07 1.07e-06 2.14e-07 4.03e-07 2.69e-07 5.63e-07 4.31e-07 3.79e-07 3.06e-07 2.55e-07 5.37e-07 4.96e-07 2.29e-07 1.36e-06 2.56e-07 3.48e-07 3.88e-07 5.9e-07 8.51e-07 4.34e-07 4.47e-08 1.27e-07 1.88e-07 3.66e-07 2.78e-07 3.37e-07 1.13e-07 8.45e-08 1.84e-08 1.23e-07 1.41e-06 7.3e-08 5.89e-09 1.59e-07 3.54e-08 1.01e-07 2.44e-08 5.25e-08
ENSG00000171812 COL8A2 -524063 3.21e-07 1.7e-07 6.26e-08 2.36e-07 1.02e-07 8.37e-08 2.16e-07 5.43e-08 1.71e-07 8.53e-08 1.69e-07 1.19e-07 2.29e-07 8.44e-08 6.53e-08 7.89e-08 4.25e-08 1.77e-07 7.11e-08 6.02e-08 1.26e-07 1.47e-07 1.75e-07 3.42e-08 2.17e-07 1.31e-07 1.17e-07 1.28e-07 1.37e-07 1.33e-07 1.22e-07 4.75e-08 4.76e-08 9.3e-08 3.97e-08 4.6e-08 6.77e-08 7.61e-08 5.8e-08 8.06e-08 5.04e-08 2.65e-07 3.53e-08 1.43e-08 7.93e-08 6.83e-09 1e-07 2.16e-09 4.47e-08
ENSG00000196182 STK40 -784737 2.67e-07 1.16e-07 3.54e-08 1.84e-07 9.01e-08 9.87e-08 1.42e-07 5.49e-08 1.41e-07 4.4e-08 1.56e-07 7.75e-08 1.33e-07 6.38e-08 6.17e-08 7.5e-08 3.9e-08 1.14e-07 5.39e-08 4.45e-08 1.05e-07 1.27e-07 1.34e-07 4.05e-08 1.33e-07 1.14e-07 1.12e-07 9.36e-08 1.05e-07 1.1e-07 9.91e-08 3.1e-08 3.66e-08 8.68e-08 8.98e-08 3.62e-08 5.45e-08 9.22e-08 6.55e-08 3.8e-08 5.14e-08 1.33e-07 5.27e-08 1.71e-08 3.83e-08 1.83e-08 1.26e-07 3.81e-09 4.88e-08
ENSG00000239636 AC004865.2 23430 2.1e-05 2.91e-05 4.17e-06 1.39e-05 5.29e-06 1.03e-05 3.12e-05 3.93e-06 2.46e-05 1.13e-05 3.08e-05 1.44e-05 3.88e-05 1.14e-05 5.8e-06 1.26e-05 1.22e-05 2.03e-05 6.6e-06 5.45e-06 9.78e-06 2.52e-05 2.45e-05 6.27e-06 3.77e-05 5.77e-06 1.08e-05 9.67e-06 2.52e-05 2.02e-05 1.59e-05 1.65e-06 1.93e-06 5.37e-06 9.92e-06 4.46e-06 2.12e-06 3.12e-06 3.16e-06 3.17e-06 1.64e-06 3.15e-05 2.65e-06 4.29e-07 2.07e-06 3.23e-06 3.71e-06 1.28e-06 1.39e-06
ENSG00000243749 TMEM35B 615806 2.8e-07 1.36e-07 4.98e-08 2.07e-07 9.87e-08 9.91e-08 1.6e-07 5.37e-08 1.45e-07 5.67e-08 1.57e-07 9e-08 1.59e-07 7.64e-08 5.94e-08 7.36e-08 4.12e-08 1.4e-07 7.12e-08 5.04e-08 1.26e-07 1.24e-07 1.58e-07 2.91e-08 1.63e-07 1.25e-07 1.07e-07 1.04e-07 1.22e-07 9.88e-08 1.08e-07 4.47e-08 3.46e-08 8.89e-08 4.84e-08 2.74e-08 4.62e-08 8.72e-08 6.39e-08 5.35e-08 5.42e-08 1.59e-07 4.87e-08 1.18e-08 3.34e-08 1.8e-08 1.21e-07 1.92e-09 4.69e-08