Genes within 1Mb (chr1:35553423:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000054116 TRAPPC3 -602630 eQTL 4.50e-05 -0.0449 0.011 0.0 0.0 0.481
ENSG00000092850 TEKT2 -530671 eQTL 5.37e-35 -0.498 0.0387 0.0 0.0 0.481
ENSG00000116544 DLGAP3 623773 eQTL 1.71e-02 -0.0545 0.0228 0.0 0.0 0.481
ENSG00000116560 SFPQ 360278 eQTL 1.37e-04 0.0416 0.0109 0.00192 0.00143 0.481
ENSG00000116819 TFAP2E -19891 eQTL 5.45e-05 0.0978 0.0241 0.0 0.0 0.481
ENSG00000116863 ADPRHL2 -535469 eQTL 1.64e-02 -0.0334 0.0139 0.0 0.0 0.481
ENSG00000119535 CSF3R -929855 pQTL 1.30e-03 -0.0702 0.0218 0.0 0.0 0.479
ENSG00000126067 PSMB2 -88103 eQTL 8.44e-04 0.0378 0.0113 0.0 0.0 0.481
ENSG00000134698 AGO4 -254593 eQTL 9.96e-06 -0.0376 0.00847 0.0 0.0 0.481
ENSG00000142686 C1orf216 -165471 eQTL 1.45e-28 -0.191 0.0166 0.0 0.0 0.481
ENSG00000142687 KIAA0319L -4527 eQTL 1.28e-04 0.0426 0.0111 0.0 0.0 0.481
ENSG00000146463 ZMYM4 284456 eQTL 4.69e-05 -0.0624 0.0152 0.0 0.0 0.481
ENSG00000163867 ZMYM6 521478 eQTL 1.35e-03 0.0447 0.0139 0.0 0.0 0.481
ENSG00000171812 COL8A2 -571799 eQTL 3.86e-06 0.102 0.022 0.0 0.0 0.481
ENSG00000196182 STK40 -832473 eQTL 6.94e-05 -0.038 0.00952 0.00213 0.00128 0.481
ENSG00000197056 ZMYM1 521251 eQTL 7.32e-04 -0.0531 0.0157 0.0 0.0 0.481
ENSG00000239636 AC004865.2 -24306 eQTL 2.54e-201 -0.711 0.0181 0.0 0.0502 0.481
ENSG00000243749 TMEM35B 568070 eQTL 1.36e-26 -0.164 0.0149 0.0 0.0 0.481


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000054116 TRAPPC3 -602630 1.26e-06 3.35e-07 3.05e-07 1.07e-06 1.02e-07 2.24e-07 5.28e-07 5.56e-08 2.78e-07 2.16e-07 2.84e-07 2.09e-07 5.81e-07 1.1e-07 2.07e-07 1.92e-07 4.45e-08 3.56e-07 2.17e-07 2.25e-07 1.91e-07 2.51e-07 3.7e-07 1.13e-07 5.75e-07 1.86e-07 1.85e-07 2.69e-07 2.76e-07 1.33e-07 2.31e-07 5.08e-08 4.77e-08 6.17e-07 5.93e-07 4.67e-07 1.93e-07 1.14e-07 7.63e-08 2.65e-08 2.23e-07 3.55e-07 7.72e-08 1.88e-08 3.4e-08 4.43e-08 7.97e-08 4.47e-08 4.94e-08
ENSG00000092850 TEKT2 -530671 1.3e-06 5.6e-07 2.74e-07 1.33e-06 1.03e-07 3.24e-07 6.29e-07 6.57e-08 4.43e-07 2.81e-07 4.64e-07 3.36e-07 8.34e-07 1.54e-07 3.13e-07 2.85e-07 5.73e-08 4.22e-07 3.01e-07 4.06e-07 2.52e-07 3.76e-07 4.66e-07 1.78e-07 8.62e-07 2.36e-07 2.58e-07 3.95e-07 4.13e-07 1.89e-07 3.56e-07 7.6e-08 1.31e-07 9.68e-07 5.64e-07 5e-07 3.65e-07 1.55e-07 1.46e-07 8.15e-09 4.41e-07 5.79e-07 9.66e-08 1.06e-08 3.32e-08 8.83e-08 9.23e-08 8.51e-08 4.61e-08
ENSG00000116560 SFPQ 360278 1.99e-06 9.53e-07 3.2e-07 2e-06 9.9e-08 6.46e-07 1.53e-06 2.62e-07 1.41e-06 4.78e-07 1.35e-06 6.01e-07 2e-06 2.79e-07 5.4e-07 9.57e-07 5.27e-07 7.72e-07 7.7e-07 4.5e-07 8.13e-07 1.35e-06 1.05e-06 6.31e-07 2.1e-06 3.91e-07 6.91e-07 9.25e-07 1.31e-06 8.63e-07 7.26e-07 3.67e-08 3.25e-07 1.83e-06 1.02e-06 1.01e-06 7.14e-07 3.65e-07 5.05e-07 3.23e-07 7.36e-07 1.49e-06 5.89e-07 2.64e-08 9.95e-08 2.93e-07 1.18e-07 1.41e-07 5.18e-08
ENSG00000116819 TFAP2E -19891 3.49e-05 3.25e-05 5.33e-06 1.51e-05 4.31e-06 1.39e-05 4.17e-05 4.28e-06 3.01e-05 1.39e-05 3.66e-05 1.5e-05 4.74e-05 1.32e-05 6.08e-06 1.63e-05 1.56e-05 2.21e-05 6.61e-06 6.34e-06 1.34e-05 2.83e-05 2.86e-05 7.87e-06 3.77e-05 6.74e-06 1.3e-05 1.24e-05 2.85e-05 2.13e-05 1.73e-05 1.59e-06 2.6e-06 6.95e-06 1.12e-05 5.31e-06 2.93e-06 2.99e-06 4.46e-06 3.28e-06 1.73e-06 3.56e-05 3.64e-06 2.85e-07 2.12e-06 3.32e-06 3.64e-06 1.48e-06 1.52e-06
ENSG00000134698 AGO4 -254593 4.74e-06 2.44e-06 8.72e-07 3.18e-06 3.71e-07 7.84e-07 1.98e-06 3.99e-07 1.74e-06 8.05e-07 1.79e-06 1.43e-06 3.04e-06 1.22e-06 5.03e-07 1.96e-06 9.05e-07 2.24e-06 1.13e-06 1.26e-06 1.4e-06 2.44e-06 2.61e-06 1.08e-06 2.69e-06 1.2e-06 1.01e-06 1.84e-06 1.92e-06 1.3e-06 1.8e-06 2.57e-07 6.26e-07 1.83e-06 1.94e-06 1.14e-06 8.38e-07 4.74e-07 1.2e-06 1.86e-07 8.99e-07 2.83e-06 4.37e-07 1.06e-07 1.93e-07 3.57e-07 2.29e-07 2.34e-07 1.35e-07
ENSG00000142686 C1orf216 -165471 8.64e-06 5.68e-06 1e-06 4.85e-06 6.12e-07 1.76e-06 6.45e-06 8.83e-07 5.13e-06 2.46e-06 5.26e-06 3.36e-06 7.26e-06 1.97e-06 1.41e-06 4.07e-06 1.75e-06 3.83e-06 1.47e-06 1.19e-06 2.66e-06 4.9e-06 4.77e-06 1.68e-06 5.99e-06 1.96e-06 2.43e-06 1.71e-06 4.38e-06 3.11e-06 2.74e-06 3.97e-07 7.99e-07 3.01e-06 2.1e-06 2.04e-06 1.08e-06 5.57e-07 8.5e-07 3.61e-07 1.04e-06 6.04e-06 1.37e-06 1.95e-07 3.62e-07 1.05e-06 8.03e-07 2.07e-07 2.86e-07
ENSG00000142694 \N -770731 7.57e-07 1.67e-07 1.23e-07 3.55e-07 9.25e-08 1.28e-07 3.25e-07 5.4e-08 1.85e-07 1.11e-07 1.63e-07 1.2e-07 2.94e-07 8.66e-08 7.79e-08 9.6e-08 4.17e-08 2.33e-07 8.93e-08 8.25e-08 1.23e-07 1.65e-07 2.04e-07 3.68e-08 2.74e-07 1.22e-07 1.23e-07 1.7e-07 1.36e-07 1.05e-07 1.27e-07 3.39e-08 5.53e-08 6.95e-07 3.4e-07 2.04e-07 1.03e-07 6e-08 4.44e-08 8.03e-08 3.16e-07 1.62e-07 2.88e-08 1.08e-08 5.59e-08 1.81e-08 1.21e-07 2.94e-09 4.94e-08
ENSG00000171812 COL8A2 -571799 1.21e-06 4.63e-07 3.31e-07 1.16e-06 1.07e-07 2.86e-07 5.82e-07 5.78e-08 3.51e-07 2.37e-07 3.32e-07 2.49e-07 6.77e-07 1.41e-07 2.48e-07 2.18e-07 4.63e-08 3.82e-07 2.65e-07 2.86e-07 1.92e-07 2.96e-07 4e-07 1.29e-07 6.87e-07 2.01e-07 2.23e-07 3.24e-07 3.43e-07 1.46e-07 2.73e-07 6.04e-08 8.37e-08 7.25e-07 5.2e-07 4.44e-07 2.83e-07 1.14e-07 1.23e-07 2.17e-08 2.92e-07 4.35e-07 6.65e-08 1.98e-08 3.41e-08 7.03e-08 7.13e-08 8.16e-08 4.72e-08
ENSG00000197056 ZMYM1 521251 1.25e-06 6.09e-07 2.56e-07 1.26e-06 1.02e-07 3.18e-07 6.54e-07 6.72e-08 4.74e-07 2.88e-07 4.88e-07 3.5e-07 8.6e-07 1.57e-07 3.16e-07 2.89e-07 6.17e-08 4.33e-07 3.26e-07 4.25e-07 2.38e-07 3.87e-07 4.69e-07 1.91e-07 9.15e-07 2.46e-07 2.62e-07 4.11e-07 4.22e-07 2.02e-07 3.66e-07 7.4e-08 1.36e-07 1.08e-06 5.15e-07 4.82e-07 4.16e-07 1.51e-07 1.5e-07 8.36e-09 4.53e-07 5.96e-07 1.22e-07 1.62e-08 3.55e-08 9.94e-08 9.26e-08 8.74e-08 4.52e-08
ENSG00000239636 AC004865.2 -24306 3.54e-05 3.25e-05 5.11e-06 1.48e-05 3.6e-06 1.37e-05 3.97e-05 3.9e-06 2.79e-05 1.31e-05 3.39e-05 1.31e-05 4.54e-05 1.24e-05 5.8e-06 1.51e-05 1.47e-05 1.98e-05 5.89e-06 5.81e-06 1.24e-05 2.59e-05 2.73e-05 7.45e-06 3.56e-05 6.12e-06 1.19e-05 1.17e-05 2.71e-05 1.95e-05 1.61e-05 1.6e-06 2.61e-06 6.84e-06 1.06e-05 5.11e-06 2.73e-06 2.97e-06 4.16e-06 3.14e-06 1.72e-06 3.54e-05 3.58e-06 2.71e-07 1.98e-06 2.87e-06 3.42e-06 1.5e-06 1.39e-06
ENSG00000243749 TMEM35B 568070 1.2e-06 4.63e-07 3.45e-07 1.17e-06 1.1e-07 2.95e-07 5.8e-07 6.12e-08 3.62e-07 2.37e-07 3.47e-07 2.55e-07 6.98e-07 1.49e-07 2.57e-07 2.1e-07 4.63e-08 3.74e-07 2.57e-07 3.09e-07 1.92e-07 2.99e-07 4.12e-07 1.25e-07 6.87e-07 2.07e-07 2.22e-07 3.24e-07 3.43e-07 1.58e-07 2.83e-07 6.58e-08 9.26e-08 7.27e-07 5.21e-07 4.49e-07 2.96e-07 1.21e-07 1.41e-07 2.2e-08 3.06e-07 4.42e-07 5.73e-08 2e-08 3.2e-08 7.16e-08 7.13e-08 8.25e-08 4.97e-08