Genes within 1Mb (chr1:35545705:G:A):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000020129 NCDN -11768 sc-eQTL 9.02e-01 0.031 0.252 0.052 gdT L2
ENSG00000054116 TRAPPC3 -610348 sc-eQTL 9.20e-01 0.022 0.219 0.052 gdT L2
ENSG00000054118 THRAP3 -678727 sc-eQTL 1.76e-01 0.345 0.253 0.052 gdT L2
ENSG00000092847 AGO1 -324103 sc-eQTL 1.54e-01 -0.381 0.266 0.052 gdT L2
ENSG00000092853 CLSPN -224273 sc-eQTL 5.57e-01 -0.123 0.209 0.052 gdT L2
ENSG00000116544 DLGAP3 616055 sc-eQTL 8.93e-01 0.0331 0.245 0.052 gdT L2
ENSG00000116560 SFPQ 352560 sc-eQTL 1.48e-01 -0.233 0.16 0.052 gdT L2
ENSG00000116863 ADPRHL2 -543187 sc-eQTL 5.23e-01 0.158 0.246 0.052 gdT L2
ENSG00000116871 MAP7D1 -609874 sc-eQTL 5.65e-01 0.121 0.21 0.052 gdT L2
ENSG00000116898 MRPS15 -918679 sc-eQTL 9.86e-01 0.00448 0.257 0.052 gdT L2
ENSG00000126067 PSMB2 -95821 sc-eQTL 4.00e-01 0.191 0.226 0.052 gdT L2
ENSG00000126070 AGO3 -385013 sc-eQTL 2.02e-01 0.313 0.244 0.052 gdT L2
ENSG00000134698 AGO4 -262311 sc-eQTL 4.46e-01 0.183 0.239 0.052 gdT L2
ENSG00000142686 C1orf216 -173189 sc-eQTL 7.96e-01 -0.063 0.244 0.052 gdT L2
ENSG00000142687 KIAA0319L -12245 sc-eQTL 1.70e-01 -0.336 0.243 0.052 gdT L2
ENSG00000142694 EVA1B -778449 sc-eQTL 2.46e-01 -0.269 0.231 0.052 gdT L2
ENSG00000146463 ZMYM4 276996 sc-eQTL 4.32e-01 0.186 0.236 0.052 gdT L2
ENSG00000163866 SMIM12 685950 sc-eQTL 5.26e-01 -0.162 0.255 0.052 gdT L2
ENSG00000163867 ZMYM6 513760 sc-eQTL 2.97e-02 0.572 0.26 0.052 gdT L2
ENSG00000181817 LSM10 -852203 sc-eQTL 7.59e-01 0.0721 0.235 0.052 gdT L2
ENSG00000196182 STK40 -840191 sc-eQTL 3.15e-01 -0.224 0.222 0.052 gdT L2
ENSG00000197056 ZMYM1 513533 sc-eQTL 5.47e-01 0.143 0.237 0.052 gdT L2
ENSG00000227409 ZMYM4-AS1 179628 sc-eQTL 1.96e-01 -0.291 0.224 0.052 gdT L2
ENSG00000239636 AC004865.2 -32024 sc-eQTL 1.77e-01 0.296 0.218 0.052 gdT L2
ENSG00000243749 TMEM35B 560352 sc-eQTL 7.11e-02 -0.337 0.186 0.052 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000054116 TRAPPC3 -610348 eQTL 0.00726 0.0688 0.0256 0.0 0.0 0.0476
ENSG00000126067 PSMB2 -95821 eQTL 2.65e-19 -0.232 0.0253 0.0 0.0 0.0476
ENSG00000142686 C1orf216 -173189 eQTL 0.107 0.0665 0.0412 0.00114 0.0 0.0476
ENSG00000171812 COL8A2 -579517 eQTL 0.0303 -0.112 0.0515 0.0 0.0 0.0476
ENSG00000239636 AC004865.2 -32024 eQTL 0.000261 0.248 0.0676 0.00218 0.0 0.0476
ENSG00000243749 TMEM35B 560352 eQTL 0.000806 0.123 0.0365 0.0 0.0 0.0476


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000054118 \N -678727 2.77e-07 1.36e-07 4.69e-08 1.9e-07 9.24e-08 9.91e-08 1.6e-07 5.43e-08 1.45e-07 5.67e-08 1.67e-07 1.05e-07 1.71e-07 7.37e-08 6.12e-08 7.49e-08 4.09e-08 1.4e-07 7.12e-08 4.31e-08 1.21e-07 1.24e-07 1.45e-07 2.79e-08 1.55e-07 1.21e-07 1.07e-07 9.74e-08 1.2e-07 9.88e-08 1.08e-07 2.9e-08 3.73e-08 8.11e-08 7.36e-08 3.49e-08 5.74e-08 9.25e-08 6.86e-08 4.19e-08 3.59e-08 1.5e-07 5.2e-08 7.32e-09 2.82e-08 1.84e-08 1.22e-07 3.78e-09 4.83e-08
ENSG00000126067 PSMB2 -95821 4.54e-06 4.99e-06 5.59e-07 2.1e-06 8.7e-07 1.19e-06 4.08e-06 1.01e-06 4.26e-06 1.91e-06 5.21e-06 3.41e-06 7.06e-06 2.3e-06 1.42e-06 2.42e-06 2.05e-06 2.72e-06 1.33e-06 8.96e-07 2.02e-06 4.23e-06 3.46e-06 1.81e-06 5.16e-06 1.25e-06 2.21e-06 1.43e-06 4.18e-06 4.02e-06 2.53e-06 3.98e-07 7.93e-07 1.61e-06 2.08e-06 9.54e-07 9.07e-07 3.93e-07 1.31e-06 3.64e-07 2.87e-07 5.76e-06 3.63e-07 1.85e-07 3.47e-07 3.51e-07 8.93e-07 2.32e-07 1.57e-07
ENSG00000171812 COL8A2 -579517 3.1e-07 1.59e-07 5.64e-08 2.15e-07 1.03e-07 8.45e-08 1.99e-07 5.75e-08 1.44e-07 7.6e-08 1.76e-07 1.22e-07 2.38e-07 8e-08 5.94e-08 7.98e-08 4.18e-08 1.72e-07 7.36e-08 4.95e-08 1.27e-07 1.42e-07 1.58e-07 3.58e-08 1.85e-07 1.23e-07 1.12e-07 1.12e-07 1.31e-07 1.24e-07 1.21e-07 3.6e-08 3.38e-08 9.3e-08 3.81e-08 2.95e-08 4.07e-08 8.61e-08 6.3e-08 5.13e-08 5.14e-08 1.62e-07 4.87e-08 1.71e-08 3.3e-08 1.77e-08 1.2e-07 1.92e-09 4.97e-08
ENSG00000196182 \N -840191 2.74e-07 1.25e-07 3.72e-08 1.82e-07 9.01e-08 9.65e-08 1.44e-07 5.33e-08 1.41e-07 4.57e-08 1.57e-07 8.59e-08 1.45e-07 6.56e-08 6e-08 7.37e-08 3.94e-08 1.21e-07 5.75e-08 4.07e-08 1.04e-07 1.23e-07 1.32e-07 3.42e-08 1.32e-07 1.16e-07 1.11e-07 9.36e-08 1.05e-07 1.07e-07 9.64e-08 4.09e-08 3.16e-08 8.49e-08 8.98e-08 3.76e-08 4.99e-08 9.68e-08 6.78e-08 3.98e-08 4.83e-08 1.33e-07 4.52e-08 1.11e-08 4.7e-08 1.66e-08 1.23e-07 3.92e-09 5.04e-08
ENSG00000241014 \N 566999 3.21e-07 1.7e-07 5.72e-08 2.22e-07 1.03e-07 8.33e-08 2.1e-07 5.85e-08 1.54e-07 8.53e-08 1.83e-07 1.23e-07 2.38e-07 8e-08 5.69e-08 8.08e-08 4.31e-08 1.77e-07 7.42e-08 5.07e-08 1.22e-07 1.47e-07 1.62e-07 3.51e-08 1.98e-07 1.26e-07 1.17e-07 1.1e-07 1.34e-07 1.29e-07 1.26e-07 3.72e-08 3.46e-08 9.52e-08 3.4e-08 3.22e-08 4.54e-08 8.72e-08 6.28e-08 5.35e-08 5.43e-08 1.64e-07 4.76e-08 1.74e-08 3.61e-08 1.8e-08 1.11e-07 1.93e-09 4.83e-08
ENSG00000243749 TMEM35B 560352 3.27e-07 1.67e-07 5.82e-08 2.24e-07 1.03e-07 8.37e-08 2.1e-07 5.85e-08 1.54e-07 8.53e-08 1.86e-07 1.31e-07 2.45e-07 8.07e-08 5.69e-08 8.08e-08 4.45e-08 1.8e-07 7.27e-08 5.2e-08 1.22e-07 1.47e-07 1.62e-07 3.59e-08 2.02e-07 1.26e-07 1.17e-07 1.1e-07 1.31e-07 1.33e-07 1.22e-07 3.78e-08 3.56e-08 9.76e-08 2.97e-08 3.07e-08 4.62e-08 8.63e-08 6.39e-08 5.45e-08 5.45e-08 1.68e-07 4.76e-08 1.76e-08 3.66e-08 1.65e-08 1.11e-07 1.95e-09 4.68e-08