Genes within 1Mb (chr1:35545483:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000054116 TRAPPC3 -610570 eQTL 4.49e-05 -0.0449 0.011 0.0 0.0 0.481
ENSG00000092850 TEKT2 -538611 eQTL 5.39e-35 -0.498 0.0387 0.0 0.0 0.481
ENSG00000116544 DLGAP3 615833 eQTL 1.71e-02 -0.0545 0.0228 0.0 0.0 0.481
ENSG00000116560 SFPQ 352338 eQTL 1.37e-04 0.0416 0.0109 0.00192 0.00143 0.481
ENSG00000116819 TFAP2E -27831 eQTL 5.44e-05 0.0978 0.0241 0.0 0.0 0.481
ENSG00000116863 ADPRHL2 -543409 eQTL 1.64e-02 -0.0334 0.0139 0.0 0.0 0.481
ENSG00000119535 CSF3R -937795 pQTL 1.30e-03 -0.0701 0.0218 0.0 0.0 0.479
ENSG00000126067 PSMB2 -96043 eQTL 8.42e-04 0.0379 0.0113 0.0 0.0 0.481
ENSG00000134698 AGO4 -262533 eQTL 9.95e-06 -0.0376 0.00847 0.0 0.0 0.481
ENSG00000142686 C1orf216 -173411 eQTL 1.45e-28 -0.191 0.0166 0.0 0.0 0.481
ENSG00000142687 KIAA0319L -12467 eQTL 1.28e-04 0.0427 0.0111 0.0 0.0 0.481
ENSG00000146463 ZMYM4 276516 eQTL 4.69e-05 -0.0624 0.0152 0.0 0.0 0.481
ENSG00000163867 ZMYM6 513538 eQTL 1.35e-03 0.0447 0.0139 0.0 0.0 0.481
ENSG00000171812 COL8A2 -579739 eQTL 3.88e-06 0.102 0.022 0.0 0.0 0.481
ENSG00000196182 STK40 -840413 eQTL 6.93e-05 -0.038 0.00952 0.00213 0.00128 0.481
ENSG00000197056 ZMYM1 513311 eQTL 7.31e-04 -0.0531 0.0157 0.0 0.0 0.481
ENSG00000239636 AC004865.2 -32246 eQTL 2.63e-201 -0.711 0.0181 0.0 0.0496 0.481
ENSG00000243749 TMEM35B 560130 eQTL 1.37e-26 -0.164 0.0149 0.0 0.0 0.481


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000054116 TRAPPC3 -610570 5.85e-07 3.47e-07 9.49e-08 3.58e-07 1.05e-07 1.64e-07 4.14e-07 9.91e-08 3.17e-07 2.06e-07 4.74e-07 2.98e-07 5.39e-07 1.07e-07 1.26e-07 1.61e-07 1.73e-07 3.02e-07 1.56e-07 8.25e-08 1.91e-07 2.7e-07 2.63e-07 9.63e-08 5.75e-07 2.32e-07 1.97e-07 1.95e-07 2.31e-07 3.8e-07 2.11e-07 8.02e-08 5.53e-08 1.24e-07 2.35e-07 5.7e-08 9.9e-08 7.53e-08 4.11e-08 7.28e-08 2.78e-08 2.91e-07 2.75e-08 5.58e-09 9.64e-08 1.37e-08 9.46e-08 3.3e-09 5.54e-08
ENSG00000092850 TEKT2 -538611 8.21e-07 5.74e-07 1.29e-07 4.26e-07 9.26e-08 2.24e-07 5.49e-07 1.54e-07 5.02e-07 2.72e-07 8.15e-07 3.91e-07 7.71e-07 1.48e-07 2.14e-07 2.36e-07 3.69e-07 3.74e-07 2.42e-07 1.55e-07 2.17e-07 3.8e-07 3.45e-07 1.44e-07 8.99e-07 2.54e-07 2.72e-07 2.71e-07 3.83e-07 6.19e-07 3.32e-07 6.13e-08 4.74e-08 1.36e-07 3.34e-07 8.32e-08 8.35e-08 1.02e-07 6.58e-08 3.12e-08 7.16e-08 4.95e-07 4.71e-08 1.26e-08 1.34e-07 1.33e-08 1.17e-07 2.25e-08 6.03e-08
ENSG00000116560 SFPQ 352338 1.29e-06 9.79e-07 3.12e-07 1.15e-06 2.98e-07 5.88e-07 1.58e-06 3.98e-07 1.49e-06 5.98e-07 1.83e-06 7.43e-07 2.16e-06 2.79e-07 5.5e-07 8.79e-07 9.33e-07 6.8e-07 8.01e-07 6.97e-07 6.81e-07 1.42e-06 8.89e-07 6.21e-07 2.19e-06 4.39e-07 9.05e-07 7.19e-07 1.28e-06 1.32e-06 6.68e-07 1.73e-07 2.19e-07 6.38e-07 5.6e-07 4.5e-07 5.04e-07 2.46e-07 3.76e-07 2.49e-07 2.89e-07 1.46e-06 1.14e-07 1.31e-07 1.69e-07 1.25e-07 2.2e-07 5.45e-08 1.11e-07
ENSG00000116819 TFAP2E -27831 1.55e-05 2.11e-05 3.08e-06 1.13e-05 3.08e-06 7.88e-06 2.32e-05 3.39e-06 1.78e-05 9.13e-06 2.37e-05 9.41e-06 3.19e-05 7.98e-06 5.16e-06 1.03e-05 9.2e-06 1.49e-05 4.67e-06 4.32e-06 8.43e-06 1.79e-05 1.8e-05 5.15e-06 2.94e-05 5.34e-06 8.03e-06 7.78e-06 1.79e-05 1.67e-05 1.25e-05 1.19e-06 1.49e-06 4.49e-06 8.41e-06 4.07e-06 1.91e-06 2.71e-06 3.21e-06 2.17e-06 1.36e-06 2.41e-05 2.69e-06 2.66e-07 1.43e-06 2.79e-06 3.07e-06 1.16e-06 9.71e-07
ENSG00000134698 AGO4 -262533 1.89e-06 2.37e-06 2.86e-07 1.58e-06 5.07e-07 7.28e-07 1.32e-06 5.85e-07 1.61e-06 7.73e-07 1.93e-06 1.48e-06 3.08e-06 8.74e-07 4.02e-07 1.17e-06 1.03e-06 1.33e-06 5.7e-07 7.26e-07 6.36e-07 1.94e-06 1.56e-06 8.29e-07 2.61e-06 1.1e-06 1.1e-06 1.15e-06 1.73e-06 1.66e-06 9.62e-07 2.83e-07 3.56e-07 6.66e-07 9.04e-07 6.2e-07 6.6e-07 3.94e-07 6.21e-07 2.29e-07 3.56e-07 2.7e-06 3.95e-07 2.06e-07 3.79e-07 3.28e-07 4.11e-07 2.44e-07 2.71e-07
ENSG00000142686 C1orf216 -173411 4.34e-06 4.68e-06 6.95e-07 2.43e-06 8.7e-07 1.19e-06 2.91e-06 9.94e-07 4.2e-06 2.07e-06 4.71e-06 3.36e-06 6.77e-06 1.96e-06 1.26e-06 2.48e-06 1.86e-06 2.68e-06 1.42e-06 8.79e-07 2.05e-06 4.07e-06 3.54e-06 1.88e-06 5.18e-06 1.32e-06 2.35e-06 1.48e-06 3.8e-06 3.38e-06 2.12e-06 5.08e-07 6.09e-07 1.68e-06 2.04e-06 9.06e-07 9.39e-07 4.93e-07 1.28e-06 3.63e-07 2.22e-07 4.9e-06 3.81e-07 1.85e-07 3.81e-07 3.23e-07 7.44e-07 2.26e-07 1.77e-07
ENSG00000142694 \N -778671 3.14e-07 1.67e-07 6.45e-08 2.28e-07 1.02e-07 8.85e-08 2.4e-07 5.84e-08 1.86e-07 1.11e-07 1.96e-07 1.46e-07 2.38e-07 8.44e-08 5.97e-08 9.6e-08 5.42e-08 1.91e-07 7.27e-08 6.03e-08 1.27e-07 1.76e-07 1.68e-07 3.59e-08 2.48e-07 1.51e-07 1.29e-07 1.28e-07 1.39e-07 1.46e-07 1.26e-07 4.47e-08 3.65e-08 9.58e-08 5.24e-08 3.11e-08 4.84e-08 6.32e-08 5.59e-08 5.96e-08 5.87e-08 1.6e-07 3.18e-08 1.7e-08 3.34e-08 6.68e-09 7.26e-08 0.0 4.97e-08
ENSG00000171812 COL8A2 -579739 6.97e-07 4.78e-07 1.05e-07 3.57e-07 1.1e-07 1.77e-07 4.93e-07 1.21e-07 3.82e-07 2.28e-07 5.93e-07 3.36e-07 6.08e-07 1.1e-07 1.51e-07 1.96e-07 2.48e-07 3.44e-07 1.81e-07 1.24e-07 1.92e-07 3.1e-07 3.02e-07 1.19e-07 6.87e-07 2.4e-07 2.43e-07 2.19e-07 2.78e-07 4.61e-07 2.55e-07 7.4e-08 5.73e-08 1.19e-07 2.85e-07 6.73e-08 1.15e-07 9.46e-08 5.67e-08 5.96e-08 4.32e-08 3.73e-07 3.55e-08 5.87e-09 1.19e-07 1.91e-08 8.13e-08 1.15e-08 5.15e-08
ENSG00000197056 ZMYM1 513311 8.7e-07 6.46e-07 1.23e-07 4.4e-07 9.16e-08 2.67e-07 5.9e-07 1.78e-07 6.18e-07 2.98e-07 9.47e-07 4.55e-07 9.23e-07 1.54e-07 2.77e-07 2.89e-07 4.73e-07 4.07e-07 2.57e-07 1.78e-07 2.38e-07 4.38e-07 3.84e-07 1.78e-07 1.13e-06 2.71e-07 3.37e-07 2.83e-07 4.15e-07 6.98e-07 3.66e-07 6.7e-08 5.31e-08 1.5e-07 3.34e-07 1.21e-07 1.12e-07 1.24e-07 7.9e-08 2.74e-08 8.55e-08 5.96e-07 5.78e-08 1.93e-08 1.58e-07 1.48e-08 1.23e-07 2.48e-08 6.26e-08
ENSG00000239636 AC004865.2 -32246 1.46e-05 1.87e-05 2.97e-06 1.02e-05 2.85e-06 6.95e-06 2.09e-05 3.25e-06 1.67e-05 8.5e-06 2.11e-05 8.6e-06 2.93e-05 7.21e-06 5.07e-06 9.61e-06 8.33e-06 1.32e-05 4.21e-06 4.13e-06 7.79e-06 1.6e-05 1.64e-05 4.82e-06 2.73e-05 5.31e-06 7.98e-06 6.92e-06 1.65e-05 1.54e-05 1.16e-05 9.89e-07 1.44e-06 4.04e-06 7.58e-06 3.76e-06 1.79e-06 2.64e-06 2.84e-06 2e-06 1.21e-06 2.17e-05 2.48e-06 2.5e-07 1.15e-06 2.56e-06 2.74e-06 8.91e-07 7.09e-07
ENSG00000243749 TMEM35B 560130 7.74e-07 5.18e-07 1.04e-07 3.92e-07 1.06e-07 2.09e-07 5.28e-07 1.4e-07 4.26e-07 2.37e-07 6.88e-07 3.68e-07 6.98e-07 1.34e-07 1.71e-07 2.14e-07 3.13e-07 3.67e-07 2.12e-07 1.39e-07 2.01e-07 3.49e-07 3.11e-07 1.27e-07 7.71e-07 2.4e-07 2.58e-07 2.54e-07 3.27e-07 5.36e-07 2.83e-07 7.41e-08 5.77e-08 1.23e-07 3e-07 8.17e-08 1.09e-07 1.06e-07 6.63e-08 5.77e-08 4.63e-08 4.16e-07 4.36e-08 1.22e-08 1.23e-07 1.22e-08 1.03e-07 1.24e-08 5.19e-08