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Genes within 1Mb (chr1:35363162:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000020129 NCDN -194311 sc-eQTL 3.28e-02 0.437 0.203 0.052 CD4_CTL L2
ENSG00000054116 TRAPPC3 -792891 sc-eQTL 7.10e-01 0.0703 0.188 0.052 CD4_CTL L2
ENSG00000054118 THRAP3 -861270 sc-eQTL 6.05e-01 0.0993 0.192 0.052 CD4_CTL L2
ENSG00000092847 AGO1 -506646 sc-eQTL 3.11e-01 0.212 0.209 0.052 CD4_CTL L2
ENSG00000116544 DLGAP3 433512 sc-eQTL 8.95e-01 -0.0251 0.191 0.052 CD4_CTL L2
ENSG00000116560 SFPQ 170017 sc-eQTL 2.78e-01 0.149 0.137 0.052 CD4_CTL L2
ENSG00000116863 ADPRHL2 -725730 sc-eQTL 8.02e-01 -0.0516 0.205 0.052 CD4_CTL L2
ENSG00000116871 MAP7D1 -792417 sc-eQTL 2.18e-01 -0.205 0.166 0.052 CD4_CTL L2
ENSG00000126067 PSMB2 -278364 sc-eQTL 7.49e-01 0.0627 0.195 0.052 CD4_CTL L2
ENSG00000126070 AGO3 -567556 sc-eQTL 2.18e-01 0.246 0.199 0.052 CD4_CTL L2
ENSG00000134698 AGO4 -444854 sc-eQTL 9.80e-01 -0.00464 0.185 0.052 CD4_CTL L2
ENSG00000142686 C1orf216 -355732 sc-eQTL 2.13e-01 -0.234 0.188 0.052 CD4_CTL L2
ENSG00000142687 KIAA0319L -194788 sc-eQTL 3.71e-01 -0.187 0.209 0.052 CD4_CTL L2
ENSG00000142694 EVA1B -960992 sc-eQTL 7.03e-01 0.0695 0.182 0.052 CD4_CTL L2
ENSG00000146463 ZMYM4 94453 sc-eQTL 7.15e-01 -0.0758 0.207 0.052 CD4_CTL L2
ENSG00000163866 SMIM12 503407 sc-eQTL 3.59e-01 0.179 0.195 0.052 CD4_CTL L2
ENSG00000163867 ZMYM6 331217 sc-eQTL 5.52e-02 0.405 0.21 0.052 CD4_CTL L2
ENSG00000197056 ZMYM1 330990 sc-eQTL 8.99e-01 -0.0272 0.214 0.052 CD4_CTL L2
ENSG00000227409 ZMYM4-AS1 -2915 sc-eQTL 3.95e-01 -0.164 0.192 0.052 CD4_CTL L2
ENSG00000239636 AC004865.2 -214567 sc-eQTL 6.04e-01 -0.0995 0.191 0.052 CD4_CTL L2
ENSG00000243749 TMEM35B 377809 sc-eQTL 6.16e-01 0.0813 0.162 0.052 CD4_CTL L2
ENSG00000020129 NCDN -194311 sc-eQTL 6.38e-01 -0.0978 0.208 0.051 CD8_TCM L2
ENSG00000054116 TRAPPC3 -792891 sc-eQTL 7.29e-01 0.0687 0.198 0.051 CD8_TCM L2
ENSG00000054118 THRAP3 -861270 sc-eQTL 5.47e-02 0.372 0.193 0.051 CD8_TCM L2
ENSG00000092847 AGO1 -506646 sc-eQTL 1.30e-01 -0.302 0.198 0.051 CD8_TCM L2
ENSG00000116544 DLGAP3 433512 sc-eQTL 8.07e-01 0.05 0.204 0.051 CD8_TCM L2
ENSG00000116560 SFPQ 170017 sc-eQTL 8.90e-01 0.0161 0.116 0.051 CD8_TCM L2
ENSG00000116863 ADPRHL2 -725730 sc-eQTL 1.55e-01 0.304 0.213 0.051 CD8_TCM L2
ENSG00000116871 MAP7D1 -792417 sc-eQTL 9.72e-01 -0.00564 0.158 0.051 CD8_TCM L2
ENSG00000126067 PSMB2 -278364 sc-eQTL 7.04e-01 -0.0741 0.195 0.051 CD8_TCM L2
ENSG00000126070 AGO3 -567556 sc-eQTL 2.10e-02 0.465 0.2 0.051 CD8_TCM L2
ENSG00000134698 AGO4 -444854 sc-eQTL 9.46e-01 -0.0141 0.208 0.051 CD8_TCM L2
ENSG00000142686 C1orf216 -355732 sc-eQTL 2.64e-01 0.216 0.193 0.051 CD8_TCM L2
ENSG00000142687 KIAA0319L -194788 sc-eQTL 5.60e-01 -0.109 0.187 0.051 CD8_TCM L2
ENSG00000142694 EVA1B -960992 sc-eQTL 3.52e-01 0.177 0.189 0.051 CD8_TCM L2
ENSG00000146463 ZMYM4 94453 sc-eQTL 2.62e-01 0.225 0.2 0.051 CD8_TCM L2
ENSG00000163866 SMIM12 503407 sc-eQTL 2.46e-01 -0.231 0.198 0.051 CD8_TCM L2
ENSG00000163867 ZMYM6 331217 sc-eQTL 8.75e-01 -0.0344 0.218 0.051 CD8_TCM L2
ENSG00000197056 ZMYM1 330990 sc-eQTL 2.01e-01 0.255 0.199 0.051 CD8_TCM L2
ENSG00000227409 ZMYM4-AS1 -2915 sc-eQTL 8.56e-01 0.0342 0.189 0.051 CD8_TCM L2
ENSG00000239636 AC004865.2 -214567 sc-eQTL 9.56e-01 0.0108 0.197 0.051 CD8_TCM L2
ENSG00000243749 TMEM35B 377809 sc-eQTL 9.85e-01 0.00295 0.16 0.051 CD8_TCM L2
ENSG00000020129 NCDN -194311 sc-eQTL 8.66e-01 0.0382 0.226 0.05 CD8_TEM L2
ENSG00000054116 TRAPPC3 -792891 sc-eQTL 3.80e-01 -0.178 0.203 0.05 CD8_TEM L2
ENSG00000054118 THRAP3 -861270 sc-eQTL 6.52e-01 0.0912 0.202 0.05 CD8_TEM L2
ENSG00000092847 AGO1 -506646 sc-eQTL 7.64e-01 -0.0636 0.212 0.05 CD8_TEM L2
ENSG00000116544 DLGAP3 433512 sc-eQTL 8.88e-02 -0.335 0.196 0.05 CD8_TEM L2
ENSG00000116560 SFPQ 170017 sc-eQTL 7.23e-01 -0.0446 0.125 0.05 CD8_TEM L2
ENSG00000116863 ADPRHL2 -725730 sc-eQTL 3.96e-01 -0.184 0.216 0.05 CD8_TEM L2
ENSG00000116871 MAP7D1 -792417 sc-eQTL 9.96e-01 -0.00105 0.19 0.05 CD8_TEM L2
ENSG00000126067 PSMB2 -278364 sc-eQTL 9.12e-01 0.0214 0.194 0.05 CD8_TEM L2
ENSG00000126070 AGO3 -567556 sc-eQTL 3.91e-01 0.182 0.212 0.05 CD8_TEM L2
ENSG00000134698 AGO4 -444854 sc-eQTL 6.30e-01 0.103 0.214 0.05 CD8_TEM L2
ENSG00000142686 C1orf216 -355732 sc-eQTL 4.85e-01 -0.14 0.201 0.05 CD8_TEM L2
ENSG00000142687 KIAA0319L -194788 sc-eQTL 9.34e-01 0.0176 0.213 0.05 CD8_TEM L2
ENSG00000142694 EVA1B -960992 sc-eQTL 6.40e-01 -0.0977 0.208 0.05 CD8_TEM L2
ENSG00000146463 ZMYM4 94453 sc-eQTL 8.10e-01 -0.0534 0.221 0.05 CD8_TEM L2
ENSG00000163866 SMIM12 503407 sc-eQTL 2.38e-01 -0.259 0.219 0.05 CD8_TEM L2
ENSG00000163867 ZMYM6 331217 sc-eQTL 3.80e-01 0.192 0.218 0.05 CD8_TEM L2
ENSG00000197056 ZMYM1 330990 sc-eQTL 5.61e-01 0.119 0.203 0.05 CD8_TEM L2
ENSG00000227409 ZMYM4-AS1 -2915 sc-eQTL 8.63e-01 0.0341 0.197 0.05 CD8_TEM L2
ENSG00000239636 AC004865.2 -214567 sc-eQTL 7.23e-02 0.373 0.206 0.05 CD8_TEM L2
ENSG00000243749 TMEM35B 377809 sc-eQTL 9.10e-01 -0.0177 0.156 0.05 CD8_TEM L2
ENSG00000020129 NCDN -194311 sc-eQTL 6.57e-01 0.0946 0.212 0.051 NK_CD56bright L2
ENSG00000054116 TRAPPC3 -792891 sc-eQTL 3.78e-01 -0.162 0.184 0.051 NK_CD56bright L2
ENSG00000054118 THRAP3 -861270 sc-eQTL 5.12e-02 0.388 0.198 0.051 NK_CD56bright L2
ENSG00000092847 AGO1 -506646 sc-eQTL 4.81e-02 -0.412 0.207 0.051 NK_CD56bright L2
ENSG00000116544 DLGAP3 433512 sc-eQTL 7.63e-01 0.0611 0.203 0.051 NK_CD56bright L2
ENSG00000116560 SFPQ 170017 sc-eQTL 4.99e-01 -0.0898 0.133 0.051 NK_CD56bright L2
ENSG00000116863 ADPRHL2 -725730 sc-eQTL 1.88e-01 -0.278 0.211 0.051 NK_CD56bright L2
ENSG00000116871 MAP7D1 -792417 sc-eQTL 2.33e-01 -0.203 0.17 0.051 NK_CD56bright L2
ENSG00000126067 PSMB2 -278364 sc-eQTL 5.75e-02 -0.315 0.165 0.051 NK_CD56bright L2
ENSG00000126070 AGO3 -567556 sc-eQTL 9.10e-03 -0.55 0.209 0.051 NK_CD56bright L2
ENSG00000134698 AGO4 -444854 sc-eQTL 7.59e-01 0.0609 0.199 0.051 NK_CD56bright L2
ENSG00000142686 C1orf216 -355732 sc-eQTL 1.61e-01 -0.286 0.203 0.051 NK_CD56bright L2
ENSG00000142687 KIAA0319L -194788 sc-eQTL 4.82e-01 0.144 0.205 0.051 NK_CD56bright L2
ENSG00000142694 EVA1B -960992 sc-eQTL 5.87e-02 0.314 0.165 0.051 NK_CD56bright L2
ENSG00000146463 ZMYM4 94453 sc-eQTL 1.68e-01 0.258 0.186 0.051 NK_CD56bright L2
ENSG00000163866 SMIM12 503407 sc-eQTL 8.81e-01 0.0334 0.223 0.051 NK_CD56bright L2
ENSG00000163867 ZMYM6 331217 sc-eQTL 8.32e-01 -0.0471 0.222 0.051 NK_CD56bright L2
ENSG00000197056 ZMYM1 330990 sc-eQTL 9.38e-01 0.0153 0.198 0.051 NK_CD56bright L2
ENSG00000227409 ZMYM4-AS1 -2915 sc-eQTL 6.82e-02 0.352 0.192 0.051 NK_CD56bright L2
ENSG00000239636 AC004865.2 -214567 sc-eQTL 7.77e-01 0.0598 0.211 0.051 NK_CD56bright L2
ENSG00000243749 TMEM35B 377809 sc-eQTL 7.48e-01 0.0554 0.173 0.051 NK_CD56bright L2
ENSG00000020129 NCDN -194311 sc-eQTL 7.07e-02 0.37 0.204 0.05 Pro_T L2
ENSG00000054116 TRAPPC3 -792891 sc-eQTL 7.74e-01 0.0481 0.167 0.05 Pro_T L2
ENSG00000054118 THRAP3 -861270 sc-eQTL 3.19e-01 -0.188 0.188 0.05 Pro_T L2
ENSG00000092847 AGO1 -506646 sc-eQTL 9.14e-01 0.0246 0.226 0.05 Pro_T L2
ENSG00000092853 CLSPN -406816 sc-eQTL 5.51e-01 -0.0609 0.102 0.05 Pro_T L2
ENSG00000116544 DLGAP3 433512 sc-eQTL 4.43e-01 -0.148 0.192 0.05 Pro_T L2
ENSG00000116560 SFPQ 170017 sc-eQTL 5.92e-02 0.275 0.145 0.05 Pro_T L2
ENSG00000116863 ADPRHL2 -725730 sc-eQTL 3.22e-02 0.455 0.211 0.05 Pro_T L2
ENSG00000116871 MAP7D1 -792417 sc-eQTL 6.81e-02 0.279 0.152 0.05 Pro_T L2
ENSG00000126067 PSMB2 -278364 sc-eQTL 4.61e-01 -0.0849 0.115 0.05 Pro_T L2
ENSG00000126070 AGO3 -567556 sc-eQTL 9.74e-02 0.344 0.207 0.05 Pro_T L2
ENSG00000134698 AGO4 -444854 sc-eQTL 1.86e-01 0.253 0.191 0.05 Pro_T L2
ENSG00000142686 C1orf216 -355732 sc-eQTL 7.30e-03 -0.528 0.195 0.05 Pro_T L2
ENSG00000142687 KIAA0319L -194788 sc-eQTL 3.86e-01 0.195 0.224 0.05 Pro_T L2
ENSG00000142694 EVA1B -960992 sc-eQTL 6.00e-01 -0.104 0.197 0.05 Pro_T L2
ENSG00000146463 ZMYM4 94453 sc-eQTL 6.98e-01 0.0846 0.218 0.05 Pro_T L2
ENSG00000163866 SMIM12 503407 sc-eQTL 8.00e-01 -0.053 0.209 0.05 Pro_T L2
ENSG00000163867 ZMYM6 331217 sc-eQTL 1.19e-01 0.354 0.226 0.05 Pro_T L2
ENSG00000197056 ZMYM1 330990 sc-eQTL 7.72e-01 -0.055 0.19 0.05 Pro_T L2
ENSG00000227409 ZMYM4-AS1 -2915 sc-eQTL 2.22e-01 -0.245 0.2 0.05 Pro_T L2
ENSG00000239636 AC004865.2 -214567 sc-eQTL 2.52e-01 0.233 0.203 0.05 Pro_T L2
ENSG00000243749 TMEM35B 377809 sc-eQTL 3.74e-01 0.152 0.17 0.05 Pro_T L2
ENSG00000020129 NCDN -194311 sc-eQTL 7.25e-01 0.0862 0.244 0.055 gdT L2
ENSG00000054116 TRAPPC3 -792891 sc-eQTL 7.52e-01 0.0672 0.212 0.055 gdT L2
ENSG00000054118 THRAP3 -861270 sc-eQTL 2.52e-01 0.283 0.246 0.055 gdT L2
ENSG00000092847 AGO1 -506646 sc-eQTL 2.64e-01 -0.29 0.258 0.055 gdT L2
ENSG00000092853 CLSPN -406816 sc-eQTL 4.84e-01 -0.143 0.203 0.055 gdT L2
ENSG00000116544 DLGAP3 433512 sc-eQTL 7.75e-01 0.0681 0.238 0.055 gdT L2
ENSG00000116560 SFPQ 170017 sc-eQTL 2.10e-01 -0.196 0.156 0.055 gdT L2
ENSG00000116863 ADPRHL2 -725730 sc-eQTL 7.30e-01 0.0827 0.239 0.055 gdT L2
ENSG00000116871 MAP7D1 -792417 sc-eQTL 8.36e-01 0.0423 0.204 0.055 gdT L2
ENSG00000126067 PSMB2 -278364 sc-eQTL 2.35e-01 0.261 0.219 0.055 gdT L2
ENSG00000126070 AGO3 -567556 sc-eQTL 3.20e-01 0.237 0.237 0.055 gdT L2
ENSG00000134698 AGO4 -444854 sc-eQTL 3.11e-01 0.236 0.232 0.055 gdT L2
ENSG00000142686 C1orf216 -355732 sc-eQTL 9.85e-01 -0.00459 0.236 0.055 gdT L2
ENSG00000142687 KIAA0319L -194788 sc-eQTL 3.80e-01 -0.209 0.237 0.055 gdT L2
ENSG00000142694 EVA1B -960992 sc-eQTL 1.31e-01 -0.338 0.223 0.055 gdT L2
ENSG00000146463 ZMYM4 94453 sc-eQTL 4.20e-01 0.185 0.229 0.055 gdT L2
ENSG00000163866 SMIM12 503407 sc-eQTL 5.97e-01 -0.131 0.248 0.055 gdT L2
ENSG00000163867 ZMYM6 331217 sc-eQTL 2.81e-02 0.56 0.253 0.055 gdT L2
ENSG00000197056 ZMYM1 330990 sc-eQTL 5.34e-01 0.144 0.23 0.055 gdT L2
ENSG00000227409 ZMYM4-AS1 -2915 sc-eQTL 3.48e-01 -0.205 0.218 0.055 gdT L2
ENSG00000239636 AC004865.2 -214567 sc-eQTL 2.85e-01 0.228 0.212 0.055 gdT L2
ENSG00000243749 TMEM35B 377809 sc-eQTL 6.15e-02 -0.339 0.18 0.055 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000054116 TRAPPC3 -792891 eQTL 0.00653 0.0654 0.024 0.0 0.0 0.054
ENSG00000126067 PSMB2 -278364 eQTL 3.37e-17 -0.205 0.0239 0.0 0.0 0.054
ENSG00000142686 C1orf216 -355732 eQTL 0.0626 0.072 0.0386 0.00173 0.0 0.054
ENSG00000163867 ZMYM6 331217 eQTL 0.0491 -0.0599 0.0304 0.0 0.0 0.054
ENSG00000171812 COL8A2 -762060 eQTL 0.0353 -0.102 0.0483 0.0 0.0 0.054
ENSG00000239636 AC004865.2 -214567 eQTL 0.000317 0.229 0.0635 0.00182 0.00127 0.054
ENSG00000243749 TMEM35B 377809 eQTL 0.00104 0.113 0.0343 0.0 0.0 0.054

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000054118 \N -861270 2.91e-07 1.34e-07 5.82e-08 1.9e-07 1.03e-07 9.05e-08 1.67e-07 5.66e-08 1.45e-07 6.4e-08 1.63e-07 1.15e-07 1.69e-07 7.37e-08 5.72e-08 7.74e-08 4.24e-08 1.51e-07 6.92e-08 4.92e-08 1.25e-07 1.25e-07 1.44e-07 3.17e-08 1.63e-07 1.26e-07 1.18e-07 1.04e-07 1.22e-07 9.88e-08 1.08e-07 3.84e-08 3.59e-08 8.89e-08 4.92e-08 2.68e-08 5.45e-08 8.71e-08 6.57e-08 3.6e-08 4.92e-08 1.46e-07 5.08e-08 1.45e-08 2.64e-08 1.77e-08 1.2e-07 1.93e-09 4.85e-08
ENSG00000126067 PSMB2 -278364 1.27e-06 9.59e-07 2.13e-07 9.69e-07 3.71e-07 5.26e-07 1.6e-06 3.69e-07 1.49e-06 5.15e-07 1.81e-06 7.82e-07 2.25e-06 3e-07 5.4e-07 9.14e-07 8.95e-07 7.05e-07 8.36e-07 6.56e-07 7.72e-07 1.59e-06 8.35e-07 6.25e-07 2.24e-06 4.83e-07 8.99e-07 7.45e-07 1.31e-06 1.27e-06 6.68e-07 2.98e-07 2.57e-07 6.78e-07 6.02e-07 4.86e-07 5.04e-07 1.92e-07 3.74e-07 3.1e-07 2.73e-07 1.55e-06 1.09e-07 2.65e-08 3.24e-07 1.27e-07 2.36e-07 3.8e-08 1.71e-07
ENSG00000243749 TMEM35B 377809 1.21e-06 8.47e-07 2.81e-07 4.37e-07 1.81e-07 3.41e-07 7.02e-07 2.7e-07 7.85e-07 2.85e-07 1.1e-06 5.55e-07 1.22e-06 2.06e-07 4.15e-07 4.47e-07 6.29e-07 5.05e-07 3.74e-07 3.57e-07 2.62e-07 5.66e-07 5.21e-07 3.53e-07 1.38e-06 2.34e-07 4.9e-07 4.4e-07 6.91e-07 8.43e-07 4.47e-07 3.9e-08 1.32e-07 2.29e-07 3.37e-07 3.22e-07 1.86e-07 1.26e-07 7.56e-08 9.44e-09 1.46e-07 9.59e-07 7.23e-08 2.02e-08 1.84e-07 4.38e-08 1.45e-07 8.34e-08 6.58e-08