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Genes within 1Mb (chr1:35326835:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000020129 NCDN -230638 sc-eQTL 3.28e-02 0.437 0.203 0.052 CD4_CTL L2
ENSG00000054116 TRAPPC3 -829218 sc-eQTL 7.10e-01 0.0703 0.188 0.052 CD4_CTL L2
ENSG00000054118 THRAP3 -897597 sc-eQTL 6.05e-01 0.0993 0.192 0.052 CD4_CTL L2
ENSG00000092847 AGO1 -542973 sc-eQTL 3.11e-01 0.212 0.209 0.052 CD4_CTL L2
ENSG00000116544 DLGAP3 397185 sc-eQTL 8.95e-01 -0.0251 0.191 0.052 CD4_CTL L2
ENSG00000116560 SFPQ 133690 sc-eQTL 2.78e-01 0.149 0.137 0.052 CD4_CTL L2
ENSG00000116863 ADPRHL2 -762057 sc-eQTL 8.02e-01 -0.0516 0.205 0.052 CD4_CTL L2
ENSG00000116871 MAP7D1 -828744 sc-eQTL 2.18e-01 -0.205 0.166 0.052 CD4_CTL L2
ENSG00000126067 PSMB2 -314691 sc-eQTL 7.49e-01 0.0627 0.195 0.052 CD4_CTL L2
ENSG00000126070 AGO3 -603883 sc-eQTL 2.18e-01 0.246 0.199 0.052 CD4_CTL L2
ENSG00000134698 AGO4 -481181 sc-eQTL 9.80e-01 -0.00464 0.185 0.052 CD4_CTL L2
ENSG00000142686 C1orf216 -392059 sc-eQTL 2.13e-01 -0.234 0.188 0.052 CD4_CTL L2
ENSG00000142687 KIAA0319L -231115 sc-eQTL 3.71e-01 -0.187 0.209 0.052 CD4_CTL L2
ENSG00000142694 EVA1B -997319 sc-eQTL 7.03e-01 0.0695 0.182 0.052 CD4_CTL L2
ENSG00000146463 ZMYM4 58126 sc-eQTL 7.15e-01 -0.0758 0.207 0.052 CD4_CTL L2
ENSG00000163866 SMIM12 467080 sc-eQTL 3.59e-01 0.179 0.195 0.052 CD4_CTL L2
ENSG00000163867 ZMYM6 294890 sc-eQTL 5.52e-02 0.405 0.21 0.052 CD4_CTL L2
ENSG00000197056 ZMYM1 294663 sc-eQTL 8.99e-01 -0.0272 0.214 0.052 CD4_CTL L2
ENSG00000227409 ZMYM4-AS1 -39242 sc-eQTL 3.95e-01 -0.164 0.192 0.052 CD4_CTL L2
ENSG00000239636 AC004865.2 -250894 sc-eQTL 6.04e-01 -0.0995 0.191 0.052 CD4_CTL L2
ENSG00000243749 TMEM35B 341482 sc-eQTL 6.16e-01 0.0813 0.162 0.052 CD4_CTL L2
ENSG00000020129 NCDN -230638 sc-eQTL 6.38e-01 -0.0978 0.208 0.051 CD8_TCM L2
ENSG00000054116 TRAPPC3 -829218 sc-eQTL 7.29e-01 0.0687 0.198 0.051 CD8_TCM L2
ENSG00000054118 THRAP3 -897597 sc-eQTL 5.47e-02 0.372 0.193 0.051 CD8_TCM L2
ENSG00000092847 AGO1 -542973 sc-eQTL 1.30e-01 -0.302 0.198 0.051 CD8_TCM L2
ENSG00000116544 DLGAP3 397185 sc-eQTL 8.07e-01 0.05 0.204 0.051 CD8_TCM L2
ENSG00000116560 SFPQ 133690 sc-eQTL 8.90e-01 0.0161 0.116 0.051 CD8_TCM L2
ENSG00000116863 ADPRHL2 -762057 sc-eQTL 1.55e-01 0.304 0.213 0.051 CD8_TCM L2
ENSG00000116871 MAP7D1 -828744 sc-eQTL 9.72e-01 -0.00564 0.158 0.051 CD8_TCM L2
ENSG00000126067 PSMB2 -314691 sc-eQTL 7.04e-01 -0.0741 0.195 0.051 CD8_TCM L2
ENSG00000126070 AGO3 -603883 sc-eQTL 2.10e-02 0.465 0.2 0.051 CD8_TCM L2
ENSG00000134698 AGO4 -481181 sc-eQTL 9.46e-01 -0.0141 0.208 0.051 CD8_TCM L2
ENSG00000142686 C1orf216 -392059 sc-eQTL 2.64e-01 0.216 0.193 0.051 CD8_TCM L2
ENSG00000142687 KIAA0319L -231115 sc-eQTL 5.60e-01 -0.109 0.187 0.051 CD8_TCM L2
ENSG00000142694 EVA1B -997319 sc-eQTL 3.52e-01 0.177 0.189 0.051 CD8_TCM L2
ENSG00000146463 ZMYM4 58126 sc-eQTL 2.62e-01 0.225 0.2 0.051 CD8_TCM L2
ENSG00000163866 SMIM12 467080 sc-eQTL 2.46e-01 -0.231 0.198 0.051 CD8_TCM L2
ENSG00000163867 ZMYM6 294890 sc-eQTL 8.75e-01 -0.0344 0.218 0.051 CD8_TCM L2
ENSG00000197056 ZMYM1 294663 sc-eQTL 2.01e-01 0.255 0.199 0.051 CD8_TCM L2
ENSG00000227409 ZMYM4-AS1 -39242 sc-eQTL 8.56e-01 0.0342 0.189 0.051 CD8_TCM L2
ENSG00000239636 AC004865.2 -250894 sc-eQTL 9.56e-01 0.0108 0.197 0.051 CD8_TCM L2
ENSG00000243749 TMEM35B 341482 sc-eQTL 9.85e-01 0.00295 0.16 0.051 CD8_TCM L2
ENSG00000020129 NCDN -230638 sc-eQTL 8.66e-01 0.0382 0.226 0.05 CD8_TEM L2
ENSG00000054116 TRAPPC3 -829218 sc-eQTL 3.80e-01 -0.178 0.203 0.05 CD8_TEM L2
ENSG00000054118 THRAP3 -897597 sc-eQTL 6.52e-01 0.0912 0.202 0.05 CD8_TEM L2
ENSG00000092847 AGO1 -542973 sc-eQTL 7.64e-01 -0.0636 0.212 0.05 CD8_TEM L2
ENSG00000116544 DLGAP3 397185 sc-eQTL 8.88e-02 -0.335 0.196 0.05 CD8_TEM L2
ENSG00000116560 SFPQ 133690 sc-eQTL 7.23e-01 -0.0446 0.125 0.05 CD8_TEM L2
ENSG00000116863 ADPRHL2 -762057 sc-eQTL 3.96e-01 -0.184 0.216 0.05 CD8_TEM L2
ENSG00000116871 MAP7D1 -828744 sc-eQTL 9.96e-01 -0.00105 0.19 0.05 CD8_TEM L2
ENSG00000126067 PSMB2 -314691 sc-eQTL 9.12e-01 0.0214 0.194 0.05 CD8_TEM L2
ENSG00000126070 AGO3 -603883 sc-eQTL 3.91e-01 0.182 0.212 0.05 CD8_TEM L2
ENSG00000134698 AGO4 -481181 sc-eQTL 6.30e-01 0.103 0.214 0.05 CD8_TEM L2
ENSG00000142686 C1orf216 -392059 sc-eQTL 4.85e-01 -0.14 0.201 0.05 CD8_TEM L2
ENSG00000142687 KIAA0319L -231115 sc-eQTL 9.34e-01 0.0176 0.213 0.05 CD8_TEM L2
ENSG00000142694 EVA1B -997319 sc-eQTL 6.40e-01 -0.0977 0.208 0.05 CD8_TEM L2
ENSG00000146463 ZMYM4 58126 sc-eQTL 8.10e-01 -0.0534 0.221 0.05 CD8_TEM L2
ENSG00000163866 SMIM12 467080 sc-eQTL 2.38e-01 -0.259 0.219 0.05 CD8_TEM L2
ENSG00000163867 ZMYM6 294890 sc-eQTL 3.80e-01 0.192 0.218 0.05 CD8_TEM L2
ENSG00000197056 ZMYM1 294663 sc-eQTL 5.61e-01 0.119 0.203 0.05 CD8_TEM L2
ENSG00000227409 ZMYM4-AS1 -39242 sc-eQTL 8.63e-01 0.0341 0.197 0.05 CD8_TEM L2
ENSG00000239636 AC004865.2 -250894 sc-eQTL 7.23e-02 0.373 0.206 0.05 CD8_TEM L2
ENSG00000243749 TMEM35B 341482 sc-eQTL 9.10e-01 -0.0177 0.156 0.05 CD8_TEM L2
ENSG00000020129 NCDN -230638 sc-eQTL 6.57e-01 0.0946 0.212 0.051 NK_CD56bright L2
ENSG00000054116 TRAPPC3 -829218 sc-eQTL 3.78e-01 -0.162 0.184 0.051 NK_CD56bright L2
ENSG00000054118 THRAP3 -897597 sc-eQTL 5.12e-02 0.388 0.198 0.051 NK_CD56bright L2
ENSG00000092847 AGO1 -542973 sc-eQTL 4.81e-02 -0.412 0.207 0.051 NK_CD56bright L2
ENSG00000116544 DLGAP3 397185 sc-eQTL 7.63e-01 0.0611 0.203 0.051 NK_CD56bright L2
ENSG00000116560 SFPQ 133690 sc-eQTL 4.99e-01 -0.0898 0.133 0.051 NK_CD56bright L2
ENSG00000116863 ADPRHL2 -762057 sc-eQTL 1.88e-01 -0.278 0.211 0.051 NK_CD56bright L2
ENSG00000116871 MAP7D1 -828744 sc-eQTL 2.33e-01 -0.203 0.17 0.051 NK_CD56bright L2
ENSG00000126067 PSMB2 -314691 sc-eQTL 5.75e-02 -0.315 0.165 0.051 NK_CD56bright L2
ENSG00000126070 AGO3 -603883 sc-eQTL 9.10e-03 -0.55 0.209 0.051 NK_CD56bright L2
ENSG00000134698 AGO4 -481181 sc-eQTL 7.59e-01 0.0609 0.199 0.051 NK_CD56bright L2
ENSG00000142686 C1orf216 -392059 sc-eQTL 1.61e-01 -0.286 0.203 0.051 NK_CD56bright L2
ENSG00000142687 KIAA0319L -231115 sc-eQTL 4.82e-01 0.144 0.205 0.051 NK_CD56bright L2
ENSG00000142694 EVA1B -997319 sc-eQTL 5.87e-02 0.314 0.165 0.051 NK_CD56bright L2
ENSG00000146463 ZMYM4 58126 sc-eQTL 1.68e-01 0.258 0.186 0.051 NK_CD56bright L2
ENSG00000163866 SMIM12 467080 sc-eQTL 8.81e-01 0.0334 0.223 0.051 NK_CD56bright L2
ENSG00000163867 ZMYM6 294890 sc-eQTL 8.32e-01 -0.0471 0.222 0.051 NK_CD56bright L2
ENSG00000197056 ZMYM1 294663 sc-eQTL 9.38e-01 0.0153 0.198 0.051 NK_CD56bright L2
ENSG00000227409 ZMYM4-AS1 -39242 sc-eQTL 6.82e-02 0.352 0.192 0.051 NK_CD56bright L2
ENSG00000239636 AC004865.2 -250894 sc-eQTL 7.77e-01 0.0598 0.211 0.051 NK_CD56bright L2
ENSG00000243749 TMEM35B 341482 sc-eQTL 7.48e-01 0.0554 0.173 0.051 NK_CD56bright L2
ENSG00000020129 NCDN -230638 sc-eQTL 7.07e-02 0.37 0.204 0.05 Pro_T L2
ENSG00000054116 TRAPPC3 -829218 sc-eQTL 7.74e-01 0.0481 0.167 0.05 Pro_T L2
ENSG00000054118 THRAP3 -897597 sc-eQTL 3.19e-01 -0.188 0.188 0.05 Pro_T L2
ENSG00000092847 AGO1 -542973 sc-eQTL 9.14e-01 0.0246 0.226 0.05 Pro_T L2
ENSG00000092853 CLSPN -443143 sc-eQTL 5.51e-01 -0.0609 0.102 0.05 Pro_T L2
ENSG00000116544 DLGAP3 397185 sc-eQTL 4.43e-01 -0.148 0.192 0.05 Pro_T L2
ENSG00000116560 SFPQ 133690 sc-eQTL 5.92e-02 0.275 0.145 0.05 Pro_T L2
ENSG00000116863 ADPRHL2 -762057 sc-eQTL 3.22e-02 0.455 0.211 0.05 Pro_T L2
ENSG00000116871 MAP7D1 -828744 sc-eQTL 6.81e-02 0.279 0.152 0.05 Pro_T L2
ENSG00000126067 PSMB2 -314691 sc-eQTL 4.61e-01 -0.0849 0.115 0.05 Pro_T L2
ENSG00000126070 AGO3 -603883 sc-eQTL 9.74e-02 0.344 0.207 0.05 Pro_T L2
ENSG00000134698 AGO4 -481181 sc-eQTL 1.86e-01 0.253 0.191 0.05 Pro_T L2
ENSG00000142686 C1orf216 -392059 sc-eQTL 7.30e-03 -0.528 0.195 0.05 Pro_T L2
ENSG00000142687 KIAA0319L -231115 sc-eQTL 3.86e-01 0.195 0.224 0.05 Pro_T L2
ENSG00000142694 EVA1B -997319 sc-eQTL 6.00e-01 -0.104 0.197 0.05 Pro_T L2
ENSG00000146463 ZMYM4 58126 sc-eQTL 6.98e-01 0.0846 0.218 0.05 Pro_T L2
ENSG00000163866 SMIM12 467080 sc-eQTL 8.00e-01 -0.053 0.209 0.05 Pro_T L2
ENSG00000163867 ZMYM6 294890 sc-eQTL 1.19e-01 0.354 0.226 0.05 Pro_T L2
ENSG00000197056 ZMYM1 294663 sc-eQTL 7.72e-01 -0.055 0.19 0.05 Pro_T L2
ENSG00000227409 ZMYM4-AS1 -39242 sc-eQTL 2.22e-01 -0.245 0.2 0.05 Pro_T L2
ENSG00000239636 AC004865.2 -250894 sc-eQTL 2.52e-01 0.233 0.203 0.05 Pro_T L2
ENSG00000243749 TMEM35B 341482 sc-eQTL 3.74e-01 0.152 0.17 0.05 Pro_T L2
ENSG00000020129 NCDN -230638 sc-eQTL 7.25e-01 0.0862 0.244 0.055 gdT L2
ENSG00000054116 TRAPPC3 -829218 sc-eQTL 7.52e-01 0.0672 0.212 0.055 gdT L2
ENSG00000054118 THRAP3 -897597 sc-eQTL 2.52e-01 0.283 0.246 0.055 gdT L2
ENSG00000092847 AGO1 -542973 sc-eQTL 2.64e-01 -0.29 0.258 0.055 gdT L2
ENSG00000092853 CLSPN -443143 sc-eQTL 4.84e-01 -0.143 0.203 0.055 gdT L2
ENSG00000116544 DLGAP3 397185 sc-eQTL 7.75e-01 0.0681 0.238 0.055 gdT L2
ENSG00000116560 SFPQ 133690 sc-eQTL 2.10e-01 -0.196 0.156 0.055 gdT L2
ENSG00000116863 ADPRHL2 -762057 sc-eQTL 7.30e-01 0.0827 0.239 0.055 gdT L2
ENSG00000116871 MAP7D1 -828744 sc-eQTL 8.36e-01 0.0423 0.204 0.055 gdT L2
ENSG00000126067 PSMB2 -314691 sc-eQTL 2.35e-01 0.261 0.219 0.055 gdT L2
ENSG00000126070 AGO3 -603883 sc-eQTL 3.20e-01 0.237 0.237 0.055 gdT L2
ENSG00000134698 AGO4 -481181 sc-eQTL 3.11e-01 0.236 0.232 0.055 gdT L2
ENSG00000142686 C1orf216 -392059 sc-eQTL 9.85e-01 -0.00459 0.236 0.055 gdT L2
ENSG00000142687 KIAA0319L -231115 sc-eQTL 3.80e-01 -0.209 0.237 0.055 gdT L2
ENSG00000142694 EVA1B -997319 sc-eQTL 1.31e-01 -0.338 0.223 0.055 gdT L2
ENSG00000146463 ZMYM4 58126 sc-eQTL 4.20e-01 0.185 0.229 0.055 gdT L2
ENSG00000163866 SMIM12 467080 sc-eQTL 5.97e-01 -0.131 0.248 0.055 gdT L2
ENSG00000163867 ZMYM6 294890 sc-eQTL 2.81e-02 0.56 0.253 0.055 gdT L2
ENSG00000197056 ZMYM1 294663 sc-eQTL 5.34e-01 0.144 0.23 0.055 gdT L2
ENSG00000227409 ZMYM4-AS1 -39242 sc-eQTL 3.48e-01 -0.205 0.218 0.055 gdT L2
ENSG00000239636 AC004865.2 -250894 sc-eQTL 2.85e-01 0.228 0.212 0.055 gdT L2
ENSG00000243749 TMEM35B 341482 sc-eQTL 6.15e-02 -0.339 0.18 0.055 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000054116 TRAPPC3 -829218 eQTL 0.00651 0.0654 0.024 0.0 0.0 0.054
ENSG00000126067 PSMB2 -314691 eQTL 3.62e-17 -0.205 0.0239 0.0 0.0 0.054
ENSG00000142686 C1orf216 -392059 eQTL 0.0626 0.072 0.0386 0.00172 0.0 0.054
ENSG00000163867 ZMYM6 294890 eQTL 0.049 -0.06 0.0304 0.0 0.0 0.054
ENSG00000171812 COL8A2 -798387 eQTL 0.036 -0.101 0.0483 0.0 0.0 0.054
ENSG00000239636 AC004865.2 -250894 eQTL 0.000318 0.229 0.0635 0.00184 0.00127 0.054
ENSG00000243749 TMEM35B 341482 eQTL 0.0011 0.112 0.0343 0.0 0.0 0.054

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000054118 \N -897597 2.61e-07 1.06e-07 3.39e-08 1.78e-07 9.65e-08 9.3e-08 1.42e-07 5.21e-08 1.37e-07 4.24e-08 1.63e-07 7.58e-08 1.26e-07 6.21e-08 5.4e-08 8.01e-08 5.1e-08 1.1e-07 5.22e-08 3.29e-08 1.05e-07 1.3e-07 1.29e-07 4.99e-08 1.29e-07 1.13e-07 1.13e-07 8.71e-08 1.03e-07 1.09e-07 9.58e-08 3.89e-08 2.74e-08 8.21e-08 9.07e-08 3.99e-08 4.51e-08 9.26e-08 8.19e-08 3.12e-08 3.66e-08 1.35e-07 4.1e-08 2.24e-08 8.79e-08 1.68e-08 1.37e-07 4.33e-09 4.74e-08
ENSG00000126067 PSMB2 -314691 1.31e-06 9.45e-07 1.6e-07 5.51e-07 9.93e-08 4.06e-07 9.87e-07 1.37e-07 6.92e-07 3.05e-07 1.25e-06 5.01e-07 2e-06 2.68e-07 4.12e-07 3.57e-07 4.73e-07 5.57e-07 2.88e-07 1.67e-07 3.35e-07 9.46e-07 4.96e-07 1.34e-07 1.49e-06 2.49e-07 4.34e-07 3.95e-07 5.78e-07 8.4e-07 5.23e-07 4.47e-08 5.39e-08 3.91e-07 4.28e-07 4.6e-07 1.84e-07 1.06e-07 1.14e-07 1.82e-08 3.31e-08 1.62e-06 1.1e-07 1.1e-08 1.69e-07 9.77e-08 8.84e-08 5.66e-08 5.65e-08
ENSG00000239636 AC004865.2 -250894 1.96e-06 1.34e-06 3.08e-07 1.32e-06 3.17e-07 6.27e-07 1.46e-06 3.2e-07 1.48e-06 6.18e-07 2.04e-06 6.31e-07 3.04e-06 4.3e-07 4.03e-07 8.62e-07 8e-07 1.16e-06 8.13e-07 6.87e-07 7.67e-07 1.97e-06 8.9e-07 5.53e-07 2.26e-06 4.32e-07 8.73e-07 7.09e-07 1.38e-06 1.31e-06 8.2e-07 2.96e-07 2.31e-07 6.06e-07 5.66e-07 6.12e-07 5.17e-07 1.61e-07 5.03e-07 3.08e-07 1.36e-07 3.17e-06 4.11e-07 3.38e-08 1.52e-07 2.47e-07 1.7e-07 2.77e-08 8.28e-08
ENSG00000243749 TMEM35B 341482 1.26e-06 7.98e-07 1.07e-07 3.04e-07 1.05e-07 3.36e-07 7.02e-07 9.26e-08 4.61e-07 2.8e-07 1.1e-06 3.65e-07 1.54e-06 2.1e-07 3.86e-07 2.45e-07 2.48e-07 5.2e-07 2.13e-07 1.08e-07 2.26e-07 5.83e-07 3.87e-07 9.01e-08 1.02e-06 2.4e-07 2.62e-07 2.71e-07 4.06e-07 6.03e-07 4.32e-07 5.82e-08 5.58e-08 2.29e-07 3.29e-07 3.35e-07 8.52e-08 7.53e-08 7.99e-08 2.24e-08 4.72e-08 1.57e-06 5.66e-08 1.93e-08 1.16e-07 6.12e-08 1.05e-07 2.28e-08 5.16e-08