Genes within 1Mb (chr1:35233650:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000092850 TEKT2 -850444 eQTL 1.45e-09 -0.254 0.0416 0.0 0.0 0.472
ENSG00000092853 CLSPN -536328 pQTL 4.67e-02 -0.0507 0.0255 0.0 0.0 0.471
ENSG00000116544 DLGAP3 304000 eQTL 2.82e-05 -0.0965 0.0229 0.00331 0.00192 0.472
ENSG00000116560 SFPQ 40505 eQTL 6.80e-05 0.044 0.011 0.00299 0.00239 0.472
ENSG00000116819 TFAP2E -339664 eQTL 1.22e-03 0.0795 0.0245 0.0 0.0 0.472
ENSG00000126067 PSMB2 -407876 eQTL 4.74e-02 0.0228 0.0115 0.0 0.0 0.472
ENSG00000134698 AGO4 -574366 eQTL 4.66e-04 -0.0302 0.0086 0.0 0.0 0.472
ENSG00000142686 C1orf216 -485244 eQTL 6.79e-19 -0.156 0.0172 0.0 0.0 0.472
ENSG00000142687 KIAA0319L -324300 eQTL 4.91e-03 0.0318 0.0113 0.0 0.0 0.472
ENSG00000146463 ZMYM4 -35317 eQTL 1.94e-02 -0.0364 0.0155 0.0 0.0 0.472
ENSG00000163866 SMIM12 373895 eQTL 1.52e-02 -0.0599 0.0246 0.0 0.0 0.472
ENSG00000163867 ZMYM6 201705 eQTL 1.78e-08 0.0791 0.0139 0.0 0.0 0.472
ENSG00000171812 COL8A2 -891572 eQTL 1.62e-03 0.0708 0.0224 0.0 0.0 0.472
ENSG00000197056 ZMYM1 201478 eQTL 5.25e-05 -0.0643 0.0158 0.00159 0.0 0.472
ENSG00000239636 AC004865.2 -344079 eQTL 1.41e-64 -0.468 0.0255 0.0 0.0 0.472
ENSG00000243749 TMEM35B 248297 eQTL 1.52e-57 -0.24 0.014 0.0 0.0 0.472


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000092850 TEKT2 -850444 2.8e-07 1.27e-07 5.35e-08 1.82e-07 1.01e-07 9.91e-08 1.61e-07 5.53e-08 1.45e-07 5.67e-08 1.52e-07 1.01e-07 1.52e-07 7.13e-08 6.18e-08 7.5e-08 4.01e-08 1.4e-07 6.07e-08 4.3e-08 1.22e-07 1.24e-07 1.45e-07 2.91e-08 1.55e-07 1.26e-07 1.13e-07 9.74e-08 1.23e-07 9.49e-08 1.02e-07 3.08e-08 4.02e-08 8.23e-08 5.99e-08 3.28e-08 5.31e-08 8.61e-08 6.63e-08 4.47e-08 5.34e-08 1.4e-07 5.22e-08 1.2e-08 3.81e-08 1.89e-08 1.2e-07 1.88e-09 4.8e-08
ENSG00000116560 SFPQ 40505 9.27e-06 9.29e-06 1.92e-06 5.54e-06 2.38e-06 4.6e-06 1.14e-05 2.18e-06 9.65e-06 5.38e-06 1.23e-05 5.48e-06 1.59e-05 3.67e-06 2.94e-06 6.6e-06 4.93e-06 8.13e-06 3.14e-06 3.12e-06 6.05e-06 9.68e-06 9.05e-06 3.85e-06 1.53e-05 4.39e-06 5.24e-06 4.45e-06 1.18e-05 1.18e-05 5.62e-06 9.89e-07 1.29e-06 3.78e-06 4.62e-06 2.85e-06 1.72e-06 1.95e-06 2.18e-06 1.38e-06 1.3e-06 1.28e-05 1.38e-06 2.8e-07 1.03e-06 1.74e-06 1.73e-06 6.59e-07 5.68e-07
ENSG00000116819 TFAP2E -339664 1.22e-06 9.07e-07 3.06e-07 3.22e-07 1.96e-07 3.32e-07 7.44e-07 3.02e-07 9.89e-07 3.11e-07 1.12e-06 5.81e-07 1.35e-06 2.1e-07 4.3e-07 5.69e-07 7.39e-07 5.33e-07 3.66e-07 4.13e-07 2.83e-07 7.21e-07 6.1e-07 4.62e-07 1.53e-06 2.8e-07 5.83e-07 4.75e-07 8.24e-07 9.57e-07 4.61e-07 4.57e-08 1.48e-07 3.51e-07 3.4e-07 3.16e-07 2.46e-07 1.5e-07 1.6e-07 3.01e-08 2.38e-07 1.08e-06 6.53e-08 1.23e-08 1.93e-07 7.03e-08 1.71e-07 8.49e-08 9.42e-08
ENSG00000116871 \N -921929 2.67e-07 1.3e-07 5.14e-08 1.82e-07 9.24e-08 9.76e-08 1.53e-07 5.43e-08 1.45e-07 5.42e-08 1.57e-07 9e-08 1.45e-07 6.76e-08 6.04e-08 7.36e-08 4.17e-08 1.33e-07 5.75e-08 4.23e-08 1.19e-07 1.27e-07 1.44e-07 2.95e-08 1.46e-07 1.21e-07 1.07e-07 9.61e-08 1.16e-07 1.07e-07 9.7e-08 3.66e-08 3.66e-08 8.25e-08 7.36e-08 3.49e-08 5.11e-08 9.23e-08 6.54e-08 3.8e-08 5.14e-08 1.36e-07 5.2e-08 1.57e-08 4.25e-08 1.84e-08 1.19e-07 3.8e-09 5.01e-08
ENSG00000134698 AGO4 -574366 4.37e-07 1.92e-07 7.72e-08 2.41e-07 1.07e-07 1.13e-07 2.86e-07 7.52e-08 2.12e-07 1.28e-07 2.18e-07 1.82e-07 3.18e-07 8.66e-08 7.98e-08 1.14e-07 7.3e-08 2.66e-07 8.68e-08 8.69e-08 1.33e-07 2.07e-07 2e-07 4.81e-08 2.86e-07 1.86e-07 1.39e-07 1.48e-07 1.58e-07 2e-07 1.43e-07 4.78e-08 4.87e-08 9.09e-08 8.75e-08 5.14e-08 6.24e-08 5.71e-08 5.8e-08 8.34e-08 4.9e-08 2e-07 3.26e-08 1.08e-08 7.26e-08 8.07e-09 8.94e-08 0.0 4.74e-08
ENSG00000142686 C1orf216 -485244 7.57e-07 3.35e-07 1.05e-07 2.87e-07 1.06e-07 1.57e-07 4.14e-07 1.01e-07 3.17e-07 2.01e-07 4.13e-07 2.98e-07 5.39e-07 1.01e-07 1.48e-07 1.92e-07 1.69e-07 3.44e-07 1.62e-07 1.08e-07 1.8e-07 2.96e-07 2.81e-07 1.21e-07 4.67e-07 2.36e-07 2.22e-07 1.95e-07 2.78e-07 3.93e-07 2e-07 7.6e-08 5.48e-08 1.21e-07 2.43e-07 7.56e-08 7.97e-08 7.75e-08 5.86e-08 6.05e-08 5.38e-08 3.27e-07 2.63e-08 2.05e-08 1.16e-07 1.81e-08 7.36e-08 3.14e-09 5.43e-08
ENSG00000163867 ZMYM6 201705 1.93e-06 1.92e-06 2.77e-07 1.25e-06 4.37e-07 6.47e-07 1.21e-06 4.75e-07 1.78e-06 6.56e-07 1.93e-06 1.28e-06 2.68e-06 5.72e-07 4e-07 1.15e-06 1.13e-06 1.34e-06 5.54e-07 7.37e-07 6.53e-07 1.99e-06 1.6e-06 9.74e-07 2.43e-06 1.12e-06 1.12e-06 1.06e-06 1.75e-06 1.62e-06 7.46e-07 2.83e-07 3.99e-07 8.53e-07 8.69e-07 7.36e-07 6.55e-07 3.21e-07 6.21e-07 1.68e-07 3.05e-07 2.5e-06 4.31e-07 1.74e-07 3.42e-07 3.13e-07 4.12e-07 2.43e-07 2.3e-07
ENSG00000197056 ZMYM1 201478 1.93e-06 1.92e-06 2.77e-07 1.25e-06 4.37e-07 6.47e-07 1.21e-06 4.75e-07 1.76e-06 6.73e-07 1.94e-06 1.28e-06 2.68e-06 5.72e-07 4.02e-07 1.17e-06 1.13e-06 1.34e-06 5.54e-07 7.55e-07 6.53e-07 1.95e-06 1.61e-06 9.76e-07 2.49e-06 1.12e-06 1.14e-06 1.06e-06 1.75e-06 1.58e-06 7.46e-07 2.83e-07 3.99e-07 8.88e-07 8.69e-07 7.36e-07 6.55e-07 3.21e-07 6.21e-07 1.68e-07 3.05e-07 2.5e-06 4.31e-07 1.74e-07 3.42e-07 3.13e-07 4.12e-07 2.44e-07 2.3e-07
ENSG00000239636 AC004865.2 -344079 1.25e-06 8.78e-07 3e-07 3.25e-07 1.79e-07 3.12e-07 7.32e-07 2.88e-07 9.02e-07 2.77e-07 1.09e-06 5.69e-07 1.3e-06 2.12e-07 4.21e-07 5.49e-07 7.22e-07 5.27e-07 3.77e-07 4.06e-07 2.89e-07 7.26e-07 5.81e-07 4.61e-07 1.52e-06 2.54e-07 5.82e-07 4.77e-07 8e-07 9.22e-07 4.61e-07 4.5e-08 1.36e-07 3.17e-07 3.24e-07 3.35e-07 2.34e-07 1.38e-07 1.23e-07 9.81e-09 2.12e-07 1.02e-06 5.54e-08 1.21e-08 1.82e-07 6.87e-08 1.76e-07 8.25e-08 9.13e-08
ENSG00000243749 TMEM35B 248297 1.27e-06 1.01e-06 2.83e-07 1.14e-06 3.76e-07 6.02e-07 1.58e-06 4.11e-07 1.5e-06 5.99e-07 1.88e-06 7.85e-07 2.38e-06 2.74e-07 5.01e-07 9.51e-07 8.85e-07 9.52e-07 7.7e-07 5.05e-07 8.13e-07 1.8e-06 9.91e-07 6.27e-07 2.16e-06 7.54e-07 9.37e-07 8.91e-07 1.61e-06 1.17e-06 7.58e-07 2.57e-07 2.84e-07 6.19e-07 5.34e-07 5.08e-07 6.81e-07 2.78e-07 4.74e-07 3.15e-07 2.72e-07 1.63e-06 1.67e-07 8.06e-08 3.14e-07 1.98e-07 2.46e-07 5.98e-08 2.41e-07