Genes within 1Mb (chr1:35005049:A:ACT):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116544 DLGAP3 75399 eQTL 2.59e-03 -0.0697 0.0231 0.0 0.0 0.403
ENSG00000116560 SFPQ -188096 eQTL 4.29e-05 0.0452 0.011 0.00527 0.00408 0.403
ENSG00000116819 TFAP2E -568265 eQTL 3.03e-02 0.0534 0.0246 0.0 0.0 0.403
ENSG00000134698 AGO4 -802967 eQTL 2.62e-02 -0.0193 0.00865 0.0 0.0 0.403
ENSG00000142686 C1orf216 -713845 eQTL 9.28e-12 -0.121 0.0176 0.0 0.0 0.403
ENSG00000163866 SMIM12 145294 eQTL 1.54e-02 -0.0599 0.0247 0.0 0.0 0.403
ENSG00000163867 ZMYM6 -26896 eQTL 4.05e-11 0.0925 0.0139 0.0116 0.0113 0.403
ENSG00000189280 GJB5 250002 eQTL 3.38e-02 -0.0805 0.0379 0.0 0.0 0.403
ENSG00000197056 ZMYM1 -27123 eQTL 2.39e-05 -0.0673 0.0158 0.00228 0.0 0.403
ENSG00000239636 AC004865.2 -572680 eQTL 8.78e-30 -0.326 0.0278 0.0 0.0 0.403
ENSG00000243749 TMEM35B 19696 eQTL 7.61e-99 -0.302 0.0127 0.00569 0.0117 0.403


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000020129 \N -552424 2.61e-06 1.24e-06 1.63e-07 1.56e-06 2.76e-07 7.29e-07 1.36e-06 1.59e-07 1.2e-06 3.82e-07 1.39e-06 5.73e-07 2.13e-06 2.29e-07 3.56e-07 5.29e-07 7.76e-07 7.19e-07 5.26e-07 4.95e-07 7.67e-07 9.14e-07 8.96e-07 5.79e-07 1.97e-06 4.23e-07 6.91e-07 5.29e-07 1.3e-06 9.45e-07 5.2e-07 3.99e-08 2.33e-07 5.5e-07 5.95e-07 4.36e-07 1.43e-07 8.15e-08 3.93e-07 2.8e-07 6e-08 4.47e-06 5.42e-07 1.31e-07 2.74e-07 5.38e-08 1.03e-07 0.0 8.44e-08
ENSG00000116560 SFPQ -188096 7.96e-06 7.72e-06 8.24e-07 4.25e-06 1.47e-06 4.28e-06 9.3e-06 9.78e-07 5.09e-06 2.42e-06 5.99e-06 2.82e-06 7.51e-06 2.11e-06 9.63e-07 3.69e-06 2.07e-06 3.95e-06 1.36e-06 1.02e-06 3.53e-06 4.53e-06 4.63e-06 1.99e-06 5.2e-06 2.09e-06 2.32e-06 1.77e-06 4.49e-06 4.17e-06 2.83e-06 5.09e-07 5.38e-07 1.52e-06 2.09e-06 1.31e-06 1e-06 4.72e-07 9.13e-07 7.35e-07 2.77e-07 1.25e-05 2.34e-06 1.6e-07 1.05e-06 3.75e-07 8e-07 1.95e-07 4.98e-07
ENSG00000134698 AGO4 -802967 1.24e-06 7.98e-07 6.41e-08 6.35e-07 1.13e-07 4.12e-07 7.96e-07 5.78e-08 3.03e-07 2.01e-07 6.39e-07 2.28e-07 9.37e-07 9.15e-08 6.93e-08 1.53e-07 8.74e-08 4.27e-07 1.81e-07 7.29e-08 2.43e-07 2.7e-07 3.45e-07 1.25e-07 6.87e-07 2.74e-07 2.43e-07 1.69e-07 4.15e-07 2.26e-07 2.11e-07 4.23e-08 5.58e-08 3.51e-07 3.52e-07 1.09e-07 5.67e-08 8.89e-08 6.01e-08 8.36e-09 3.95e-08 2.07e-06 1.1e-07 3.36e-08 1.82e-07 8.76e-09 1.2e-07 3.8e-09 5.61e-08
ENSG00000142686 C1orf216 -713845 1.43e-06 9.09e-07 8.99e-08 1.15e-06 1.05e-07 5.09e-07 1.22e-06 7.56e-08 5.49e-07 2.62e-07 1.02e-06 3.61e-07 1.28e-06 1.17e-07 1.27e-07 2.1e-07 2.48e-07 5.2e-07 2.65e-07 1.51e-07 3.6e-07 3.92e-07 4.4e-07 2.24e-07 1.14e-06 2.34e-07 3.93e-07 2.57e-07 6.62e-07 4.72e-07 3.38e-07 5.46e-08 4.57e-08 5.6e-07 3.18e-07 2.42e-07 7.86e-08 7.68e-08 7.42e-08 4.23e-08 5.13e-08 2.75e-06 3.37e-07 5.7e-08 2.96e-07 1.59e-08 8.67e-08 1.91e-09 5.96e-08
ENSG00000163867 ZMYM6 -26896 0.000146 6.27e-05 7.19e-06 1.72e-05 7.94e-06 2.74e-05 8.65e-05 6.17e-06 5.38e-05 1.64e-05 6.84e-05 3.68e-05 9.98e-05 1.89e-05 9.18e-06 4.23e-05 3.08e-05 3.42e-05 1.12e-05 7.7e-06 2.01e-05 6.35e-05 6.81e-05 1.49e-05 6.31e-05 1.69e-05 2.66e-05 1.53e-05 4.25e-05 2.9e-05 3.65e-05 3.92e-06 5.05e-06 9.72e-06 1.16e-05 7.85e-06 3.65e-06 3.25e-06 8.89e-06 4.53e-06 1.9e-06 8.29e-05 1.13e-05 4.67e-07 5.67e-06 5.22e-06 5.2e-06 1.71e-06 1.64e-06
ENSG00000189280 GJB5 250002 5.63e-06 5e-06 3.23e-07 3.37e-06 1.2e-06 2.48e-06 5.25e-06 7.94e-07 3.05e-06 1.4e-06 3.62e-06 2.61e-06 6.07e-06 1.2e-06 6.59e-07 1.98e-06 1.64e-06 2.75e-06 1.49e-06 1.3e-06 2.77e-06 3.18e-06 3.3e-06 1.71e-06 4.08e-06 1.48e-06 1.9e-06 1.5e-06 3.78e-06 2.65e-06 2.02e-06 3.79e-07 8.14e-07 1.75e-06 1.63e-06 9e-07 8.33e-07 4.24e-07 1.07e-06 4.23e-07 1.39e-07 9.18e-06 1.45e-06 1.66e-07 7.73e-07 3.28e-07 2.69e-07 1.71e-07 3.03e-07
ENSG00000197056 ZMYM1 -27123 0.000146 6.18e-05 7.16e-06 1.72e-05 7.94e-06 2.71e-05 8.65e-05 6.11e-06 5.38e-05 1.64e-05 6.84e-05 3.61e-05 9.82e-05 1.9e-05 9.24e-06 4.2e-05 3.08e-05 3.42e-05 1.1e-05 7.7e-06 1.97e-05 6.35e-05 6.72e-05 1.48e-05 6.25e-05 1.67e-05 2.66e-05 1.53e-05 4.2e-05 2.88e-05 3.63e-05 3.92e-06 5.05e-06 9.72e-06 1.16e-05 7.79e-06 3.65e-06 3.26e-06 8.83e-06 4.53e-06 1.9e-06 8.29e-05 1.13e-05 4.67e-07 5.6e-06 5.22e-06 5.2e-06 1.76e-06 1.64e-06
ENSG00000239636 AC004865.2 -572680 2.28e-06 1.08e-06 1.45e-07 1.43e-06 2.53e-07 6.97e-07 1.49e-06 1.45e-07 1.11e-06 3.13e-07 1.41e-06 5.55e-07 1.97e-06 2.05e-07 3.16e-07 4.79e-07 7.47e-07 6.8e-07 4.54e-07 4.38e-07 7.8e-07 7.58e-07 7.52e-07 5.36e-07 1.92e-06 3.87e-07 6.16e-07 4.94e-07 1.25e-06 9.21e-07 5.37e-07 5.88e-08 2.31e-07 5.89e-07 5.63e-07 4.37e-07 1.05e-07 8.33e-08 3.52e-07 2.99e-07 5.71e-08 4.1e-06 6.52e-07 1.3e-07 2.94e-07 4.43e-08 9.34e-08 0.0 9.23e-08
ENSG00000243749 TMEM35B 19696 0.00016 8.49e-05 9.31e-06 2.03e-05 9.38e-06 3.34e-05 0.000104 7.32e-06 6.68e-05 2.09e-05 8.62e-05 4.27e-05 0.00012 2.62e-05 1.24e-05 5.51e-05 3.91e-05 4.2e-05 1.37e-05 9.36e-06 2.59e-05 8.29e-05 8.36e-05 1.87e-05 7.9e-05 1.98e-05 3.58e-05 1.94e-05 5.59e-05 3.48e-05 4.74e-05 4.67e-06 5.68e-06 1.21e-05 1.37e-05 9e-06 4.19e-06 3.78e-06 1.01e-05 4.94e-06 2.01e-06 9.67e-05 1.27e-05 5.02e-07 6.73e-06 6.61e-06 6.79e-06 2.27e-06 2e-06