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Genes within 1Mb (chr1:34613801:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000020129 NCDN -943672 sc-eQTL 8.51e-01 0.0399 0.212 0.051 cDC L2
ENSG00000116544 DLGAP3 -315849 sc-eQTL 8.52e-01 0.0391 0.21 0.051 cDC L2
ENSG00000116560 SFPQ -579344 sc-eQTL 2.14e-01 -0.165 0.133 0.051 cDC L2
ENSG00000142687 KIAA0319L -944149 sc-eQTL 9.16e-02 -0.347 0.204 0.051 cDC L2
ENSG00000146463 ZMYM4 -654908 sc-eQTL 5.79e-01 0.101 0.182 0.051 cDC L2
ENSG00000163866 SMIM12 -245954 sc-eQTL 4.69e-01 -0.144 0.199 0.051 cDC L2
ENSG00000163867 ZMYM6 -418144 sc-eQTL 7.73e-01 0.0602 0.209 0.051 cDC L2
ENSG00000197056 ZMYM1 -418371 sc-eQTL 3.59e-02 0.412 0.195 0.051 cDC L2
ENSG00000227409 ZMYM4-AS1 -752276 sc-eQTL 7.45e-01 -0.064 0.197 0.051 cDC L2
ENSG00000239636 AC004865.2 -963928 sc-eQTL 7.73e-01 0.0598 0.207 0.051 cDC L2
ENSG00000243749 TMEM35B -371552 sc-eQTL 2.61e-01 -0.219 0.195 0.051 cDC L2
ENSG00000020129 NCDN -943672 sc-eQTL 9.43e-01 0.0172 0.24 0.055 gdT L2
ENSG00000116544 DLGAP3 -315849 sc-eQTL 2.18e-02 0.53 0.228 0.055 gdT L2
ENSG00000116560 SFPQ -579344 sc-eQTL 7.74e-01 0.044 0.153 0.055 gdT L2
ENSG00000142687 KIAA0319L -944149 sc-eQTL 5.27e-01 0.147 0.232 0.055 gdT L2
ENSG00000146463 ZMYM4 -654908 sc-eQTL 9.50e-01 0.0142 0.224 0.055 gdT L2
ENSG00000163866 SMIM12 -245954 sc-eQTL 3.83e-01 -0.212 0.242 0.055 gdT L2
ENSG00000163867 ZMYM6 -418144 sc-eQTL 7.55e-01 0.0787 0.252 0.055 gdT L2
ENSG00000197056 ZMYM1 -418371 sc-eQTL 3.43e-01 0.214 0.225 0.055 gdT L2
ENSG00000227409 ZMYM4-AS1 -752276 sc-eQTL 8.30e-01 0.046 0.214 0.055 gdT L2
ENSG00000239636 AC004865.2 -963928 sc-eQTL 7.63e-01 0.0631 0.209 0.055 gdT L2
ENSG00000243749 TMEM35B -371552 sc-eQTL 2.96e-01 -0.186 0.178 0.055 gdT L2
ENSG00000020129 NCDN -943672 sc-eQTL 7.60e-01 0.0662 0.216 0.056 pDC L2
ENSG00000116544 DLGAP3 -315849 sc-eQTL 8.97e-01 -0.0275 0.212 0.056 pDC L2
ENSG00000116560 SFPQ -579344 sc-eQTL 3.81e-01 0.122 0.139 0.056 pDC L2
ENSG00000142687 KIAA0319L -944149 sc-eQTL 6.27e-01 0.114 0.234 0.056 pDC L2
ENSG00000146463 ZMYM4 -654908 sc-eQTL 2.02e-01 -0.27 0.211 0.056 pDC L2
ENSG00000163866 SMIM12 -245954 sc-eQTL 6.32e-01 -0.106 0.221 0.056 pDC L2
ENSG00000163867 ZMYM6 -418144 sc-eQTL 2.47e-02 0.44 0.194 0.056 pDC L2
ENSG00000197056 ZMYM1 -418371 sc-eQTL 6.42e-01 0.0947 0.204 0.056 pDC L2
ENSG00000227409 ZMYM4-AS1 -752276 sc-eQTL 1.49e-01 -0.295 0.204 0.056 pDC L2
ENSG00000239636 AC004865.2 -963928 sc-eQTL 3.27e-01 0.217 0.22 0.056 pDC L2
ENSG00000243749 TMEM35B -371552 sc-eQTL 2.62e-01 -0.203 0.18 0.056 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000230163 \N -236893 1.4e-06 1.4e-06 2.72e-07 1.32e-06 4.92e-07 6.45e-07 1.43e-06 4.05e-07 1.7e-06 7.11e-07 2.07e-06 1.15e-06 2.64e-06 3.31e-07 4.03e-07 9.91e-07 1.12e-06 1.17e-06 5.38e-07 5.11e-07 6.12e-07 1.93e-06 1.35e-06 7.64e-07 2.35e-06 9.84e-07 1.02e-06 8.53e-07 1.65e-06 1.31e-06 8.2e-07 2.44e-07 2.88e-07 6.13e-07 5.91e-07 6.02e-07 7.08e-07 3.6e-07 5.35e-07 2.23e-07 3.03e-07 1.95e-06 3.5e-07 1.41e-07 3.79e-07 2.45e-07 3.68e-07 1.7e-07 2.97e-07