Genes within 1Mb (chr1:34400682:C:T):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116544 DLGAP3 -528968 sc-eQTL 3.63e-01 0.204 0.223 0.051 pDC L2
ENSG00000116560 SFPQ -792463 sc-eQTL 7.26e-01 -0.0516 0.147 0.051 pDC L2
ENSG00000134686 PHC2 969630 sc-eQTL 6.20e-01 -0.0918 0.185 0.051 pDC L2
ENSG00000146463 ZMYM4 -868027 sc-eQTL 5.55e-01 0.132 0.224 0.051 pDC L2
ENSG00000163866 SMIM12 -459073 sc-eQTL 5.79e-01 -0.13 0.233 0.051 pDC L2
ENSG00000163867 ZMYM6 -631263 sc-eQTL 9.92e-01 -0.00211 0.208 0.051 pDC L2
ENSG00000197056 ZMYM1 -631490 sc-eQTL 3.70e-01 0.193 0.215 0.051 pDC L2
ENSG00000227409 ZMYM4-AS1 -965395 sc-eQTL 8.18e-01 -0.0498 0.217 0.051 pDC L2
ENSG00000243749 TMEM35B -584671 sc-eQTL 3.00e-01 -0.198 0.191 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000229994 RPL5P4 -950040 eQTL 0.0123 0.184 0.0735 0.00107 0.0 0.0515


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000229994 RPL5P4 -950040 2.74e-07 1.25e-07 5.14e-08 1.84e-07 9.24e-08 9.8e-08 1.53e-07 5.48e-08 1.45e-07 5.42e-08 1.54e-07 9e-08 1.45e-07 6.76e-08 6.04e-08 7.36e-08 4.17e-08 1.27e-07 5.75e-08 4.16e-08 1.19e-07 1.27e-07 1.44e-07 2.95e-08 1.4e-07 1.21e-07 1.07e-07 9.65e-08 1.12e-07 1.03e-07 9.7e-08 3.65e-08 3.61e-08 8.25e-08 7.51e-08 3.65e-08 5.08e-08 9.3e-08 6.54e-08 3.87e-08 5.13e-08 1.35e-07 5.22e-08 2.03e-08 4.92e-08 1.83e-08 1.22e-07 3.8e-09 5.04e-08