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Genes within 1Mb (chr1:34076553:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 995557 sc-eQTL 1.93e-02 0.417 0.177 0.052 DC L1
ENSG00000116525 TRIM62 894494 sc-eQTL 8.90e-01 0.0269 0.194 0.052 DC L1
ENSG00000116544 DLGAP3 -853097 sc-eQTL 6.52e-01 0.081 0.179 0.052 DC L1
ENSG00000134686 PHC2 645501 sc-eQTL 4.02e-02 -0.266 0.129 0.052 DC L1
ENSG00000142920 AZIN2 995449 sc-eQTL 4.67e-01 0.0763 0.105 0.052 DC L1
ENSG00000160094 ZNF362 820061 sc-eQTL 5.84e-01 0.0924 0.169 0.052 DC L1
ENSG00000163866 SMIM12 -783202 sc-eQTL 6.91e-01 -0.0705 0.177 0.052 DC L1
ENSG00000163867 ZMYM6 -955392 sc-eQTL 5.06e-01 0.112 0.168 0.052 DC L1
ENSG00000197056 ZMYM1 -955619 sc-eQTL 3.61e-01 -0.166 0.182 0.052 DC L1
ENSG00000243749 TMEM35B -908800 sc-eQTL 2.77e-01 0.175 0.16 0.052 DC L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 995557 sc-eQTL 8.53e-01 0.0364 0.196 0.052 CD4_CTL L2
ENSG00000116525 TRIM62 894494 sc-eQTL 4.02e-01 -0.161 0.192 0.052 CD4_CTL L2
ENSG00000116544 DLGAP3 -853097 sc-eQTL 4.48e-01 -0.144 0.189 0.052 CD4_CTL L2
ENSG00000134686 PHC2 645501 sc-eQTL 5.77e-01 -0.101 0.182 0.052 CD4_CTL L2
ENSG00000142920 AZIN2 995449 sc-eQTL 8.03e-01 0.0466 0.187 0.052 CD4_CTL L2
ENSG00000160094 ZNF362 820061 sc-eQTL 4.85e-01 -0.135 0.192 0.052 CD4_CTL L2
ENSG00000163866 SMIM12 -783202 sc-eQTL 1.44e-01 -0.284 0.193 0.052 CD4_CTL L2
ENSG00000163867 ZMYM6 -955392 sc-eQTL 4.62e-01 -0.155 0.21 0.052 CD4_CTL L2
ENSG00000197056 ZMYM1 -955619 sc-eQTL 9.82e-01 0.00478 0.212 0.052 CD4_CTL L2
ENSG00000243749 TMEM35B -908800 sc-eQTL 8.63e-01 0.0279 0.161 0.052 CD4_CTL L2
ENSG00000004455 AK2 995557 sc-eQTL 3.09e-01 -0.189 0.185 0.053 CD8_TCM L2
ENSG00000116525 TRIM62 894494 sc-eQTL 7.69e-01 -0.06 0.204 0.053 CD8_TCM L2
ENSG00000116544 DLGAP3 -853097 sc-eQTL 2.45e-02 -0.434 0.192 0.053 CD8_TCM L2
ENSG00000134686 PHC2 645501 sc-eQTL 7.71e-01 -0.0464 0.159 0.053 CD8_TCM L2
ENSG00000142920 AZIN2 995449 sc-eQTL 4.93e-01 -0.132 0.193 0.053 CD8_TCM L2
ENSG00000160094 ZNF362 820061 sc-eQTL 1.12e-01 -0.302 0.189 0.053 CD8_TCM L2
ENSG00000163866 SMIM12 -783202 sc-eQTL 9.46e-01 -0.0129 0.189 0.053 CD8_TCM L2
ENSG00000163867 ZMYM6 -955392 sc-eQTL 4.04e-01 0.172 0.206 0.053 CD8_TCM L2
ENSG00000197056 ZMYM1 -955619 sc-eQTL 6.25e-02 0.352 0.188 0.053 CD8_TCM L2
ENSG00000243749 TMEM35B -908800 sc-eQTL 2.24e-01 0.185 0.152 0.053 CD8_TCM L2
ENSG00000004455 AK2 995557 sc-eQTL 3.91e-01 0.175 0.203 0.05 CD8_TEM L2
ENSG00000116525 TRIM62 894494 sc-eQTL 7.95e-01 -0.055 0.211 0.05 CD8_TEM L2
ENSG00000116544 DLGAP3 -853097 sc-eQTL 2.93e-01 -0.196 0.185 0.05 CD8_TEM L2
ENSG00000134686 PHC2 645501 sc-eQTL 5.04e-01 0.132 0.198 0.05 CD8_TEM L2
ENSG00000142920 AZIN2 995449 sc-eQTL 6.21e-01 -0.0878 0.178 0.05 CD8_TEM L2
ENSG00000160094 ZNF362 820061 sc-eQTL 4.52e-01 -0.151 0.2 0.05 CD8_TEM L2
ENSG00000163866 SMIM12 -783202 sc-eQTL 9.86e-01 0.00367 0.207 0.05 CD8_TEM L2
ENSG00000163867 ZMYM6 -955392 sc-eQTL 1.72e-01 -0.28 0.205 0.05 CD8_TEM L2
ENSG00000197056 ZMYM1 -955619 sc-eQTL 7.43e-01 -0.0629 0.192 0.05 CD8_TEM L2
ENSG00000243749 TMEM35B -908800 sc-eQTL 3.12e-01 -0.149 0.147 0.05 CD8_TEM L2
ENSG00000004455 AK2 995557 sc-eQTL 3.71e-01 0.179 0.199 0.051 NK_CD56bright L2
ENSG00000116525 TRIM62 894494 sc-eQTL 1.95e-01 -0.259 0.199 0.051 NK_CD56bright L2
ENSG00000116544 DLGAP3 -853097 sc-eQTL 8.27e-01 0.0424 0.194 0.051 NK_CD56bright L2
ENSG00000134686 PHC2 645501 sc-eQTL 3.33e-01 -0.175 0.18 0.051 NK_CD56bright L2
ENSG00000160094 ZNF362 820061 sc-eQTL 3.07e-01 0.21 0.205 0.051 NK_CD56bright L2
ENSG00000163866 SMIM12 -783202 sc-eQTL 8.10e-01 -0.0514 0.214 0.051 NK_CD56bright L2
ENSG00000163867 ZMYM6 -955392 sc-eQTL 6.80e-01 -0.0879 0.213 0.051 NK_CD56bright L2
ENSG00000197056 ZMYM1 -955619 sc-eQTL 6.04e-01 -0.0985 0.19 0.051 NK_CD56bright L2
ENSG00000243749 TMEM35B -908800 sc-eQTL 3.84e-01 0.144 0.165 0.051 NK_CD56bright L2
ENSG00000004455 AK2 995557 sc-eQTL 3.62e-01 -0.126 0.138 0.05 Pro_T L2
ENSG00000116525 TRIM62 894494 sc-eQTL 8.54e-01 0.0338 0.184 0.05 Pro_T L2
ENSG00000116544 DLGAP3 -853097 sc-eQTL 4.69e-02 0.346 0.173 0.05 Pro_T L2
ENSG00000134686 PHC2 645501 sc-eQTL 4.91e-01 0.107 0.155 0.05 Pro_T L2
ENSG00000142920 AZIN2 995449 sc-eQTL 1.88e-01 -0.203 0.154 0.05 Pro_T L2
ENSG00000160094 ZNF362 820061 sc-eQTL 7.15e-01 0.0672 0.184 0.05 Pro_T L2
ENSG00000163866 SMIM12 -783202 sc-eQTL 1.26e-01 0.291 0.189 0.05 Pro_T L2
ENSG00000163867 ZMYM6 -955392 sc-eQTL 3.04e-01 -0.212 0.206 0.05 Pro_T L2
ENSG00000197056 ZMYM1 -955619 sc-eQTL 9.05e-01 -0.0206 0.172 0.05 Pro_T L2
ENSG00000243749 TMEM35B -908800 sc-eQTL 6.83e-01 0.0635 0.155 0.05 Pro_T L2
ENSG00000004455 AK2 995557 sc-eQTL 3.17e-01 0.19 0.189 0.054 cDC L2
ENSG00000116525 TRIM62 894494 sc-eQTL 7.56e-01 0.0612 0.197 0.054 cDC L2
ENSG00000116544 DLGAP3 -853097 sc-eQTL 2.11e-01 0.244 0.195 0.054 cDC L2
ENSG00000134686 PHC2 645501 sc-eQTL 3.87e-01 -0.117 0.135 0.054 cDC L2
ENSG00000142920 AZIN2 995449 sc-eQTL 5.84e-01 0.0584 0.107 0.054 cDC L2
ENSG00000160094 ZNF362 820061 sc-eQTL 4.27e-01 -0.148 0.186 0.054 cDC L2
ENSG00000163866 SMIM12 -783202 sc-eQTL 6.71e-01 0.0787 0.185 0.054 cDC L2
ENSG00000163867 ZMYM6 -955392 sc-eQTL 3.33e-01 0.188 0.194 0.054 cDC L2
ENSG00000197056 ZMYM1 -955619 sc-eQTL 7.63e-01 0.0556 0.184 0.054 cDC L2
ENSG00000243749 TMEM35B -908800 sc-eQTL 6.34e-01 0.0865 0.182 0.054 cDC L2
ENSG00000004455 AK2 995557 sc-eQTL 3.83e-01 0.199 0.228 0.055 gdT L2
ENSG00000116525 TRIM62 894494 sc-eQTL 5.75e-01 -0.138 0.245 0.055 gdT L2
ENSG00000116544 DLGAP3 -853097 sc-eQTL 3.07e-01 0.24 0.234 0.055 gdT L2
ENSG00000134686 PHC2 645501 sc-eQTL 8.33e-01 -0.0436 0.206 0.055 gdT L2
ENSG00000142920 AZIN2 995449 sc-eQTL 1.75e-01 0.285 0.209 0.055 gdT L2
ENSG00000160094 ZNF362 820061 sc-eQTL 8.64e-01 -0.0409 0.239 0.055 gdT L2
ENSG00000163866 SMIM12 -783202 sc-eQTL 8.56e-01 -0.0446 0.245 0.055 gdT L2
ENSG00000163867 ZMYM6 -955392 sc-eQTL 9.17e-01 -0.0264 0.254 0.055 gdT L2
ENSG00000197056 ZMYM1 -955619 sc-eQTL 3.94e-01 0.194 0.227 0.055 gdT L2
ENSG00000243749 TMEM35B -908800 sc-eQTL 9.61e-01 -0.00883 0.18 0.055 gdT L2
ENSG00000004455 AK2 995557 sc-eQTL 8.50e-01 -0.0355 0.188 0.051 intMono L2
ENSG00000116525 TRIM62 894494 sc-eQTL 2.77e-01 -0.211 0.194 0.051 intMono L2
ENSG00000116544 DLGAP3 -853097 sc-eQTL 4.86e-01 0.13 0.187 0.051 intMono L2
ENSG00000134686 PHC2 645501 sc-eQTL 9.63e-01 -0.00521 0.112 0.051 intMono L2
ENSG00000160094 ZNF362 820061 sc-eQTL 9.60e-02 -0.331 0.198 0.051 intMono L2
ENSG00000163866 SMIM12 -783202 sc-eQTL 6.66e-01 -0.0825 0.191 0.051 intMono L2
ENSG00000163867 ZMYM6 -955392 sc-eQTL 4.32e-01 0.155 0.197 0.051 intMono L2
ENSG00000197056 ZMYM1 -955619 sc-eQTL 5.18e-01 -0.112 0.174 0.051 intMono L2
ENSG00000243749 TMEM35B -908800 sc-eQTL 2.59e-01 -0.191 0.169 0.051 intMono L2
ENSG00000004455 AK2 995557 sc-eQTL 7.75e-01 0.0525 0.184 0.052 ncMono L2
ENSG00000116525 TRIM62 894494 sc-eQTL 8.69e-01 0.0281 0.17 0.052 ncMono L2
ENSG00000116544 DLGAP3 -853097 sc-eQTL 5.43e-01 0.101 0.165 0.052 ncMono L2
ENSG00000134686 PHC2 645501 sc-eQTL 7.22e-01 0.0463 0.13 0.052 ncMono L2
ENSG00000160094 ZNF362 820061 sc-eQTL 3.54e-01 0.186 0.2 0.052 ncMono L2
ENSG00000163866 SMIM12 -783202 sc-eQTL 8.35e-01 0.0378 0.181 0.052 ncMono L2
ENSG00000163867 ZMYM6 -955392 sc-eQTL 9.12e-01 0.0205 0.187 0.052 ncMono L2
ENSG00000197056 ZMYM1 -955619 sc-eQTL 6.53e-03 0.478 0.174 0.052 ncMono L2
ENSG00000243749 TMEM35B -908800 sc-eQTL 5.22e-01 -0.11 0.172 0.052 ncMono L2
ENSG00000004455 AK2 995557 sc-eQTL 7.53e-03 0.509 0.188 0.062 pDC L2
ENSG00000116525 TRIM62 894494 sc-eQTL 6.55e-01 0.0857 0.192 0.062 pDC L2
ENSG00000116544 DLGAP3 -853097 sc-eQTL 4.21e-01 -0.152 0.188 0.062 pDC L2
ENSG00000134686 PHC2 645501 sc-eQTL 5.64e-02 -0.296 0.154 0.062 pDC L2
ENSG00000142920 AZIN2 995449 sc-eQTL 3.91e-01 0.116 0.134 0.062 pDC L2
ENSG00000160094 ZNF362 820061 sc-eQTL 4.55e-01 0.126 0.168 0.062 pDC L2
ENSG00000163866 SMIM12 -783202 sc-eQTL 3.32e-01 -0.191 0.196 0.062 pDC L2
ENSG00000163867 ZMYM6 -955392 sc-eQTL 6.03e-01 -0.0914 0.175 0.062 pDC L2
ENSG00000197056 ZMYM1 -955619 sc-eQTL 3.22e-01 -0.18 0.181 0.062 pDC L2
ENSG00000243749 TMEM35B -908800 sc-eQTL 1.96e-01 0.208 0.16 0.062 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116525 \N 894494 2.74e-07 1.3e-07 4.48e-08 1.81e-07 9.87e-08 9.76e-08 1.49e-07 5.4e-08 1.45e-07 4.94e-08 1.54e-07 8.55e-08 1.45e-07 6.76e-08 6.04e-08 7.3e-08 3.93e-08 1.33e-07 5.75e-08 4.21e-08 1.13e-07 1.28e-07 1.39e-07 2.95e-08 1.46e-07 1.14e-07 1.07e-07 9.74e-08 1.09e-07 1.02e-07 9.92e-08 3.54e-08 3.56e-08 8e-08 7.02e-08 3.53e-08 5.04e-08 8.93e-08 6.54e-08 3.76e-08 4.88e-08 1.35e-07 5.24e-08 1.26e-08 3.42e-08 1.86e-08 1.19e-07 3.81e-09 4.9e-08
ENSG00000184389 \N 755455 2.77e-07 1.36e-07 5.64e-08 2.05e-07 1.02e-07 8.45e-08 1.67e-07 5.66e-08 1.5e-07 6.4e-08 1.67e-07 1.08e-07 1.71e-07 7.95e-08 5.72e-08 7.23e-08 4.24e-08 1.56e-07 6.92e-08 5.2e-08 1.25e-07 1.26e-07 1.5e-07 3.17e-08 1.65e-07 1.26e-07 1.18e-07 1.06e-07 1.22e-07 9.88e-08 1.06e-07 4.47e-08 3.43e-08 8.89e-08 3.81e-08 3.22e-08 5.74e-08 8.89e-08 6.43e-08 3.75e-08 5.41e-08 1.46e-07 5.27e-08 1.19e-08 3.55e-08 1.71e-08 1.21e-07 1.89e-09 4.99e-08