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Genes within 1Mb (chr1:33891730:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 810734 sc-eQTL 1.70e-01 -0.319 0.231 0.054 B_Activated L2
ENSG00000116514 RNF19B 927045 sc-eQTL 9.66e-01 0.00947 0.221 0.054 B_Activated L2
ENSG00000116525 TRIM62 709671 sc-eQTL 6.29e-01 0.104 0.214 0.054 B_Activated L2
ENSG00000134686 PHC2 460678 sc-eQTL 8.32e-01 -0.0456 0.214 0.054 B_Activated L2
ENSG00000160094 ZNF362 635238 sc-eQTL 4.72e-01 -0.162 0.225 0.054 B_Activated L2
ENSG00000163866 SMIM12 -968025 sc-eQTL 1.02e-01 -0.381 0.232 0.054 B_Activated L2
ENSG00000004455 AK2 810734 sc-eQTL 3.57e-01 -0.196 0.212 0.05 CD8_TEM L2
ENSG00000116514 RNF19B 927045 sc-eQTL 7.58e-02 -0.376 0.211 0.05 CD8_TEM L2
ENSG00000116525 TRIM62 709671 sc-eQTL 3.25e-01 0.217 0.22 0.05 CD8_TEM L2
ENSG00000134686 PHC2 460678 sc-eQTL 9.95e-01 0.00138 0.206 0.05 CD8_TEM L2
ENSG00000142920 AZIN2 810626 sc-eQTL 6.31e-01 -0.0892 0.185 0.05 CD8_TEM L2
ENSG00000160094 ZNF362 635238 sc-eQTL 2.07e-01 0.264 0.208 0.05 CD8_TEM L2
ENSG00000163866 SMIM12 -968025 sc-eQTL 4.93e-01 0.148 0.215 0.05 CD8_TEM L2
ENSG00000004455 AK2 810734 sc-eQTL 5.20e-01 0.147 0.229 0.052 gdT L2
ENSG00000116514 RNF19B 927045 sc-eQTL 4.56e-01 0.157 0.21 0.052 gdT L2
ENSG00000116525 TRIM62 709671 sc-eQTL 6.15e-01 -0.124 0.246 0.052 gdT L2
ENSG00000134686 PHC2 460678 sc-eQTL 3.10e-02 -0.442 0.203 0.052 gdT L2
ENSG00000142920 AZIN2 810626 sc-eQTL 1.20e-01 0.328 0.209 0.052 gdT L2
ENSG00000160094 ZNF362 635238 sc-eQTL 2.62e-01 -0.268 0.238 0.052 gdT L2
ENSG00000163866 SMIM12 -968025 sc-eQTL 6.13e-01 0.124 0.245 0.052 gdT L2
ENSG00000004455 AK2 810734 sc-eQTL 6.11e-01 0.116 0.228 0.051 pDC L2
ENSG00000116514 RNF19B 927045 sc-eQTL 5.08e-01 0.152 0.229 0.051 pDC L2
ENSG00000116525 TRIM62 709671 sc-eQTL 1.35e-01 -0.34 0.226 0.051 pDC L2
ENSG00000134686 PHC2 460678 sc-eQTL 4.91e-01 -0.127 0.185 0.051 pDC L2
ENSG00000142920 AZIN2 810626 sc-eQTL 1.89e-01 0.21 0.159 0.051 pDC L2
ENSG00000160094 ZNF362 635238 sc-eQTL 8.80e-01 -0.03 0.199 0.051 pDC L2
ENSG00000163866 SMIM12 -968025 sc-eQTL 2.59e-01 -0.263 0.233 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000187513 GJA4 -901269 eQTL 0.0406 -0.146 0.0712 0.00126 0.0 0.0363
ENSG00000222112 RN7SKP16 554866 eQTL 0.0228 -0.142 0.0622 0.00157 0.0 0.0363

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000222112 RN7SKP16 554866 3.71e-07 2.67e-07 8.9e-08 3.19e-07 1.09e-07 1.19e-07 3.33e-07 6.57e-08 2.56e-07 1.46e-07 3.21e-07 1.72e-07 4.88e-07 9.48e-08 7.98e-08 1.17e-07 8.53e-08 2.75e-07 9.97e-08 8.86e-08 1.65e-07 2.07e-07 2.04e-07 5.11e-08 3.98e-07 1.76e-07 1.74e-07 1.77e-07 1.48e-07 2.75e-07 1.93e-07 7.33e-08 4.87e-08 1.19e-07 1.27e-07 6.94e-08 9.11e-08 6.2e-08 5.62e-08 7.77e-08 4.9e-08 3.43e-07 1.21e-08 2.02e-08 1.33e-07 1.37e-08 9.07e-08 0.0 5.58e-08