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Genes within 1Mb (chr1:33754780:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 673784 sc-eQTL 7.26e-01 0.0703 0.201 0.05 CD4_CTL L2
ENSG00000116497 S100PBP 938013 sc-eQTL 9.95e-01 -0.00122 0.201 0.05 CD4_CTL L2
ENSG00000116514 RNF19B 790095 sc-eQTL 1.29e-01 0.294 0.193 0.05 CD4_CTL L2
ENSG00000116525 TRIM62 572721 sc-eQTL 6.55e-01 -0.0877 0.196 0.05 CD4_CTL L2
ENSG00000134684 YARS 936627 sc-eQTL 2.46e-01 -0.227 0.195 0.05 CD4_CTL L2
ENSG00000134686 PHC2 323728 sc-eQTL 6.35e-03 0.503 0.182 0.05 CD4_CTL L2
ENSG00000142920 AZIN2 673676 sc-eQTL 5.65e-01 0.11 0.191 0.05 CD4_CTL L2
ENSG00000160094 ZNF362 498288 sc-eQTL 4.26e-01 -0.157 0.196 0.05 CD4_CTL L2
ENSG00000004455 AK2 673784 sc-eQTL 1.03e-01 -0.349 0.213 0.05 CD8_TEM L2
ENSG00000116497 S100PBP 938013 sc-eQTL 5.37e-01 -0.126 0.205 0.05 CD8_TEM L2
ENSG00000116514 RNF19B 790095 sc-eQTL 1.51e-01 -0.306 0.213 0.05 CD8_TEM L2
ENSG00000116525 TRIM62 572721 sc-eQTL 6.55e-01 0.099 0.222 0.05 CD8_TEM L2
ENSG00000134684 YARS 936627 sc-eQTL 5.72e-01 -0.106 0.187 0.05 CD8_TEM L2
ENSG00000134686 PHC2 323728 sc-eQTL 7.08e-01 0.078 0.208 0.05 CD8_TEM L2
ENSG00000142920 AZIN2 673676 sc-eQTL 7.44e-01 -0.0611 0.187 0.05 CD8_TEM L2
ENSG00000160094 ZNF362 498288 sc-eQTL 9.49e-01 -0.0134 0.21 0.05 CD8_TEM L2
ENSG00000004455 AK2 673784 sc-eQTL 4.88e-01 -0.142 0.205 0.05 NK_HLA L2
ENSG00000116497 S100PBP 938013 sc-eQTL 9.81e-01 -0.00459 0.197 0.05 NK_HLA L2
ENSG00000116514 RNF19B 790095 sc-eQTL 4.37e-01 0.153 0.196 0.05 NK_HLA L2
ENSG00000116525 TRIM62 572721 sc-eQTL 3.46e-01 -0.195 0.207 0.05 NK_HLA L2
ENSG00000134684 YARS 936627 sc-eQTL 7.90e-01 -0.0583 0.218 0.05 NK_HLA L2
ENSG00000134686 PHC2 323728 sc-eQTL 6.26e-01 0.0883 0.181 0.05 NK_HLA L2
ENSG00000160094 ZNF362 498288 sc-eQTL 1.78e-01 -0.278 0.206 0.05 NK_HLA L2
ENSG00000004455 AK2 673784 sc-eQTL 5.68e-01 -0.134 0.235 0.052 PB L2
ENSG00000116497 S100PBP 938013 sc-eQTL 2.60e-01 0.287 0.254 0.052 PB L2
ENSG00000116514 RNF19B 790095 sc-eQTL 7.94e-01 0.0697 0.266 0.052 PB L2
ENSG00000116525 TRIM62 572721 sc-eQTL 9.96e-02 0.429 0.258 0.052 PB L2
ENSG00000134684 YARS 936627 sc-eQTL 6.57e-02 -0.344 0.185 0.052 PB L2
ENSG00000134686 PHC2 323728 sc-eQTL 1.31e-03 0.825 0.25 0.052 PB L2
ENSG00000160094 ZNF362 498288 sc-eQTL 7.24e-01 -0.0961 0.272 0.052 PB L2
ENSG00000004455 AK2 673784 sc-eQTL 8.67e-01 0.037 0.22 0.051 pDC L2
ENSG00000116497 S100PBP 938013 sc-eQTL 9.47e-01 0.0122 0.182 0.051 pDC L2
ENSG00000116514 RNF19B 790095 sc-eQTL 5.00e-01 0.15 0.221 0.051 pDC L2
ENSG00000116525 TRIM62 572721 sc-eQTL 7.65e-01 -0.0656 0.22 0.051 pDC L2
ENSG00000134684 YARS 936627 sc-eQTL 3.62e-01 0.203 0.222 0.051 pDC L2
ENSG00000134686 PHC2 323728 sc-eQTL 3.87e-01 -0.155 0.178 0.051 pDC L2
ENSG00000142920 AZIN2 673676 sc-eQTL 4.95e-01 -0.106 0.154 0.051 pDC L2
ENSG00000160094 ZNF362 498288 sc-eQTL 5.77e-01 -0.107 0.192 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116497 S100PBP 938013 eQTL 0.291 -0.0303 0.0286 0.00129 0.0 0.0608
ENSG00000225313 AL513327.1 447432 eQTL 0.0305 0.0697 0.0322 0.00161 0.0 0.0608

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina