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Genes within 1Mb (chr1:33752177:CA:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 671181 sc-eQTL 7.26e-01 0.0703 0.201 0.05 CD4_CTL L2
ENSG00000116497 S100PBP 935410 sc-eQTL 9.95e-01 -0.00122 0.201 0.05 CD4_CTL L2
ENSG00000116514 RNF19B 787492 sc-eQTL 1.29e-01 0.294 0.193 0.05 CD4_CTL L2
ENSG00000116525 TRIM62 570118 sc-eQTL 6.55e-01 -0.0877 0.196 0.05 CD4_CTL L2
ENSG00000134684 YARS 934024 sc-eQTL 2.46e-01 -0.227 0.195 0.05 CD4_CTL L2
ENSG00000134686 PHC2 321125 sc-eQTL 6.35e-03 0.503 0.182 0.05 CD4_CTL L2
ENSG00000142920 AZIN2 671073 sc-eQTL 5.65e-01 0.11 0.191 0.05 CD4_CTL L2
ENSG00000160094 ZNF362 495685 sc-eQTL 4.26e-01 -0.157 0.196 0.05 CD4_CTL L2
ENSG00000004455 AK2 671181 sc-eQTL 1.03e-01 -0.349 0.213 0.05 CD8_TEM L2
ENSG00000116497 S100PBP 935410 sc-eQTL 5.37e-01 -0.126 0.205 0.05 CD8_TEM L2
ENSG00000116514 RNF19B 787492 sc-eQTL 1.51e-01 -0.306 0.213 0.05 CD8_TEM L2
ENSG00000116525 TRIM62 570118 sc-eQTL 6.55e-01 0.099 0.222 0.05 CD8_TEM L2
ENSG00000134684 YARS 934024 sc-eQTL 5.72e-01 -0.106 0.187 0.05 CD8_TEM L2
ENSG00000134686 PHC2 321125 sc-eQTL 7.08e-01 0.078 0.208 0.05 CD8_TEM L2
ENSG00000142920 AZIN2 671073 sc-eQTL 7.44e-01 -0.0611 0.187 0.05 CD8_TEM L2
ENSG00000160094 ZNF362 495685 sc-eQTL 9.49e-01 -0.0134 0.21 0.05 CD8_TEM L2
ENSG00000004455 AK2 671181 sc-eQTL 4.88e-01 -0.142 0.205 0.05 NK_HLA L2
ENSG00000116497 S100PBP 935410 sc-eQTL 9.81e-01 -0.00459 0.197 0.05 NK_HLA L2
ENSG00000116514 RNF19B 787492 sc-eQTL 4.37e-01 0.153 0.196 0.05 NK_HLA L2
ENSG00000116525 TRIM62 570118 sc-eQTL 3.46e-01 -0.195 0.207 0.05 NK_HLA L2
ENSG00000134684 YARS 934024 sc-eQTL 7.90e-01 -0.0583 0.218 0.05 NK_HLA L2
ENSG00000134686 PHC2 321125 sc-eQTL 6.26e-01 0.0883 0.181 0.05 NK_HLA L2
ENSG00000160094 ZNF362 495685 sc-eQTL 1.78e-01 -0.278 0.206 0.05 NK_HLA L2
ENSG00000004455 AK2 671181 sc-eQTL 5.68e-01 -0.134 0.235 0.052 PB L2
ENSG00000116497 S100PBP 935410 sc-eQTL 2.60e-01 0.287 0.254 0.052 PB L2
ENSG00000116514 RNF19B 787492 sc-eQTL 7.94e-01 0.0697 0.266 0.052 PB L2
ENSG00000116525 TRIM62 570118 sc-eQTL 9.96e-02 0.429 0.258 0.052 PB L2
ENSG00000134684 YARS 934024 sc-eQTL 6.57e-02 -0.344 0.185 0.052 PB L2
ENSG00000134686 PHC2 321125 sc-eQTL 1.31e-03 0.825 0.25 0.052 PB L2
ENSG00000160094 ZNF362 495685 sc-eQTL 7.24e-01 -0.0961 0.272 0.052 PB L2
ENSG00000004455 AK2 671181 sc-eQTL 8.67e-01 0.037 0.22 0.051 pDC L2
ENSG00000116497 S100PBP 935410 sc-eQTL 9.47e-01 0.0122 0.182 0.051 pDC L2
ENSG00000116514 RNF19B 787492 sc-eQTL 5.00e-01 0.15 0.221 0.051 pDC L2
ENSG00000116525 TRIM62 570118 sc-eQTL 7.65e-01 -0.0656 0.22 0.051 pDC L2
ENSG00000134684 YARS 934024 sc-eQTL 3.62e-01 0.203 0.222 0.051 pDC L2
ENSG00000134686 PHC2 321125 sc-eQTL 3.87e-01 -0.155 0.178 0.051 pDC L2
ENSG00000142920 AZIN2 671073 sc-eQTL 4.95e-01 -0.106 0.154 0.051 pDC L2
ENSG00000160094 ZNF362 495685 sc-eQTL 5.77e-01 -0.107 0.192 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116497 S100PBP 935410 eQTL 0.294 -0.0298 0.0283 0.00127 0.0 0.0613
ENSG00000225313 AL513327.1 444829 eQTL 0.0395 0.0657 0.0319 0.00133 0.0 0.0613

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina