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Genes within 1Mb (chr1:33688215:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 607219 sc-eQTL 4.99e-01 0.118 0.175 0.05 CD4_CTL L2
ENSG00000116497 S100PBP 871448 sc-eQTL 4.61e-01 0.129 0.175 0.05 CD4_CTL L2
ENSG00000116514 RNF19B 723530 sc-eQTL 3.05e-01 -0.174 0.169 0.05 CD4_CTL L2
ENSG00000116525 TRIM62 506156 sc-eQTL 8.16e-01 -0.0399 0.171 0.05 CD4_CTL L2
ENSG00000134684 YARS 870062 sc-eQTL 8.43e-01 0.0339 0.171 0.05 CD4_CTL L2
ENSG00000134686 PHC2 257163 sc-eQTL 4.56e-01 0.121 0.162 0.05 CD4_CTL L2
ENSG00000142920 AZIN2 607111 sc-eQTL 8.53e-01 0.0309 0.166 0.05 CD4_CTL L2
ENSG00000160094 ZNF362 431723 sc-eQTL 1.35e-01 0.256 0.171 0.05 CD4_CTL L2
ENSG00000162520 SYNC 984619 sc-eQTL 7.90e-01 -0.0493 0.185 0.05 CD4_CTL L2
ENSG00000004455 AK2 607219 sc-eQTL 9.74e-01 0.0061 0.184 0.05 CD8_TEM L2
ENSG00000116497 S100PBP 871448 sc-eQTL 7.82e-01 0.0489 0.176 0.05 CD8_TEM L2
ENSG00000116514 RNF19B 723530 sc-eQTL 4.53e-01 0.138 0.184 0.05 CD8_TEM L2
ENSG00000116525 TRIM62 506156 sc-eQTL 8.11e-01 -0.0458 0.191 0.05 CD8_TEM L2
ENSG00000134684 YARS 870062 sc-eQTL 5.57e-01 0.0944 0.161 0.05 CD8_TEM L2
ENSG00000134686 PHC2 257163 sc-eQTL 2.72e-01 0.197 0.178 0.05 CD8_TEM L2
ENSG00000142920 AZIN2 607111 sc-eQTL 7.77e-01 -0.0456 0.161 0.05 CD8_TEM L2
ENSG00000160094 ZNF362 431723 sc-eQTL 1.79e-01 0.243 0.18 0.05 CD8_TEM L2
ENSG00000162520 SYNC 984619 sc-eQTL 8.83e-01 0.0264 0.18 0.05 CD8_TEM L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121903 ZSCAN20 215570 eQTL 0.00502 0.21 0.0747 0.00281 0.00163 0.0334
ENSG00000278966 AL031602.1 714662 eQTL 0.00725 -0.261 0.0969 0.0 0.0 0.0334

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162520 \N 984619 2.67e-07 1.3e-07 4.98e-08 1.86e-07 9.79e-08 9.9e-08 1.61e-07 5.53e-08 1.45e-07 5.67e-08 1.52e-07 1.01e-07 1.52e-07 7.13e-08 5.91e-08 7.5e-08 4.09e-08 1.33e-07 5.97e-08 4.31e-08 1.21e-07 1.24e-07 1.45e-07 2.93e-08 1.5e-07 1.25e-07 1.07e-07 9.74e-08 1.16e-07 1.07e-07 9.92e-08 3.65e-08 3.66e-08 8.23e-08 6.67e-08 3.53e-08 4.99e-08 9.36e-08 6.37e-08 3.8e-08 5.43e-08 1.36e-07 5.22e-08 2.33e-08 5.15e-08 1.84e-08 1.19e-07 3.81e-09 4.88e-08