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Genes within 1Mb (chr1:33515587:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 434591 sc-eQTL 1.09e-01 -0.339 0.21 0.051 B_Activated L2
ENSG00000116497 S100PBP 698820 sc-eQTL 4.27e-01 0.159 0.2 0.051 B_Activated L2
ENSG00000116514 RNF19B 550902 sc-eQTL 9.38e-01 -0.0157 0.201 0.051 B_Activated L2
ENSG00000116525 TRIM62 333528 sc-eQTL 3.79e-01 -0.172 0.195 0.051 B_Activated L2
ENSG00000134684 YARS 697434 sc-eQTL 2.06e-01 -0.265 0.209 0.051 B_Activated L2
ENSG00000134686 PHC2 84535 sc-eQTL 3.44e-01 -0.185 0.195 0.051 B_Activated L2
ENSG00000160094 ZNF362 259095 sc-eQTL 8.85e-01 -0.0299 0.206 0.051 B_Activated L2
ENSG00000162520 SYNC 811991 sc-eQTL 4.29e-01 0.167 0.211 0.051 B_Activated L2
ENSG00000162521 RBBP4 864445 sc-eQTL 8.45e-01 0.0401 0.205 0.051 B_Activated L2
ENSG00000176261 ZBTB8OS 864684 sc-eQTL 4.40e-01 0.15 0.194 0.051 B_Activated L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116514 RNF19B 550902 eQTL 0.0158 -0.0863 0.0357 0.0 0.0 0.0554
ENSG00000134686 PHC2 84535 eQTL 0.0188 -0.0411 0.0175 0.00159 0.0 0.0554
ENSG00000184389 A3GALT2 194489 eQTL 0.00416 0.179 0.0622 0.0 0.0 0.0554
ENSG00000225313 AL513327.1 208239 eQTL 0.05 -0.0615 0.0313 0.0342 0.00758 0.0554

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116514 RNF19B 550902 6.09e-07 3.12e-07 1.08e-07 2.87e-07 1.08e-07 1.5e-07 3.7e-07 9.78e-08 2.75e-07 1.7e-07 3.32e-07 2.33e-07 4.54e-07 9.15e-08 1.24e-07 1.75e-07 1.69e-07 3.12e-07 1.5e-07 8.86e-08 1.76e-07 2.76e-07 2.63e-07 1.06e-07 4.11e-07 2.36e-07 2.08e-07 1.86e-07 2.57e-07 2.75e-07 1.93e-07 7.6e-08 5.38e-08 1.27e-07 1.97e-07 8.75e-08 7.74e-08 7.75e-08 5.89e-08 5.72e-08 7.16e-08 2.74e-07 1.6e-08 1.99e-08 1.01e-07 1.37e-08 9.73e-08 3.14e-09 5.05e-08
ENSG00000184389 A3GALT2 194489 2.48e-06 2.59e-06 4.85e-07 1.7e-06 6.09e-07 8.11e-07 1.59e-06 8.51e-07 1.95e-06 9.51e-07 2.35e-06 1.33e-06 3.53e-06 1.15e-06 8.59e-07 1.66e-06 1.24e-06 2.29e-06 1.15e-06 1.42e-06 1.26e-06 3.01e-06 2.23e-06 1.17e-06 3.25e-06 1.03e-06 1.36e-06 1.74e-06 2.2e-06 1.87e-06 1.53e-06 3.97e-07 6.11e-07 1.25e-06 1.09e-06 9.4e-07 7.8e-07 4.46e-07 1.12e-06 4.35e-07 2.8e-07 3.06e-06 5.58e-07 1.81e-07 3.61e-07 3.14e-07 8.02e-07 2e-07 1.76e-07