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Genes within 1Mb (chr1:33387857:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 306861 sc-eQTL 2.17e-01 0.278 0.224 0.051 B_Activated L2
ENSG00000116497 S100PBP 571090 sc-eQTL 9.39e-01 -0.0162 0.213 0.051 B_Activated L2
ENSG00000116514 RNF19B 423172 sc-eQTL 9.04e-01 -0.0259 0.214 0.051 B_Activated L2
ENSG00000116525 TRIM62 205798 sc-eQTL 7.43e-02 0.369 0.205 0.051 B_Activated L2
ENSG00000134684 YARS 569704 sc-eQTL 2.88e-01 0.237 0.222 0.051 B_Activated L2
ENSG00000134686 PHC2 -43195 sc-eQTL 4.98e-01 0.14 0.207 0.051 B_Activated L2
ENSG00000160058 BSDC1 993126 sc-eQTL 7.89e-01 0.0613 0.229 0.051 B_Activated L2
ENSG00000160094 ZNF362 131365 sc-eQTL 7.49e-01 -0.07 0.218 0.051 B_Activated L2
ENSG00000162520 SYNC 684261 sc-eQTL 1.60e-01 0.315 0.223 0.051 B_Activated L2
ENSG00000162521 RBBP4 736715 sc-eQTL 2.97e-01 0.227 0.216 0.051 B_Activated L2
ENSG00000176261 ZBTB8OS 736954 sc-eQTL 1.82e-01 0.275 0.205 0.051 B_Activated L2
ENSG00000004455 AK2 306861 sc-eQTL 1.54e-01 -0.272 0.19 0.05 CD4_CTL L2
ENSG00000116497 S100PBP 571090 sc-eQTL 9.44e-01 -0.0133 0.191 0.05 CD4_CTL L2
ENSG00000116514 RNF19B 423172 sc-eQTL 2.57e-01 0.21 0.184 0.05 CD4_CTL L2
ENSG00000116525 TRIM62 205798 sc-eQTL 7.07e-01 0.0702 0.187 0.05 CD4_CTL L2
ENSG00000134684 YARS 569704 sc-eQTL 2.60e-01 0.21 0.186 0.05 CD4_CTL L2
ENSG00000134686 PHC2 -43195 sc-eQTL 6.46e-01 0.0813 0.177 0.05 CD4_CTL L2
ENSG00000142920 AZIN2 306753 sc-eQTL 6.57e-01 -0.0807 0.182 0.05 CD4_CTL L2
ENSG00000160058 BSDC1 993126 sc-eQTL 7.53e-01 0.0615 0.196 0.05 CD4_CTL L2
ENSG00000160094 ZNF362 131365 sc-eQTL 4.28e-01 -0.148 0.187 0.05 CD4_CTL L2
ENSG00000162520 SYNC 684261 sc-eQTL 9.03e-02 -0.341 0.2 0.05 CD4_CTL L2
ENSG00000162521 RBBP4 736715 sc-eQTL 3.31e-01 -0.177 0.181 0.05 CD4_CTL L2
ENSG00000176261 ZBTB8OS 736954 sc-eQTL 2.62e-01 -0.218 0.194 0.05 CD4_CTL L2
ENSG00000004455 AK2 306861 sc-eQTL 5.24e-01 -0.126 0.198 0.053 CD8_TEM L2
ENSG00000116497 S100PBP 571090 sc-eQTL 5.14e-01 -0.124 0.189 0.053 CD8_TEM L2
ENSG00000116514 RNF19B 423172 sc-eQTL 9.66e-01 -0.00832 0.198 0.053 CD8_TEM L2
ENSG00000116525 TRIM62 205798 sc-eQTL 3.47e-01 0.193 0.205 0.053 CD8_TEM L2
ENSG00000134684 YARS 569704 sc-eQTL 7.56e-01 -0.0538 0.173 0.053 CD8_TEM L2
ENSG00000134686 PHC2 -43195 sc-eQTL 6.28e-01 0.0932 0.192 0.053 CD8_TEM L2
ENSG00000142920 AZIN2 306753 sc-eQTL 9.48e-01 0.0112 0.173 0.053 CD8_TEM L2
ENSG00000160058 BSDC1 993126 sc-eQTL 9.68e-01 0.00804 0.203 0.053 CD8_TEM L2
ENSG00000160094 ZNF362 131365 sc-eQTL 2.43e-02 -0.436 0.192 0.053 CD8_TEM L2
ENSG00000162520 SYNC 684261 sc-eQTL 8.96e-01 0.0253 0.193 0.053 CD8_TEM L2
ENSG00000162521 RBBP4 736715 sc-eQTL 6.22e-01 -0.0853 0.173 0.053 CD8_TEM L2
ENSG00000176261 ZBTB8OS 736954 sc-eQTL 8.63e-01 0.0305 0.177 0.053 CD8_TEM L2
ENSG00000004455 AK2 306861 sc-eQTL 4.50e-01 -0.152 0.2 0.051 NK_CD56bright L2
ENSG00000116497 S100PBP 571090 sc-eQTL 8.46e-01 -0.0376 0.193 0.051 NK_CD56bright L2
ENSG00000116514 RNF19B 423172 sc-eQTL 4.11e-01 -0.154 0.187 0.051 NK_CD56bright L2
ENSG00000116525 TRIM62 205798 sc-eQTL 7.07e-02 0.361 0.199 0.051 NK_CD56bright L2
ENSG00000134684 YARS 569704 sc-eQTL 3.94e-01 -0.154 0.18 0.051 NK_CD56bright L2
ENSG00000134686 PHC2 -43195 sc-eQTL 1.21e-01 -0.28 0.18 0.051 NK_CD56bright L2
ENSG00000160058 BSDC1 993126 sc-eQTL 1.42e-01 0.296 0.201 0.051 NK_CD56bright L2
ENSG00000160094 ZNF362 131365 sc-eQTL 1.10e-01 0.329 0.205 0.051 NK_CD56bright L2
ENSG00000162520 SYNC 684261 sc-eQTL 7.46e-01 -0.0619 0.19 0.051 NK_CD56bright L2
ENSG00000162521 RBBP4 736715 sc-eQTL 2.39e-01 0.219 0.186 0.051 NK_CD56bright L2
ENSG00000176261 ZBTB8OS 736954 sc-eQTL 5.49e-01 -0.109 0.182 0.051 NK_CD56bright L2
ENSG00000004455 AK2 306861 sc-eQTL 5.82e-01 0.118 0.213 0.056 PB L2
ENSG00000116497 S100PBP 571090 sc-eQTL 1.56e-01 0.327 0.229 0.056 PB L2
ENSG00000116514 RNF19B 423172 sc-eQTL 7.32e-02 0.431 0.238 0.056 PB L2
ENSG00000116525 TRIM62 205798 sc-eQTL 5.41e-01 0.145 0.237 0.056 PB L2
ENSG00000134684 YARS 569704 sc-eQTL 3.89e-01 -0.147 0.17 0.056 PB L2
ENSG00000134686 PHC2 -43195 sc-eQTL 6.01e-01 -0.124 0.237 0.056 PB L2
ENSG00000160058 BSDC1 993126 sc-eQTL 5.52e-01 0.16 0.268 0.056 PB L2
ENSG00000160094 ZNF362 131365 sc-eQTL 1.83e-01 -0.328 0.244 0.056 PB L2
ENSG00000162520 SYNC 684261 sc-eQTL 2.07e-01 0.245 0.193 0.056 PB L2
ENSG00000162521 RBBP4 736715 sc-eQTL 7.22e-02 0.306 0.169 0.056 PB L2
ENSG00000176261 ZBTB8OS 736954 sc-eQTL 8.53e-01 0.0266 0.143 0.056 PB L2
ENSG00000004455 AK2 306861 sc-eQTL 1.41e-01 -0.354 0.239 0.055 gdT L2
ENSG00000116497 S100PBP 571090 sc-eQTL 2.18e-01 0.276 0.223 0.055 gdT L2
ENSG00000116514 RNF19B 423172 sc-eQTL 6.89e-02 -0.4 0.218 0.055 gdT L2
ENSG00000116525 TRIM62 205798 sc-eQTL 5.38e-01 0.16 0.259 0.055 gdT L2
ENSG00000134684 YARS 569704 sc-eQTL 2.90e-01 -0.262 0.246 0.055 gdT L2
ENSG00000134686 PHC2 -43195 sc-eQTL 1.26e-01 -0.331 0.215 0.055 gdT L2
ENSG00000142920 AZIN2 306753 sc-eQTL 6.85e-01 0.0904 0.222 0.055 gdT L2
ENSG00000160058 BSDC1 993126 sc-eQTL 5.27e-01 0.159 0.25 0.055 gdT L2
ENSG00000160094 ZNF362 131365 sc-eQTL 7.47e-01 0.0812 0.251 0.055 gdT L2
ENSG00000162520 SYNC 684261 sc-eQTL 2.26e-01 -0.294 0.242 0.055 gdT L2
ENSG00000162521 RBBP4 736715 sc-eQTL 8.85e-01 0.0338 0.234 0.055 gdT L2
ENSG00000176261 ZBTB8OS 736954 sc-eQTL 2.95e-01 0.267 0.254 0.055 gdT L2
ENSG00000004455 AK2 306861 sc-eQTL 3.03e-01 0.196 0.19 0.052 ncMono L2
ENSG00000116497 S100PBP 571090 sc-eQTL 8.48e-01 -0.0333 0.174 0.052 ncMono L2
ENSG00000116514 RNF19B 423172 sc-eQTL 1.87e-01 0.234 0.177 0.052 ncMono L2
ENSG00000116525 TRIM62 205798 sc-eQTL 5.82e-01 0.0973 0.176 0.052 ncMono L2
ENSG00000134684 YARS 569704 sc-eQTL 4.87e-01 0.137 0.196 0.052 ncMono L2
ENSG00000134686 PHC2 -43195 sc-eQTL 9.39e-01 0.0103 0.135 0.052 ncMono L2
ENSG00000160058 BSDC1 993126 sc-eQTL 6.28e-02 -0.359 0.192 0.052 ncMono L2
ENSG00000160094 ZNF362 131365 sc-eQTL 7.04e-01 -0.0788 0.207 0.052 ncMono L2
ENSG00000162520 SYNC 684261 sc-eQTL 8.33e-01 -0.0397 0.189 0.052 ncMono L2
ENSG00000162521 RBBP4 736715 sc-eQTL 3.27e-01 0.18 0.184 0.052 ncMono L2
ENSG00000162522 KIAA1522 646027 sc-eQTL 8.73e-01 -0.0292 0.182 0.052 ncMono L2
ENSG00000176261 ZBTB8OS 736954 sc-eQTL 6.58e-01 -0.0751 0.169 0.052 ncMono L2
ENSG00000004455 AK2 306861 sc-eQTL 5.04e-01 0.143 0.214 0.054 pDC L2
ENSG00000116497 S100PBP 571090 sc-eQTL 7.01e-01 -0.0678 0.176 0.054 pDC L2
ENSG00000116514 RNF19B 423172 sc-eQTL 7.77e-01 0.061 0.216 0.054 pDC L2
ENSG00000116525 TRIM62 205798 sc-eQTL 4.53e-01 -0.16 0.213 0.054 pDC L2
ENSG00000134684 YARS 569704 sc-eQTL 6.37e-01 -0.102 0.216 0.054 pDC L2
ENSG00000134686 PHC2 -43195 sc-eQTL 5.67e-02 -0.33 0.172 0.054 pDC L2
ENSG00000142920 AZIN2 306753 sc-eQTL 9.61e-01 -0.00741 0.15 0.054 pDC L2
ENSG00000160058 BSDC1 993126 sc-eQTL 6.94e-01 0.0815 0.207 0.054 pDC L2
ENSG00000160062 ZBTB8A 848430 sc-eQTL 3.64e-02 0.382 0.181 0.054 pDC L2
ENSG00000160094 ZNF362 131365 sc-eQTL 5.72e-01 0.106 0.187 0.054 pDC L2
ENSG00000162520 SYNC 684261 sc-eQTL 8.81e-01 0.0291 0.194 0.054 pDC L2
ENSG00000162521 RBBP4 736715 sc-eQTL 6.29e-01 0.0683 0.141 0.054 pDC L2
ENSG00000162522 KIAA1522 646027 sc-eQTL 8.80e-01 -0.0298 0.197 0.054 pDC L2
ENSG00000176261 ZBTB8OS 736954 sc-eQTL 9.63e-01 0.00958 0.206 0.054 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116497 S100PBP 571090 eQTL 0.000299 0.12 0.0332 0.00564 0.0 0.0417
ENSG00000116525 TRIM62 205798 eQTL 0.00483 0.111 0.0393 0.0 0.0 0.0417
ENSG00000184389 A3GALT2 66759 eQTL 0.0481 -0.148 0.0747 0.0 0.0 0.0417
ENSG00000279179 AL662907.2 225006 eQTL 0.152 0.0669 0.0467 0.00122 0.0 0.0417

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000160097 \N 515375 1.28e-06 2.11e-06 1.76e-07 7.82e-07 1.07e-07 5.63e-07 1.33e-06 2.28e-07 8.29e-07 3.17e-07 1.84e-06 5.95e-07 2.79e-06 4.13e-07 5.34e-07 3.41e-07 6.44e-07 6.13e-07 3.01e-07 1.55e-07 2.54e-07 1.7e-06 8.31e-07 1.63e-07 2.05e-06 2.57e-07 4.71e-07 2.63e-07 1.07e-06 1.09e-06 8.51e-07 4.4e-08 5.42e-08 2.31e-07 4.66e-07 3.32e-07 1.1e-07 7.62e-08 8.72e-08 2.59e-08 4.47e-08 5.66e-06 6.11e-08 1.38e-08 7.26e-08 4.33e-08 7.12e-08 2.2e-09 4.59e-08
ENSG00000278997 \N 244627 4.18e-06 5.54e-06 3.27e-07 1.96e-06 4.13e-07 8.89e-07 2.41e-06 4.39e-07 1.88e-06 8.51e-07 4.16e-06 1.25e-06 7.51e-06 2.04e-06 1.22e-06 1.15e-06 1.56e-06 2.15e-06 9.86e-07 6.49e-07 1.11e-06 4.05e-06 3.54e-06 8.07e-07 4.51e-06 1.2e-06 1.19e-06 1.07e-06 3.52e-06 2.56e-06 2.53e-06 9.54e-08 3.44e-07 5.83e-07 1.61e-06 7.45e-07 7.36e-07 3.65e-07 6.01e-07 2.11e-07 1.85e-07 1.33e-05 5.92e-07 1.87e-08 1.69e-07 2.94e-07 2.26e-07 7.69e-08 1.57e-07