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Genes within 1Mb (chr1:33365283:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 284287 sc-eQTL 2.17e-01 0.278 0.224 0.051 B_Activated L2
ENSG00000116497 S100PBP 548516 sc-eQTL 9.39e-01 -0.0162 0.213 0.051 B_Activated L2
ENSG00000116514 RNF19B 400598 sc-eQTL 9.04e-01 -0.0259 0.214 0.051 B_Activated L2
ENSG00000116525 TRIM62 183224 sc-eQTL 7.43e-02 0.369 0.205 0.051 B_Activated L2
ENSG00000134684 YARS 547130 sc-eQTL 2.88e-01 0.237 0.222 0.051 B_Activated L2
ENSG00000134686 PHC2 -65769 sc-eQTL 4.98e-01 0.14 0.207 0.051 B_Activated L2
ENSG00000160058 BSDC1 970552 sc-eQTL 7.89e-01 0.0613 0.229 0.051 B_Activated L2
ENSG00000160094 ZNF362 108791 sc-eQTL 7.49e-01 -0.07 0.218 0.051 B_Activated L2
ENSG00000162520 SYNC 661687 sc-eQTL 1.60e-01 0.315 0.223 0.051 B_Activated L2
ENSG00000162521 RBBP4 714141 sc-eQTL 2.97e-01 0.227 0.216 0.051 B_Activated L2
ENSG00000176261 ZBTB8OS 714380 sc-eQTL 1.82e-01 0.275 0.205 0.051 B_Activated L2
ENSG00000004455 AK2 284287 sc-eQTL 1.54e-01 -0.272 0.19 0.05 CD4_CTL L2
ENSG00000116497 S100PBP 548516 sc-eQTL 9.44e-01 -0.0133 0.191 0.05 CD4_CTL L2
ENSG00000116514 RNF19B 400598 sc-eQTL 2.57e-01 0.21 0.184 0.05 CD4_CTL L2
ENSG00000116525 TRIM62 183224 sc-eQTL 7.07e-01 0.0702 0.187 0.05 CD4_CTL L2
ENSG00000134684 YARS 547130 sc-eQTL 2.60e-01 0.21 0.186 0.05 CD4_CTL L2
ENSG00000134686 PHC2 -65769 sc-eQTL 6.46e-01 0.0813 0.177 0.05 CD4_CTL L2
ENSG00000142920 AZIN2 284179 sc-eQTL 6.57e-01 -0.0807 0.182 0.05 CD4_CTL L2
ENSG00000160058 BSDC1 970552 sc-eQTL 7.53e-01 0.0615 0.196 0.05 CD4_CTL L2
ENSG00000160094 ZNF362 108791 sc-eQTL 4.28e-01 -0.148 0.187 0.05 CD4_CTL L2
ENSG00000162520 SYNC 661687 sc-eQTL 9.03e-02 -0.341 0.2 0.05 CD4_CTL L2
ENSG00000162521 RBBP4 714141 sc-eQTL 3.31e-01 -0.177 0.181 0.05 CD4_CTL L2
ENSG00000176261 ZBTB8OS 714380 sc-eQTL 2.62e-01 -0.218 0.194 0.05 CD4_CTL L2
ENSG00000004455 AK2 284287 sc-eQTL 5.24e-01 -0.126 0.198 0.053 CD8_TEM L2
ENSG00000116497 S100PBP 548516 sc-eQTL 5.14e-01 -0.124 0.189 0.053 CD8_TEM L2
ENSG00000116514 RNF19B 400598 sc-eQTL 9.66e-01 -0.00832 0.198 0.053 CD8_TEM L2
ENSG00000116525 TRIM62 183224 sc-eQTL 3.47e-01 0.193 0.205 0.053 CD8_TEM L2
ENSG00000134684 YARS 547130 sc-eQTL 7.56e-01 -0.0538 0.173 0.053 CD8_TEM L2
ENSG00000134686 PHC2 -65769 sc-eQTL 6.28e-01 0.0932 0.192 0.053 CD8_TEM L2
ENSG00000142920 AZIN2 284179 sc-eQTL 9.48e-01 0.0112 0.173 0.053 CD8_TEM L2
ENSG00000160058 BSDC1 970552 sc-eQTL 9.68e-01 0.00804 0.203 0.053 CD8_TEM L2
ENSG00000160094 ZNF362 108791 sc-eQTL 2.43e-02 -0.436 0.192 0.053 CD8_TEM L2
ENSG00000162520 SYNC 661687 sc-eQTL 8.96e-01 0.0253 0.193 0.053 CD8_TEM L2
ENSG00000162521 RBBP4 714141 sc-eQTL 6.22e-01 -0.0853 0.173 0.053 CD8_TEM L2
ENSG00000176261 ZBTB8OS 714380 sc-eQTL 8.63e-01 0.0305 0.177 0.053 CD8_TEM L2
ENSG00000004455 AK2 284287 sc-eQTL 4.50e-01 -0.152 0.2 0.051 NK_CD56bright L2
ENSG00000116497 S100PBP 548516 sc-eQTL 8.46e-01 -0.0376 0.193 0.051 NK_CD56bright L2
ENSG00000116514 RNF19B 400598 sc-eQTL 4.11e-01 -0.154 0.187 0.051 NK_CD56bright L2
ENSG00000116525 TRIM62 183224 sc-eQTL 7.07e-02 0.361 0.199 0.051 NK_CD56bright L2
ENSG00000134684 YARS 547130 sc-eQTL 3.94e-01 -0.154 0.18 0.051 NK_CD56bright L2
ENSG00000134686 PHC2 -65769 sc-eQTL 1.21e-01 -0.28 0.18 0.051 NK_CD56bright L2
ENSG00000160058 BSDC1 970552 sc-eQTL 1.42e-01 0.296 0.201 0.051 NK_CD56bright L2
ENSG00000160094 ZNF362 108791 sc-eQTL 1.10e-01 0.329 0.205 0.051 NK_CD56bright L2
ENSG00000162520 SYNC 661687 sc-eQTL 7.46e-01 -0.0619 0.19 0.051 NK_CD56bright L2
ENSG00000162521 RBBP4 714141 sc-eQTL 2.39e-01 0.219 0.186 0.051 NK_CD56bright L2
ENSG00000176261 ZBTB8OS 714380 sc-eQTL 5.49e-01 -0.109 0.182 0.051 NK_CD56bright L2
ENSG00000004455 AK2 284287 sc-eQTL 5.82e-01 0.118 0.213 0.056 PB L2
ENSG00000116497 S100PBP 548516 sc-eQTL 1.56e-01 0.327 0.229 0.056 PB L2
ENSG00000116514 RNF19B 400598 sc-eQTL 7.32e-02 0.431 0.238 0.056 PB L2
ENSG00000116525 TRIM62 183224 sc-eQTL 5.41e-01 0.145 0.237 0.056 PB L2
ENSG00000134684 YARS 547130 sc-eQTL 3.89e-01 -0.147 0.17 0.056 PB L2
ENSG00000134686 PHC2 -65769 sc-eQTL 6.01e-01 -0.124 0.237 0.056 PB L2
ENSG00000160058 BSDC1 970552 sc-eQTL 5.52e-01 0.16 0.268 0.056 PB L2
ENSG00000160094 ZNF362 108791 sc-eQTL 1.83e-01 -0.328 0.244 0.056 PB L2
ENSG00000162520 SYNC 661687 sc-eQTL 2.07e-01 0.245 0.193 0.056 PB L2
ENSG00000162521 RBBP4 714141 sc-eQTL 7.22e-02 0.306 0.169 0.056 PB L2
ENSG00000176261 ZBTB8OS 714380 sc-eQTL 8.53e-01 0.0266 0.143 0.056 PB L2
ENSG00000004455 AK2 284287 sc-eQTL 1.41e-01 -0.354 0.239 0.055 gdT L2
ENSG00000116497 S100PBP 548516 sc-eQTL 2.18e-01 0.276 0.223 0.055 gdT L2
ENSG00000116514 RNF19B 400598 sc-eQTL 6.89e-02 -0.4 0.218 0.055 gdT L2
ENSG00000116525 TRIM62 183224 sc-eQTL 5.38e-01 0.16 0.259 0.055 gdT L2
ENSG00000134684 YARS 547130 sc-eQTL 2.90e-01 -0.262 0.246 0.055 gdT L2
ENSG00000134686 PHC2 -65769 sc-eQTL 1.26e-01 -0.331 0.215 0.055 gdT L2
ENSG00000142920 AZIN2 284179 sc-eQTL 6.85e-01 0.0904 0.222 0.055 gdT L2
ENSG00000160058 BSDC1 970552 sc-eQTL 5.27e-01 0.159 0.25 0.055 gdT L2
ENSG00000160094 ZNF362 108791 sc-eQTL 7.47e-01 0.0812 0.251 0.055 gdT L2
ENSG00000162520 SYNC 661687 sc-eQTL 2.26e-01 -0.294 0.242 0.055 gdT L2
ENSG00000162521 RBBP4 714141 sc-eQTL 8.85e-01 0.0338 0.234 0.055 gdT L2
ENSG00000176261 ZBTB8OS 714380 sc-eQTL 2.95e-01 0.267 0.254 0.055 gdT L2
ENSG00000004455 AK2 284287 sc-eQTL 3.03e-01 0.196 0.19 0.052 ncMono L2
ENSG00000116497 S100PBP 548516 sc-eQTL 8.48e-01 -0.0333 0.174 0.052 ncMono L2
ENSG00000116514 RNF19B 400598 sc-eQTL 1.87e-01 0.234 0.177 0.052 ncMono L2
ENSG00000116525 TRIM62 183224 sc-eQTL 5.82e-01 0.0973 0.176 0.052 ncMono L2
ENSG00000134684 YARS 547130 sc-eQTL 4.87e-01 0.137 0.196 0.052 ncMono L2
ENSG00000134686 PHC2 -65769 sc-eQTL 9.39e-01 0.0103 0.135 0.052 ncMono L2
ENSG00000160058 BSDC1 970552 sc-eQTL 6.28e-02 -0.359 0.192 0.052 ncMono L2
ENSG00000160094 ZNF362 108791 sc-eQTL 7.04e-01 -0.0788 0.207 0.052 ncMono L2
ENSG00000162520 SYNC 661687 sc-eQTL 8.33e-01 -0.0397 0.189 0.052 ncMono L2
ENSG00000162521 RBBP4 714141 sc-eQTL 3.27e-01 0.18 0.184 0.052 ncMono L2
ENSG00000162522 KIAA1522 623453 sc-eQTL 8.73e-01 -0.0292 0.182 0.052 ncMono L2
ENSG00000176261 ZBTB8OS 714380 sc-eQTL 6.58e-01 -0.0751 0.169 0.052 ncMono L2
ENSG00000004455 AK2 284287 sc-eQTL 5.04e-01 0.143 0.214 0.054 pDC L2
ENSG00000116497 S100PBP 548516 sc-eQTL 7.01e-01 -0.0678 0.176 0.054 pDC L2
ENSG00000116514 RNF19B 400598 sc-eQTL 7.77e-01 0.061 0.216 0.054 pDC L2
ENSG00000116525 TRIM62 183224 sc-eQTL 4.53e-01 -0.16 0.213 0.054 pDC L2
ENSG00000134684 YARS 547130 sc-eQTL 6.37e-01 -0.102 0.216 0.054 pDC L2
ENSG00000134686 PHC2 -65769 sc-eQTL 5.67e-02 -0.33 0.172 0.054 pDC L2
ENSG00000142920 AZIN2 284179 sc-eQTL 9.61e-01 -0.00741 0.15 0.054 pDC L2
ENSG00000160058 BSDC1 970552 sc-eQTL 6.94e-01 0.0815 0.207 0.054 pDC L2
ENSG00000160062 ZBTB8A 825856 sc-eQTL 3.64e-02 0.382 0.181 0.054 pDC L2
ENSG00000160094 ZNF362 108791 sc-eQTL 5.72e-01 0.106 0.187 0.054 pDC L2
ENSG00000162520 SYNC 661687 sc-eQTL 8.81e-01 0.0291 0.194 0.054 pDC L2
ENSG00000162521 RBBP4 714141 sc-eQTL 6.29e-01 0.0683 0.141 0.054 pDC L2
ENSG00000162522 KIAA1522 623453 sc-eQTL 8.80e-01 -0.0298 0.197 0.054 pDC L2
ENSG00000176261 ZBTB8OS 714380 sc-eQTL 9.63e-01 0.00958 0.206 0.054 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116497 S100PBP 548516 eQTL 0.0007 0.116 0.034 0.00268 0.0 0.0397
ENSG00000116525 TRIM62 183224 eQTL 0.00348 0.118 0.0402 0.0 0.0 0.0397
ENSG00000279179 AL662907.2 202432 eQTL 0.0778 0.0843 0.0477 0.00228 0.0 0.0397

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina