Genes within 1Mb (chr1:33362759:CTT:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000004455 AK2 281763 eQTL 9.37e-04 -0.0424 0.0128 0.0 0.0 0.437
ENSG00000121900 TMEM54 461321 eQTL 2.86e-02 0.0611 0.0279 0.0 0.0 0.437
ENSG00000121903 ZSCAN20 -109886 eQTL 3.77e-02 0.0562 0.027 0.00118 0.0 0.437
ENSG00000134686 PHC2 -68293 eQTL 7.64e-03 -0.022 0.00822 0.0019 0.0 0.437
ENSG00000142920 AZIN2 281655 eQTL 6.91e-03 0.0566 0.0209 0.0 0.0 0.437
ENSG00000160097 FNDC5 490277 eQTL 4.87e-02 -0.0776 0.0393 0.00122 0.0 0.437
ENSG00000162520 SYNC 659163 eQTL 3.09e-02 -0.0673 0.0311 0.0 0.0 0.437
ENSG00000162522 KIAA1522 620929 eQTL 4.38e-02 -0.0596 0.0295 0.0 0.0 0.437
ENSG00000184389 A3GALT2 41661 eQTL 5.27e-07 0.147 0.0291 0.0 0.0 0.437
ENSG00000222112 RN7SKP16 25895 eQTL 3.90e-03 -0.0688 0.0238 0.0 0.0 0.437
ENSG00000225313 AL513327.1 55411 eQTL 1.20e-02 0.0372 0.0148 0.0 0.0 0.437
ENSG00000278966 AL031602.1 389206 eQTL 4.02e-04 -0.124 0.0349 0.0 0.0 0.437
ENSG00000278997 AL662907.1 219529 eQTL 1.07e-03 0.105 0.0321 0.0 0.0 0.437
ENSG00000279179 AL662907.2 199908 eQTL 3.73e-03 -0.0532 0.0183 0.0 0.0 0.437


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121900 TMEM54 461321 2.66e-07 1.16e-07 3.28e-08 1.78e-07 1.02e-07 9.13e-08 1.44e-07 5.24e-08 1.45e-07 4.38e-08 1.57e-07 7.78e-08 3.18e-07 7.13e-08 5.14e-08 8.01e-08 5.1e-08 1.1e-07 5.2e-08 3.29e-08 1.03e-07 1.28e-07 1.31e-07 4.99e-08 1.37e-07 1.09e-07 1.13e-07 8.71e-08 9.88e-08 1.12e-07 1.06e-07 3.19e-08 2.75e-08 8.65e-08 9.02e-08 4.26e-08 5.64e-08 8.28e-08 8.3e-08 3.05e-08 3.18e-08 1.35e-07 4.23e-08 0.0 1.12e-07 1.78e-08 1.46e-07 4.96e-09 4.72e-08
ENSG00000142920 AZIN2 281655 2.67e-07 3.55e-07 4.98e-08 2.53e-07 9.01e-08 9.91e-08 4.14e-07 5.2e-08 8.36e-07 1.6e-07 1.03e-06 2.22e-07 2.5e-06 1.84e-07 5.69e-08 8.08e-08 4.35e-08 1.91e-07 6.92e-08 4.78e-08 1.26e-07 1.9e-07 1.45e-07 2.83e-08 7.42e-07 1.25e-07 1.13e-07 1.26e-07 1.32e-07 2.59e-07 4.53e-07 3.88e-08 2.74e-08 1.24e-07 4.78e-08 3.76e-08 5.22e-08 9.49e-08 6.45e-08 8.2e-08 3.84e-08 3.85e-07 5.24e-08 2.76e-08 8.16e-08 1.86e-08 1.24e-07 4.6e-09 4.61e-08
ENSG00000160097 FNDC5 490277 2.66e-07 1.1e-07 3.34e-08 1.78e-07 1.02e-07 9.05e-08 1.38e-07 5.29e-08 1.44e-07 4.24e-08 1.54e-07 7.75e-08 2.38e-07 6.56e-08 4.84e-08 7.87e-08 5.1e-08 1.1e-07 5.22e-08 3.15e-08 1.03e-07 1.3e-07 1.31e-07 5.01e-08 1.33e-07 1.09e-07 1.11e-07 8.71e-08 9.97e-08 1.1e-07 1.06e-07 3.19e-08 2.6e-08 8.82e-08 9.27e-08 4.26e-08 4.85e-08 8.48e-08 8.3e-08 3.12e-08 3.31e-08 1.35e-07 4.36e-08 0.0 1.12e-07 1.8e-08 1.5e-07 4.96e-09 4.72e-08
ENSG00000184389 A3GALT2 41661 4.53e-06 2.13e-05 1.37e-06 7.87e-06 8.3e-07 1.19e-06 9.3e-06 2.18e-06 5.44e-05 6.62e-06 6.15e-05 1.35e-05 0.000179 1.38e-05 1.45e-06 6.42e-06 3.46e-06 3.94e-06 1.51e-06 1.69e-06 2.68e-06 1.05e-05 4.69e-06 2.18e-06 2.06e-05 1.97e-06 2.51e-06 6.34e-06 6.2e-06 4.6e-06 4.26e-05 3.22e-07 4.55e-07 3.64e-06 2.04e-06 9.35e-07 1.78e-06 4.91e-07 5e-06 2.05e-06 6.37e-07 2.78e-05 4.01e-07 1.33e-07 4.29e-07 1.14e-06 2.28e-07 3.75e-08 1.13e-07
ENSG00000222112 RN7SKP16 25895 7.78e-06 4.46e-05 1.61e-06 1.35e-05 1.66e-06 1.92e-06 1.19e-05 2.93e-06 8.26e-05 9.31e-06 9.41e-05 2.83e-05 0.000267 2.86e-05 2.73e-06 9.01e-06 4.38e-06 6.33e-06 2.65e-06 2.83e-06 3.02e-06 1.73e-05 6.85e-06 3.75e-06 3.36e-05 2.79e-06 3.99e-06 1.04e-05 1.1e-05 7.35e-06 6.08e-05 5.25e-07 7.33e-07 5.41e-06 3.16e-06 1.11e-06 2.31e-06 5e-07 7.79e-06 3.35e-06 9.91e-07 4.91e-05 9.1e-07 2.07e-07 7.55e-07 1.07e-06 8.19e-07 2.24e-07 2.98e-07
ENSG00000225313 AL513327.1 55411 4.35e-06 1.48e-05 1.01e-06 6.07e-06 5.29e-07 7.26e-07 7.57e-06 1.8e-06 4.11e-05 5.41e-06 4.41e-05 8.71e-06 0.000146 9.68e-06 9.3e-07 4.82e-06 2.07e-06 3.53e-06 1.47e-06 1.37e-06 1.8e-06 8.24e-06 3.78e-06 1.84e-06 1.48e-05 1.36e-06 2e-06 5.26e-06 4.47e-06 4.12e-06 3.31e-05 2.83e-07 3.49e-07 3.14e-06 2.03e-06 8.73e-07 1.83e-06 3.79e-07 3.6e-06 1.42e-06 3.48e-07 2.01e-05 4.6e-07 1.38e-07 3.5e-07 6.03e-07 2.29e-07 8.93e-08 9.23e-08
ENSG00000278966 AL031602.1 389206 2.61e-07 1.35e-07 3.31e-08 1.86e-07 9.91e-08 9.32e-08 1.73e-07 5.21e-08 1.75e-07 4.94e-08 1.86e-07 9.19e-08 7.71e-07 8.15e-08 5.55e-08 7.26e-08 4.48e-08 1.18e-07 5.19e-08 3.89e-08 1.05e-07 1.27e-07 1.3e-07 4.53e-08 1.72e-07 1.13e-07 1.12e-07 9.32e-08 1.05e-07 1.07e-07 1.59e-07 3.41e-08 2.75e-08 8.23e-08 8.82e-08 4.07e-08 4.51e-08 8.78e-08 7.23e-08 3.77e-08 3.58e-08 1.46e-07 3.82e-08 0.0 1.09e-07 1.72e-08 1.44e-07 4.96e-09 4.72e-08
ENSG00000278997 AL662907.1 219529 3.1e-07 8.97e-07 8.55e-08 4.36e-07 1.03e-07 1.13e-07 6.72e-07 5.89e-08 1.78e-06 2.85e-07 1.87e-06 5.55e-07 3.49e-06 2.86e-07 1.51e-07 1.63e-07 2.34e-07 3.44e-07 1.27e-07 8.1e-08 1.39e-07 3.95e-07 1.81e-07 7.36e-08 1.85e-06 1.86e-07 1.37e-07 2.65e-07 2.31e-07 7.63e-07 7.84e-07 4.1e-08 3.3e-08 2.17e-07 3.04e-07 2.69e-08 5.76e-08 8.61e-08 6.58e-08 2.28e-08 4.57e-08 1.13e-06 3.02e-08 7.61e-09 5.19e-08 1.03e-08 1.22e-07 4.09e-09 4.74e-08
ENSG00000279179 AL662907.2 199908 3.71e-07 9.34e-07 1.04e-07 3.5e-07 1.05e-07 1.5e-07 8.7e-07 7.65e-08 1.75e-06 3.66e-07 1.98e-06 5.64e-07 5.3e-06 4.89e-07 2.81e-07 2.18e-07 4.54e-07 4.11e-07 1.93e-07 9.17e-08 1.6e-07 5.49e-07 2.26e-07 1.25e-07 2.05e-06 2.29e-07 1.83e-07 3.9e-07 3.58e-07 9.08e-07 7.64e-07 3.94e-08 3.66e-08 3.78e-07 3.52e-07 2.85e-08 8.07e-08 8.2e-08 1.14e-07 1.87e-08 4.37e-08 1.57e-06 3.37e-08 7.21e-09 3.42e-08 1.3e-08 1.2e-07 3.89e-09 4.77e-08