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Genes within 1Mb (chr1:33293295:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 212299 sc-eQTL 7.10e-01 0.08 0.215 0.059 PB L2
ENSG00000116497 S100PBP 476528 sc-eQTL 9.09e-01 0.0266 0.233 0.059 PB L2
ENSG00000116514 RNF19B 328610 sc-eQTL 9.05e-01 0.029 0.243 0.059 PB L2
ENSG00000116525 TRIM62 111236 sc-eQTL 3.00e-01 0.248 0.238 0.059 PB L2
ENSG00000134684 YARS 475142 sc-eQTL 2.54e-01 0.196 0.171 0.059 PB L2
ENSG00000134686 PHC2 -137757 sc-eQTL 7.37e-01 -0.0806 0.239 0.059 PB L2
ENSG00000160058 BSDC1 898564 sc-eQTL 2.35e-01 -0.321 0.269 0.059 PB L2
ENSG00000160094 ZNF362 36803 sc-eQTL 9.92e-01 -0.00248 0.248 0.059 PB L2
ENSG00000162520 SYNC 589699 sc-eQTL 1.19e-01 0.304 0.194 0.059 PB L2
ENSG00000162521 RBBP4 642153 sc-eQTL 6.83e-01 0.0705 0.172 0.059 PB L2
ENSG00000175130 MARCKSL1 957062 sc-eQTL 3.59e-01 0.164 0.178 0.059 PB L2
ENSG00000176261 ZBTB8OS 642392 sc-eQTL 3.20e-01 0.143 0.143 0.059 PB L2
ENSG00000004455 AK2 212299 sc-eQTL 9.95e-01 0.00131 0.217 0.054 pDC L2
ENSG00000116497 S100PBP 476528 sc-eQTL 7.50e-01 0.057 0.179 0.054 pDC L2
ENSG00000116514 RNF19B 328610 sc-eQTL 3.49e-01 -0.204 0.217 0.054 pDC L2
ENSG00000116525 TRIM62 111236 sc-eQTL 5.26e-01 0.137 0.216 0.054 pDC L2
ENSG00000134684 YARS 475142 sc-eQTL 9.47e-02 0.365 0.217 0.054 pDC L2
ENSG00000134686 PHC2 -137757 sc-eQTL 7.85e-01 0.048 0.176 0.054 pDC L2
ENSG00000142920 AZIN2 212191 sc-eQTL 5.47e-01 0.0915 0.152 0.054 pDC L2
ENSG00000160058 BSDC1 898564 sc-eQTL 7.64e-01 -0.0628 0.209 0.054 pDC L2
ENSG00000160062 ZBTB8A 753868 sc-eQTL 8.42e-01 0.037 0.186 0.054 pDC L2
ENSG00000160094 ZNF362 36803 sc-eQTL 5.51e-01 0.113 0.189 0.054 pDC L2
ENSG00000162520 SYNC 589699 sc-eQTL 6.59e-01 0.0867 0.196 0.054 pDC L2
ENSG00000162521 RBBP4 642153 sc-eQTL 6.68e-01 0.0612 0.143 0.054 pDC L2
ENSG00000162522 KIAA1522 551465 sc-eQTL 3.95e-01 0.169 0.199 0.054 pDC L2
ENSG00000175130 MARCKSL1 957062 sc-eQTL 1.69e-01 -0.178 0.129 0.054 pDC L2
ENSG00000176261 ZBTB8OS 642392 sc-eQTL 6.47e-02 -0.383 0.206 0.054 pDC L2
ENSG00000225828 FAM229A 929017 sc-eQTL 5.61e-01 -0.12 0.206 0.054 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116497 S100PBP 476528 eQTL 0.000301 0.118 0.0324 0.00881 0.00171 0.0437
ENSG00000134686 PHC2 -137757 eQTL 0.0259 0.0456 0.0204 0.00144 0.0 0.0437
ENSG00000160094 ZNF362 36803 eQTL 0.211 -0.0547 0.0437 0.00147 0.0 0.0437
ENSG00000225313 AL513327.1 -14053 eQTL 0.0121 0.0921 0.0366 0.00985 0.00162 0.0437
ENSG00000279179 AL662907.2 130444 eQTL 0.0196 0.107 0.0456 0.0 0.0 0.0437

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116525 \N 111236 4.99e-06 4.82e-06 6.05e-07 2.68e-06 8.67e-07 1.62e-06 4.58e-06 9.76e-07 4.57e-06 2.26e-06 5.67e-06 3.38e-06 7.5e-06 2.15e-06 1.43e-06 3.05e-06 2.06e-06 3.39e-06 1.38e-06 1.18e-06 2.55e-06 4.14e-06 3.78e-06 1.81e-06 7.94e-06 1.32e-06 2.51e-06 1.41e-06 4.32e-06 4.14e-06 2.73e-06 5.07e-07 5.87e-07 1.75e-06 2.24e-06 9.33e-07 8.9e-07 4.67e-07 1.31e-06 3.63e-07 2.22e-07 5.54e-06 4.02e-07 1.68e-07 3.63e-07 3.21e-07 9.92e-07 2.32e-07 1.76e-07
ENSG00000217644 \N 313348 1.24e-06 9.15e-07 1.31e-07 4.37e-07 9.93e-08 4.82e-07 1.13e-06 3.3e-07 9.42e-07 3.13e-07 1.35e-06 6.02e-07 1.53e-06 2.78e-07 4.43e-07 5.49e-07 7.79e-07 5.63e-07 3.79e-07 1.87e-07 2.54e-07 8.11e-07 6.63e-07 3.24e-07 2.11e-06 2.44e-07 6.19e-07 4.29e-07 7.61e-07 9.93e-07 5.45e-07 5.25e-08 5.39e-08 2.97e-07 4.08e-07 1.52e-07 1.12e-07 9.71e-08 8.43e-08 8.8e-09 1.01e-07 1.3e-06 5.65e-08 5.54e-09 1.48e-07 4.18e-08 1.77e-07 1.26e-08 5.93e-08
ENSG00000279179 AL662907.2 130444 4.48e-06 4.63e-06 3.28e-07 2e-06 6.3e-07 1.39e-06 3.07e-06 1.01e-06 2.81e-06 1.67e-06 4.38e-06 3.32e-06 6.37e-06 2.04e-06 9.92e-07 2.23e-06 1.57e-06 2.77e-06 1.57e-06 1.33e-06 1.67e-06 3.49e-06 3.47e-06 1.6e-06 5.75e-06 1.28e-06 2.15e-06 1.84e-06 3.82e-06 3.09e-06 1.93e-06 3.45e-07 4.8e-07 1.78e-06 1.97e-06 9.6e-07 8.44e-07 4.57e-07 1.18e-06 3.45e-07 1.51e-07 4.47e-06 3.78e-07 1.93e-07 3.27e-07 3.88e-07 7.59e-07 2.26e-07 2.02e-07