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Genes within 1Mb (chr1:33289603:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 208607 sc-eQTL 3.30e-01 -0.182 0.186 0.051 cDC L2
ENSG00000116478 HDAC1 997520 sc-eQTL 6.38e-01 -0.0867 0.184 0.051 cDC L2
ENSG00000116497 S100PBP 472836 sc-eQTL 7.31e-01 0.0677 0.197 0.051 cDC L2
ENSG00000116514 RNF19B 324918 sc-eQTL 2.56e-01 0.194 0.17 0.051 cDC L2
ENSG00000116525 TRIM62 107544 sc-eQTL 7.87e-01 0.0522 0.193 0.051 cDC L2
ENSG00000134684 YARS 471450 sc-eQTL 9.17e-01 -0.0208 0.199 0.051 cDC L2
ENSG00000134686 PHC2 -141449 sc-eQTL 6.33e-01 0.0637 0.133 0.051 cDC L2
ENSG00000142920 AZIN2 208499 sc-eQTL 8.54e-01 -0.0193 0.105 0.051 cDC L2
ENSG00000160058 BSDC1 894872 sc-eQTL 6.83e-02 -0.366 0.2 0.051 cDC L2
ENSG00000160062 ZBTB8A 750176 sc-eQTL 6.12e-01 0.0773 0.152 0.051 cDC L2
ENSG00000160094 ZNF362 33111 sc-eQTL 4.95e-01 -0.125 0.182 0.051 cDC L2
ENSG00000162520 SYNC 586007 sc-eQTL 2.98e-01 0.198 0.19 0.051 cDC L2
ENSG00000162521 RBBP4 638461 sc-eQTL 6.34e-01 0.0786 0.165 0.051 cDC L2
ENSG00000162522 KIAA1522 547773 sc-eQTL 7.07e-02 -0.332 0.183 0.051 cDC L2
ENSG00000175130 MARCKSL1 953370 sc-eQTL 6.84e-01 -0.0516 0.127 0.051 cDC L2
ENSG00000176261 ZBTB8OS 638700 sc-eQTL 2.33e-01 0.211 0.176 0.051 cDC L2
ENSG00000225828 FAM229A 925325 sc-eQTL 3.85e-01 -0.163 0.187 0.051 cDC L2
ENSG00000004455 AK2 208607 sc-eQTL 9.65e-01 0.00888 0.202 0.052 gdT L2
ENSG00000116478 HDAC1 997520 sc-eQTL 3.17e-02 -0.405 0.187 0.052 gdT L2
ENSG00000116497 S100PBP 472836 sc-eQTL 5.18e-01 -0.122 0.188 0.052 gdT L2
ENSG00000116514 RNF19B 324918 sc-eQTL 9.49e-01 -0.0119 0.185 0.052 gdT L2
ENSG00000116525 TRIM62 107544 sc-eQTL 9.64e-01 0.00971 0.217 0.052 gdT L2
ENSG00000134684 YARS 471450 sc-eQTL 3.39e-01 0.198 0.207 0.052 gdT L2
ENSG00000134686 PHC2 -141449 sc-eQTL 6.66e-01 -0.0786 0.182 0.052 gdT L2
ENSG00000142920 AZIN2 208499 sc-eQTL 4.93e-01 0.128 0.186 0.052 gdT L2
ENSG00000160058 BSDC1 894872 sc-eQTL 6.99e-01 -0.0813 0.21 0.052 gdT L2
ENSG00000160094 ZNF362 33111 sc-eQTL 8.80e-01 0.0317 0.211 0.052 gdT L2
ENSG00000162520 SYNC 586007 sc-eQTL 6.73e-02 0.372 0.202 0.052 gdT L2
ENSG00000162521 RBBP4 638461 sc-eQTL 9.23e-01 0.019 0.196 0.052 gdT L2
ENSG00000175130 MARCKSL1 953370 sc-eQTL 9.12e-02 -0.319 0.187 0.052 gdT L2
ENSG00000176261 ZBTB8OS 638700 sc-eQTL 7.88e-01 0.0574 0.213 0.052 gdT L2
ENSG00000004455 AK2 208607 sc-eQTL 7.35e-03 -0.521 0.192 0.051 pDC L2
ENSG00000116478 HDAC1 997520 sc-eQTL 4.07e-01 -0.153 0.184 0.051 pDC L2
ENSG00000116497 S100PBP 472836 sc-eQTL 5.62e-01 -0.0939 0.162 0.051 pDC L2
ENSG00000116514 RNF19B 324918 sc-eQTL 6.89e-01 -0.0793 0.198 0.051 pDC L2
ENSG00000116525 TRIM62 107544 sc-eQTL 8.77e-01 -0.0304 0.196 0.051 pDC L2
ENSG00000134684 YARS 471450 sc-eQTL 5.53e-01 -0.118 0.198 0.051 pDC L2
ENSG00000134686 PHC2 -141449 sc-eQTL 6.34e-01 0.0759 0.159 0.051 pDC L2
ENSG00000142920 AZIN2 208499 sc-eQTL 6.82e-01 0.0565 0.138 0.051 pDC L2
ENSG00000160058 BSDC1 894872 sc-eQTL 1.12e-01 -0.301 0.188 0.051 pDC L2
ENSG00000160062 ZBTB8A 750176 sc-eQTL 3.18e-02 0.359 0.166 0.051 pDC L2
ENSG00000160094 ZNF362 33111 sc-eQTL 3.94e-01 -0.146 0.171 0.051 pDC L2
ENSG00000162520 SYNC 586007 sc-eQTL 6.67e-01 -0.0766 0.178 0.051 pDC L2
ENSG00000162521 RBBP4 638461 sc-eQTL 4.71e-01 0.0931 0.129 0.051 pDC L2
ENSG00000162522 KIAA1522 547773 sc-eQTL 3.80e-01 0.158 0.18 0.051 pDC L2
ENSG00000175130 MARCKSL1 953370 sc-eQTL 4.39e-01 0.0908 0.117 0.051 pDC L2
ENSG00000176261 ZBTB8OS 638700 sc-eQTL 9.56e-01 -0.0104 0.189 0.051 pDC L2
ENSG00000225828 FAM229A 925325 sc-eQTL 8.93e-01 -0.0253 0.187 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000134686 PHC2 -141449 eQTL 0.0419 -0.048 0.0235 0.00146 0.0 0.0309
ENSG00000142920 AZIN2 208499 eQTL 0.0184 -0.141 0.0599 0.0 0.0 0.0309
ENSG00000160097 FNDC5 417121 eQTL 0.00677 0.305 0.112 0.00404 0.00137 0.0309
ENSG00000162520 SYNC 586007 eQTL 0.033 0.19 0.089 0.0 0.0 0.0309
ENSG00000162522 KIAA1522 547773 eQTL 0.0453 0.169 0.0844 0.0 0.0 0.0309
ENSG00000279179 AL662907.2 126752 eQTL 0.0398 0.108 0.0525 0.0 0.0 0.0309

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000142920 AZIN2 208499 4.54e-06 9.55e-06 7.63e-07 3.42e-06 8.54e-07 1.59e-06 4.21e-06 9.93e-07 4.83e-06 2.39e-06 6.97e-06 2.98e-06 7.53e-06 2.7e-06 1.11e-06 3.4e-06 1.84e-06 3.83e-06 1.43e-06 1.15e-06 2.23e-06 4.86e-06 3.49e-06 1.8e-06 6.24e-06 1.62e-06 2.56e-06 1.67e-06 4.15e-06 3.29e-06 2.56e-06 5.25e-07 8.14e-07 1.49e-06 2.01e-06 9.1e-07 9.13e-07 4.22e-07 1.07e-06 3.81e-07 2.56e-07 5.69e-06 5.27e-07 1.75e-07 3.87e-07 3.52e-07 8.61e-07 2.2e-07 2.79e-07
ENSG00000160097 FNDC5 417121 1.24e-06 2.57e-06 3.22e-07 1.21e-06 2.76e-07 5.15e-07 1.38e-06 4.04e-07 1.66e-06 4.52e-07 2.08e-06 1.25e-06 2.1e-06 5.79e-07 4.89e-07 8.25e-07 9.34e-07 7.94e-07 4.7e-07 6.16e-07 3.95e-07 1.6e-06 7.52e-07 5.79e-07 2.26e-06 4.27e-07 8.36e-07 9.91e-07 9.4e-07 1.06e-06 8.13e-07 1.85e-07 2.34e-07 4.04e-07 6.02e-07 4.41e-07 5.31e-07 1.15e-07 2.94e-07 1.17e-07 3.5e-08 1.49e-06 6.37e-08 2e-08 1.45e-07 9.94e-08 1.46e-07 5.66e-08 5.69e-08
ENSG00000278997 \N 146373 8.12e-06 1.39e-05 6.31e-07 5.05e-06 1.61e-06 3.41e-06 9.53e-06 1.17e-06 8.81e-06 4.43e-06 1.13e-05 5.33e-06 1.17e-05 3.63e-06 2.06e-06 4.99e-06 3.76e-06 5.27e-06 1.57e-06 2.15e-06 2.8e-06 7.6e-06 5.56e-06 1.93e-06 1.09e-05 2.21e-06 3.56e-06 3.42e-06 6.35e-06 5.88e-06 4.97e-06 4.16e-07 7.66e-07 1.96e-06 2.47e-06 1.14e-06 1.04e-06 4.39e-07 1.35e-06 6.1e-07 1.96e-07 9.44e-06 6.31e-07 1.87e-07 3.74e-07 1.19e-06 1.13e-06 4.43e-07 2.69e-07
ENSG00000279179 AL662907.2 126752 1e-05 1.62e-05 1.01e-06 6.3e-06 1.61e-06 4.22e-06 1.01e-05 1.44e-06 9.81e-06 5.09e-06 1.29e-05 5.89e-06 1.46e-05 4.19e-06 2.55e-06 6.06e-06 3.77e-06 7.14e-06 2.19e-06 2.62e-06 3.83e-06 8.98e-06 6.87e-06 1.91e-06 1.28e-05 2.8e-06 4.38e-06 4.18e-06 7.44e-06 7.61e-06 5.88e-06 4.97e-07 7.61e-07 2.61e-06 3.55e-06 1.26e-06 1.21e-06 5.57e-07 1.41e-06 8.85e-07 2.8e-07 1.23e-05 8.46e-07 1.82e-07 6.1e-07 8.79e-07 9.77e-07 6.9e-07 3.73e-07