Genes within 1Mb (chr1:33221475:G:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116497 S100PBP 404708 eQTL 7.72e-02 -0.0535 0.0302 0.00109 0.0 0.0461
ENSG00000116514 RNF19B 256790 eQTL 4.23e-02 -0.0789 0.0388 0.0 0.0 0.0461
ENSG00000134684 YARS 403322 pQTL 1.84e-02 0.0689 0.0292 0.0 0.0 0.0441
ENSG00000134686 PHC2 -209577 eQTL 7.34e-04 -0.0641 0.0189 0.00525 0.00346 0.0461
ENSG00000160094 ZNF362 -35017 eQTL 4.95e-04 -0.141 0.0403 0.0 0.0 0.0461
ENSG00000184389 A3GALT2 -99623 eQTL 9.87e-13 0.478 0.0661 0.0 0.0 0.0461
ENSG00000222112 RN7SKP16 -115389 eQTL 4.78e-02 -0.109 0.055 0.0 0.0 0.0461
ENSG00000225313 AL513327.1 -85873 eQTL 5.35e-04 0.118 0.0339 0.0 0.0 0.0461
ENSG00000278966 AL031602.1 247922 eQTL 6.72e-04 -0.274 0.0804 0.0 0.0 0.0461
ENSG00000278997 AL662907.1 78245 eQTL 4.19e-05 0.303 0.0737 0.0 0.0 0.0461
ENSG00000279179 AL662907.2 58624 eQTL 6.28e-06 -0.191 0.0419 0.00215 0.0 0.0461


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116514 RNF19B 256790 1.99e-06 2.59e-06 2.59e-07 1.25e-06 4.2e-07 6.47e-07 4.08e-06 4.22e-07 1.72e-06 6.07e-07 1.93e-06 8.26e-07 3.36e-06 5.23e-07 3.31e-07 9.45e-07 1.1e-06 1.34e-06 5.38e-07 4.58e-07 7e-07 1.96e-06 3.24e-06 5.73e-07 2.65e-06 9.68e-07 1.05e-06 9.25e-07 3.78e-06 1.47e-06 7.53e-07 3.72e-08 2.79e-07 6.78e-07 6.8e-07 4.47e-07 7.49e-07 3.23e-07 3.43e-07 7.66e-08 1.3e-07 2.2e-06 2.33e-07 1.32e-07 3.17e-07 1.27e-07 2.37e-07 8.34e-08 1.16e-07
ENSG00000134686 PHC2 -209577 3.24e-06 3.5e-06 2.74e-07 1.7e-06 4.86e-07 7.75e-07 7.6e-06 6.18e-07 1.85e-06 7.54e-07 2.77e-06 1.32e-06 4.79e-06 1.36e-06 9.73e-07 1.15e-06 1.45e-06 2.24e-06 7.13e-07 1.13e-06 9e-07 2.99e-06 4.57e-06 1e-06 3.88e-06 1.21e-06 1.15e-06 1.04e-06 4.46e-06 1.78e-06 1.82e-06 1.72e-07 3.94e-07 5.59e-07 9.03e-07 4.39e-07 7.02e-07 3.84e-07 4.78e-07 3.03e-07 2.77e-07 3.26e-06 3.77e-07 1.41e-07 4.11e-07 2.28e-07 2.3e-07 8.25e-08 2.4e-07
ENSG00000160094 ZNF362 -35017 9.7e-06 1.16e-05 1.76e-06 5.82e-06 2.28e-06 3.93e-06 5.32e-05 1.97e-06 1e-05 4.8e-06 1.3e-05 4.59e-06 2.17e-05 3.74e-06 3.71e-06 6.62e-06 6.23e-06 9.52e-06 2.63e-06 2.83e-06 5.55e-06 9.92e-06 3.64e-05 3.3e-06 1.75e-05 4.49e-06 4.77e-06 3.43e-06 4.12e-05 8.95e-06 5.69e-06 5.64e-07 1.19e-06 2.73e-06 3.99e-06 1.68e-06 1.2e-06 1.95e-06 1.36e-06 6.17e-07 6.7e-07 1.25e-05 9.07e-07 1.6e-07 7.93e-07 1.2e-06 9.43e-07 7.14e-07 4.19e-07
ENSG00000162522 \N 479645 1.26e-06 8.81e-07 9.49e-08 4.36e-07 1.18e-07 2.24e-07 1.59e-06 1.54e-07 5.3e-07 2.16e-07 1.08e-06 3.5e-07 1.1e-06 1.6e-07 2.96e-07 2e-07 5.27e-07 4.39e-07 2.88e-07 1.67e-07 2.52e-07 4.81e-07 7.79e-07 1.73e-07 1.14e-06 2.57e-07 2.71e-07 2.44e-07 1.02e-06 7.09e-07 3.66e-07 4.43e-08 5.55e-08 1.16e-07 3.42e-07 5.14e-08 1.23e-07 1.02e-07 5.28e-08 8.16e-08 5.04e-08 6.15e-07 4.59e-08 6.48e-08 1.33e-07 1.81e-08 1.05e-07 0.0 5.71e-08
ENSG00000184389 A3GALT2 -99623 5.53e-06 6.75e-06 5.86e-07 3.38e-06 1.61e-06 1.74e-06 1.96e-05 1.09e-06 4.8e-06 2.45e-06 7.76e-06 3.56e-06 1.11e-05 1.78e-06 9.83e-07 3.81e-06 2.92e-06 3.72e-06 1.57e-06 1.33e-06 2.73e-06 5.45e-06 1.21e-05 1.55e-06 9e-06 2.14e-06 2.45e-06 1.79e-06 1.48e-05 5.18e-06 2.72e-06 3.98e-07 6.32e-07 1.83e-06 2.05e-06 9.67e-07 9.25e-07 4.24e-07 1.31e-06 4.16e-07 2.29e-07 7.06e-06 3.77e-07 1.99e-07 4.54e-07 3.56e-07 7.69e-07 2.33e-07 3.24e-07
ENSG00000278966 AL031602.1 247922 2.16e-06 2.44e-06 2.84e-07 1.36e-06 4.48e-07 6.48e-07 4.25e-06 3.83e-07 1.78e-06 6.36e-07 2.05e-06 9.11e-07 3.53e-06 6.67e-07 4.19e-07 9.52e-07 9.43e-07 1.44e-06 5.57e-07 5.67e-07 6.12e-07 1.96e-06 3.48e-06 6.41e-07 2.59e-06 1.08e-06 1.03e-06 8.46e-07 4.08e-06 1.64e-06 8.48e-07 3.87e-08 3.32e-07 6.89e-07 7.4e-07 4.66e-07 6.79e-07 3.58e-07 3.79e-07 9.03e-08 1.45e-07 2.51e-06 3.01e-07 1.32e-07 2.83e-07 1.11e-07 2.26e-07 8.74e-08 1.47e-07
ENSG00000278997 AL662907.1 78245 6.54e-06 8.92e-06 7.17e-07 3.51e-06 1.73e-06 1.52e-06 2.5e-05 1.24e-06 5.25e-06 2.82e-06 8.89e-06 3.37e-06 1.26e-05 2.39e-06 1.66e-06 3.9e-06 3.7e-06 3.95e-06 1.47e-06 1.71e-06 2.51e-06 7.3e-06 1.71e-05 2e-06 1.05e-05 2.77e-06 2.55e-06 1.75e-06 1.9e-05 7.04e-06 3.74e-06 5.93e-07 5.38e-07 1.75e-06 1.97e-06 9.44e-07 9.11e-07 4.36e-07 1.06e-06 3.64e-07 2.25e-07 8.25e-06 3.65e-07 2.15e-07 6.98e-07 7.26e-07 8.71e-07 2.08e-07 4.23e-07
ENSG00000279179 AL662907.2 58624 7.77e-06 9.52e-06 1.24e-06 4.11e-06 2.27e-06 2.32e-06 3.55e-05 1.45e-06 6.96e-06 3.43e-06 1.06e-05 2.95e-06 1.56e-05 3.74e-06 2.39e-06 5.31e-06 4.08e-06 6.32e-06 2.11e-06 2.63e-06 3.73e-06 7.81e-06 2.39e-05 2.76e-06 1.27e-05 3.61e-06 3.58e-06 2.13e-06 2.73e-05 7.69e-06 4.46e-06 4.37e-07 7.99e-07 1.74e-06 2.59e-06 1.18e-06 9.63e-07 8.97e-07 8.26e-07 3.58e-07 3.2e-07 9.24e-06 4.9e-07 1.89e-07 7.73e-07 1.12e-06 1.13e-06 4.41e-07 5.97e-07